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Sed0001521 (gene) of Chayote v1 genome

Gene IDSed0001521
OrganismSechium edule (Chayote v1)
DescriptionProtein ELF4-LIKE
Genome locationLG08:7578362..7580688
RNA-Seq ExpressionSed0001521
SyntenySed0001521
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021961.1 Protein ELF4-LIKE 4 [Cucurbita argyrosperma subsp. argyrosperma]4.8e-4993.81Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGDTFSGIGS+AQID ++LQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA 
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRA
        KSDGKAG KRNRA
Subjt:  KSDGKAGLKRNRA

XP_004144022.1 protein ELF4-LIKE 4 [Cucumis sativus]1.3e-4993.86Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGDTFSG+GSS QID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA 
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRAA
        KSDGKAG KRNRAA
Subjt:  KSDGKAGLKRNRAA

XP_022147541.1 protein ELF4-LIKE 4 [Momordica charantia]2.9e-4690.18Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGDTFSG+GS AQIDG++LQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGA 
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNR
        KSDGKAG KRNR
Subjt:  KSDGKAGLKRNR

XP_022933909.1 protein ELF4-LIKE 4-like [Cucurbita moschata]4.8e-4993.81Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGDTFSGIGS+AQID ++LQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA 
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRA
        KSDGKAG KRNRA
Subjt:  KSDGKAGLKRNRA

XP_022961237.1 protein ELF4-LIKE 4-like [Cucurbita moschata]5.7e-5094.74Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGDTFSG+GSSAQID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA 
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRAA
        KSDGKAG KRNRAA
Subjt:  KSDGKAGLKRNRAA

TrEMBL top hitse value%identityAlignment
A0A0A0M235 Elf4 domain-containing protein6.1e-5093.86Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGDTFSG+GSS QID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA 
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRAA
        KSDGKAG KRNRAA
Subjt:  KSDGKAGLKRNRAA

A0A1S3BQA6 protein ELF4-LIKE 46.1e-5093.86Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGDTFSG+GSS QID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA 
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRAA
        KSDGKAG KRNRAA
Subjt:  KSDGKAGLKRNRAA

A0A5D3CFE9 Protein ELF4-LIKE 4-like isoform X26.1e-5093.86Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGDTFSG+GSS QID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA 
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRAA
        KSDGKAG KRNRAA
Subjt:  KSDGKAGLKRNRAA

A0A6J1H9N1 protein ELF4-LIKE 4-like2.7e-5094.74Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGDTFSG+GSSAQID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA 
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRAA
        KSDGKAG KRNRAA
Subjt:  KSDGKAGLKRNRAA

A0A6J1JGF0 protein ELF4-LIKE 4-like2.7e-5094.74Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGDTFSG+GSSAQID ++LQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGA 
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRAA
        KSDGKAG KRNRAA
Subjt:  KSDGKAGLKRNRAA

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 41.5e-1342.17Show/hide
Query:  DGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSG
        D  + +   +NF QVQ++LD+N+ LI ++N NH+S++ DN+++NV LI+ELN NI +VV++Y+DL+ SF+        G   G
Subjt:  DGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSG

O80877 Protein ELF4-LIKE 12.6e-1341Show/hide
Query:  EGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSME----VSSEGDSS
        E D      S+A  D  V  T    F + Q  LDQN+ LI  +N+NH S+IPDN++RNVGLI E+N NI +V+++Y+DLS +F +  +     + +GD++
Subjt:  EGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSME----VSSEGDSS

Q570U6 Protein ELF4-LIKE 42.8e-3669.91Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGD  SG G    +DG++LQ+FQK+FV VQ+ILDQN+LLI+EINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG  
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRA
        KSDGKA  KR R+
Subjt:  KSDGKAGLKRNRA

Q8S8F5 Protein ELF4-LIKE 37.7e-3475.51Show/hide
Query:  MEGDTFSG-IGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS
        MEGDT S  +GS  Q+DG++LQTF+K+FVQVQNILD N+LLI+EINQNHESKIPDNL RNVGLIRELNNN+RRV  LY DLS +F++SME SSEGDSS
Subjt:  MEGDTFSG-IGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS

Q94BS8 Protein ELF4-LIKE 22.0e-3470.75Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGD +SG G   Q+DG++LQ FQK+FVQVQ+ILDQN+LLI+EINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS SF RS++ SSEG+S+G  
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 42.0e-3769.91Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGD  SG G    +DG++LQ+FQK+FV VQ+ILDQN+LLI+EINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG  
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRA
        KSDGKA  KR R+
Subjt:  KSDGKAGLKRNRA

