; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001533 (gene) of Chayote v1 genome

Gene IDSed0001533
OrganismSechium edule (Chayote v1)
Descriptionrhodanese-like domain-containing protein 4, chloroplastic
Genome locationLG02:49955665..49957724
RNA-Seq ExpressionSed0001533
SyntenySed0001533
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008061 - chitin binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR036873 - Rhodanese-like domain superfamily
IPR044240 - Rhodanese-like domain-containing protein STR4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597089.1 Rhodanese-like domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.1e-5987.97Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS  SLTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA

KGN56436.1 hypothetical protein Csa_011223 [Cucumis sativus]6.9e-5985.82Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        NAQLLDIR  +E+RKVG+PD+K LGKKPV ITYKG+DKPGFLKKL LKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDGAEGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVAT
        PWLTPK  LS SSLTDAIAG FGEDSEG PAVAT
Subjt:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVAT

XP_023539430.1 rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]3.1e-5987.97Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS  SLTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA

XP_023539567.1 rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]3.1e-5987.97Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS  SLTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA

XP_038896514.1 rhodanese-like domain-containing protein 4, chloroplastic [Benincasa hispida]1.1e-5988.06Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        NAQLLDIR  VELRKVG PD+K LGKKPV ITY G+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAI DGAEGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVAT
        PWLTPKS LS SSLTDAIAG FGEDSEG PAVAT
Subjt:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVAT

TrEMBL top hitse value%identityAlignment
A0A0A0L8L6 Rhodanese domain-containing protein3.3e-5985.82Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        NAQLLDIR  +E+RKVG+PD+K LGKKPV ITYKG+DKPGFLKKL LKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDGAEGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVAT
        PWLTPK  LS SSLTDAIAG FGEDSEG PAVAT
Subjt:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVAT

A0A5A7TZ61 Rhodanese-like domain-containing protein 42.2e-5885.07Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        NAQLLDIR  VE+RKVG+PD+K LGKKPV I YKG+DKPGFLKKL LKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDGAEGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVAT
        PWLTPK  LS  SLTDAIAG FGEDSEG PAVAT
Subjt:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVAT

A0A6J1FCG4 rhodanese-like domain-containing protein 4, chloroplastic7.4e-5987.22Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPG LKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS  SLTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA

A0A6J1II89 rhodanese-like domain-containing protein 4, chloroplastic isoform X15.7e-5987.22Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS  SLTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA

A0A6J1IJ07 rhodanese-like domain-containing protein 4, chloroplastic5.7e-5987.22Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        N QLLDIR  VELRKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDG EGPRGWTNSGL
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA
        PWLTPKSPLS  SLTDAIAG  GEDSE FPAVA
Subjt:  PWLTPKSPLSFSSLTDAIAGVFGEDSEGFPAVA

SwissProt top hitse value%identityAlignment
A2X345 Protein THYLAKOID RHODANESE-LIKE, chloroplastic2.5e-3555.04Show/hide
Query:  AQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGLP
        AQL+DIR   + R+ G+PD+++  KK   + Y G+DK GFLKKL+L+FK+P+NTTL ILDK+DGNSELVAEL+  NG+KA FA+KDGAEG RGW +S LP
Subjt:  AQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGLP

Query:  WLTPKSPLSFSSLTDAIAGVFGEDSEGFP
        W  PK   S S L        G+ ++G P
Subjt:  WLTPKSPLSFSSLTDAIAGVFGEDSEGFP

Q56XR7 Rhodanese-like domain-containing protein 4A, chloroplastic8.0e-1844.21Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGW
        ++QLLDIR++  L  + SP++K LGK  V + +  +D+ GFL K+   F + +NT + +LD +DGNS  VAEL++ NGFK  + I+ GA G  GW
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGW

Q6ETQ7 Protein THYLAKOID RHODANESE-LIKE, chloroplastic2.5e-3555.04Show/hide
Query:  AQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGLP
        AQL+DIR   + R+ G+PD+++  KK   + Y G+DK GFLKKL+L+FK+P+NTTL ILDK+DGNSELVAEL+  NG+KA FA+KDGAEG RGW +S LP
Subjt:  AQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGLP

Query:  WLTPKSPLSFSSLTDAIAGVFGEDSEGFP
        W  PK   S S L        G+ ++G P
Subjt:  WLTPKSPLSFSSLTDAIAGVFGEDSEGFP

Q9M158 Rhodanese-like domain-containing protein 4, chloroplastic2.6e-4870.77Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        NAQLLDIR   + R+VGSP+IK LGKK V   Y G+DKPGFLKKL+LKFK+P+NTTL+ILDK+DGNSELVAEL+ +NGFK+ +AIKDGAEGPRGW NS L
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLS--FSSLTDAIAGVFGEDSEG
        PW+ PK  LS   SSLTD+I+GVFGE S+G
Subjt:  PWLTPKSPLS--FSSLTDAIAGVFGEDSEG

Arabidopsis top hitse value%identityAlignment
AT3G25480.1 Rhodanese/Cell cycle control phosphatase superfamily protein5.7e-1944.21Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGW
        ++QLLDIR++  L  + SP++K LGK  V + +  +D+ GFL K+   F + +NT + +LD +DGNS  VAEL++ NGFK  + I+ GA G  GW
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGW

AT4G01050.1 thylakoid rhodanese-like1.8e-4970.77Show/hide
Query:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL
        NAQLLDIR   + R+VGSP+IK LGKK V   Y G+DKPGFLKKL+LKFK+P+NTTL+ILDK+DGNSELVAEL+ +NGFK+ +AIKDGAEGPRGW NS L
Subjt:  NAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGL

Query:  PWLTPKSPLS--FSSLTDAIAGVFGEDSEG
        PW+ PK  LS   SSLTD+I+GVFGE S+G
Subjt:  PWLTPKSPLS--FSSLTDAIAGVFGEDSEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCTCAACTACTTGATATTAGAGAGCTGGTTGAACTTAGGAAAGTAGGTAGCCCTGATATTAAAAAGTTGGGCAAAAAGCCTGTGGTTATTACTTACAAAGGTGA
CGATAAGCCTGGTTTCTTGAAGAAGCTTGCTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATCTTGGACAAATATGATGGGAACTCTGAACTCGTCGCAGAGT
TGATCGTTGTAAATGGATTCAAAGCTACTTTTGCAATTAAAGATGGTGCAGAAGGACCTCGTGGATGGACGAATAGTGGTCTTCCTTGGTTAACACCAAAGTCACCTTTG
AGTTTTAGCAGTCTAACAGATGCTATTGCTGGTGTGTTTGGAGAGGATTCTGAAGGTTTCCCTGCTGTTGCTACTGTGCAATATGTTGATTGTGTGATGGATACAATGGA
AAAACAAACAAACAACAATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCTCAACTACTTGATATTAGAGAGCTGGTTGAACTTAGGAAAGTAGGTAGCCCTGATATTAAAAAGTTGGGCAAAAAGCCTGTGGTTATTACTTACAAAGGTGA
CGATAAGCCTGGTTTCTTGAAGAAGCTTGCTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATCTTGGACAAATATGATGGGAACTCTGAACTCGTCGCAGAGT
TGATCGTTGTAAATGGATTCAAAGCTACTTTTGCAATTAAAGATGGTGCAGAAGGACCTCGTGGATGGACGAATAGTGGTCTTCCTTGGTTAACACCAAAGTCACCTTTG
AGTTTTAGCAGTCTAACAGATGCTATTGCTGGTGTGTTTGGAGAGGATTCTGAAGGTTTCCCTGCTGTTGCTACTGTGCAATATGTTGATTGTGTGATGGATACAATGGA
AAAACAAACAAACAACAATATTTGA
Protein sequenceShow/hide protein sequence
MNAQLLDIRELVELRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPRGWTNSGLPWLTPKSPL
SFSSLTDAIAGVFGEDSEGFPAVATVQYVDCVMDTMEKQTNNNI