AT1G17455.2 ELF4-like 42.0e-3769.91Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGD  SG G    +DG++LQ+FQK+FV VQ+ILDQN+LLI+EINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF RS++ SSEG+SSG  
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKAGLKRNRA
        KSDGKA  KR R+
Subjt:  KSDGKAGLKRNRA

AT1G72630.1 ELF4-like 21.4e-3570.75Show/hide
Query:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF
        MEGD +SG G   Q+DG++LQ FQK+FVQVQ+ILDQN+LLI+EINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS SF RS++ SSEG+S+G  
Subjt:  MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAF

Query:  KSDGKA
        KSDGKA
Subjt:  KSDGKA

AT2G06255.1 ELF4-like 35.5e-3575.51Show/hide
Query:  MEGDTFSG-IGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS
        MEGDT S  +GS  Q+DG++LQTF+K+FVQVQNILD N+LLI+EINQNHESKIPDNL RNVGLIRELNNN+RRV  LY DLS +F++SME SSEGDSS
Subjt:  MEGDTFSG-IGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSS

AT2G40080.1 Protein of unknown function (DUF1313)1.1e-1442.17Show/hide
Query:  DGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSG
        D  + +   +NF QVQ++LD+N+ LI ++N NH+S++ DN+++NV LI+ELN NI +VV++Y+DL+ SF+        G   G
Subjt:  DGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTGACACATTTTCTGGGATTGGGAGTAGTGCACAGATAGATGGCAGGGTTTTACAGACATTTCAAAAGAATTTTGTTCAAGTCCAAAACATATTGGATCAAAA
CAAGCTGCTGATTAGCGAGATAAACCAAAACCACGAGTCAAAGATCCCTGATAATCTAAACAGAAATGTGGGTCTGATCAGAGAATTAAACAACAATATCAGGAGGGTTG
TTGACTTATATGCTGATCTTTCATGTTCCTTCACCAGATCCATGGAAGTTTCTTCAGAAGGTGATTCAAGTGGAGCTTTTAAATCGGATGGAAAAGCAGGCCTGAAGAGA
AACAGAGCTGCATAA
mRNA sequenceShow/hide mRNA sequence
TCTTTCAATTCCTCTCTCAAGAATTTCAAAAAAAAAAAAAAAAAAAAAAAATCCTATCTGAAGGATTGGAGAGTGAGAGGGTAGGGGCCTGTTTGGGAGATTCGTTTGAA
GCGGCGATCCCTTTTTTCTCTCTGGGTTTTTGTGTTTTTTTCCTTTTCCCCCTTTTCTTTTCACTGCTCCTCGTCCTTGGAAACCCCTCTTCTTTGTAAGGTCTCTTCAT
TTCAATCCCTCTGTATTCTTCTCTCCATCTATGATGTTCCAGATTTTCAAGAGAGGGAGCTGATTTGATAGAATTCTCATCTGTAAAAGCATGGAGGGTGACACATTTTC
TGGGATTGGGAGTAGTGCACAGATAGATGGCAGGGTTTTACAGACATTTCAAAAGAATTTTGTTCAAGTCCAAAACATATTGGATCAAAACAAGCTGCTGATTAGCGAGA
TAAACCAAAACCACGAGTCAAAGATCCCTGATAATCTAAACAGAAATGTGGGTCTGATCAGAGAATTAAACAACAATATCAGGAGGGTTGTTGACTTATATGCTGATCTT
TCATGTTCCTTCACCAGATCCATGGAAGTTTCTTCAGAAGGTGATTCAAGTGGAGCTTTTAAATCGGATGGAAAAGCAGGCCTGAAGAGAAACAGAGCTGCATAATCCAC
AAATTTCATCTTTCTCCATTCTTTTGGATCTGTGGGAGACAAGGAAAAAGCATTTCTCATCTCTGTCTAAAACAAGGCTGGTATATCAACAGATCTCTGTAACTTTCTTG
TATTATTTTTAACTATCTAGTTTTACATTTACTTAGTTCTTCATTATCCCCTCTTTTTTTGCTAATTGGAGAGAAATAATTGTCCTGATTCTGTATTGAACTGCTTTCCT
GCCTAACTGTGGACCGACTTGACCAAACTAAGCATCAAATTATCATCTGATTCCTGGTTTTGCTTCCAATTTGTATGCACTGTACTTGAAAGAATCTTGGGGTAGGTCTG
ATCACACTTGTTTCCTGTTTTAGTGATATATCTATTACTCATTTCCTGTTTTA
Protein sequenceShow/hide protein sequence
MEGDTFSGIGSSAQIDGRVLQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGAFKSDGKAGLKR
NRAA