; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001557 (gene) of Chayote v1 genome

Gene IDSed0001557
OrganismSechium edule (Chayote v1)
Description18S pre-ribosomal assembly protein gar2-related
Genome locationLG03:17103997..17107913
RNA-Seq ExpressionSed0001557
SyntenySed0001557
Gene Ontology termsGO:0009786 - regulation of asymmetric cell division (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585259.1 hypothetical protein SDJN03_17992, partial [Cucurbita argyrosperma subsp. sororia]1.1e-13167.23Show/hide
Query:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG
        +SI+PIG   +EKINHEDAIQ                                         SS+SYVDKSV+ECQMSK IVCDKE NVNDVKDICIDEG
Subjt:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG

Query:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD
        V SL NF FRSTDEKS YK LPL QNEGSIKEQKNSSE LESI D KKISLED+FA DWST HNDAKDL QIEEAKL+ SEPQV V+KLVR SH SESLD
Subjt:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD

Query:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG
          G++IS EKA  +DPA A KSVESCN NS     AESP++NIPT H S  N++FE  S  LN NSISP+AN  EEH  N NS+YP PM       E  G
Subjt:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG

Query:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
        + DS  GTQVST        GRL+ SQT +D GESSFSA+DPLASLVTYSGPIAYSGS+SLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
Subjt:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY

Query:  RGWREGLLCCRF
        RGWREGLLCCRF
Subjt:  RGWREGLLCCRF

XP_023002043.1 uncharacterized protein LOC111496042 isoform X1 [Cucurbita maxima]2.3e-12966.26Show/hide
Query:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG
        +SI+PIG   +EKINHEDAIQ                                         SS+SYVDKSV+ECQMSK IVCDKE NVNDVKDICIDEG
Subjt:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG

Query:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD
        V SL NF FRSTDEKS YK LPL QNEGS+KEQKNSSE LESI D KKISLED+FA DWST HNDAKDL QIEEAKL+ SEPQV V+KLVR SH SESLD
Subjt:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD

Query:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG
          G++IS EKAN +DPA A KSVESCN NS L   AES ++NIPT H S  N++FE  S  LN NSISP+AN  EEH  N   ++P PM       E  G
Subjt:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG

Query:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
        + DS  GTQVST         RL+ SQT +D GESSFSA+DPLASLVTYSGPIAYSGS+SLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
Subjt:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY

Query:  RGWREGLLCCRF
        RGWREGLLCCRF
Subjt:  RGWREGLLCCRF

XP_023538554.1 uncharacterized protein LOC111799296 isoform X1 [Cucurbita pepo subsp. pepo]6.0e-13066.75Show/hide
Query:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG
        +SI+PIG   QEKINHEDAIQ                                         SS+SYVDKSV+ECQMSK IVCDKE NVNDVKDICIDEG
Subjt:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG

Query:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD
        V SL NF FRSTDEKS YK LPL QNEGSIKEQKNSSE LESI D KKISLED+FA DWST HNDAKDL QIEEAKL+ SEPQV V+KLVR SH SESLD
Subjt:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD

Query:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEP-------MEGCG
          G++IS EK N +DPA A K VESCN NS L   AESP++NIPT H S  N++FE  S  LN NSISP+AN  EE   N NS+YP P        E  G
Subjt:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEP-------MEGCG

Query:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
        + DS  GTQVST         RL+ SQT +D GESSFSA+DPLASLVTYSGPIAYSGS+SLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
Subjt:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY

Query:  RGWREGLLCCRF
        RGWREGLLCCRF
Subjt:  RGWREGLLCCRF

XP_023538556.1 uncharacterized protein LOC111799296 isoform X2 [Cucurbita pepo subsp. pepo]6.0e-13066.75Show/hide
Query:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG
        +SI+PIG   QEKINHEDAIQ                                         SS+SYVDKSV+ECQMSK IVCDKE NVNDVKDICIDEG
Subjt:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG

Query:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD
        V SL NF FRSTDEKS YK LPL QNEGSIKEQKNSSE LESI D KKISLED+FA DWST HNDAKDL QIEEAKL+ SEPQV V+KLVR SH SESLD
Subjt:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD

Query:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEP-------MEGCG
          G++IS EK N +DPA A K VESCN NS L   AESP++NIPT H S  N++FE  S  LN NSISP+AN  EE   N NS+YP P        E  G
Subjt:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEP-------MEGCG

Query:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
        + DS  GTQVST         RL+ SQT +D GESSFSA+DPLASLVTYSGPIAYSGS+SLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
Subjt:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY

Query:  RGWREGLLCCRF
        RGWREGLLCCRF
Subjt:  RGWREGLLCCRF

XP_038886032.1 uncharacterized protein LOC120076323 [Benincasa hispida]3.5e-13065.22Show/hide
Query:  MSINPIGFSFQEKINHEDAIQSSN-----------------------------------------SYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG
        MS NPIG S QEKIN ED IQSS                                          SYVDKSV ECQ+SKTIVCD+E NVNDVKDICIDEG
Subjt:  MSINPIGFSFQEKINHEDAIQSSN-----------------------------------------SYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG

Query:  VSSLDNFFFRSTDEKSIYKILPLA--QNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSES
        VSSLDNFFF+ T+EKSI KI+PL   QNEGSIKE++NSSE  + I D  K+ LED+FAM+W+T H+DAKDL QIEE K +LSEP+V ++KLV+RS+ SES
Subjt:  VSSLDNFFFRSTDEKSIYKILPLA--QNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSES

Query:  LDYTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSD-NIPTHASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPMEGCG-----
        LD   V+ISGEK N +DP++ASKSVESCNG   L   A+ P+D NIPTH S   ++ EN S  LNFNSISPVAN GEEH  N N NYP PM         
Subjt:  LDYTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSD-NIPTHASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPMEGCG-----

Query:  --NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYR
            DSVIGTQVST LE RTSD RLV +Q+ +DIGESSFSAVDPLASLVTYSGPIAYSGS+SLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYR
Subjt:  --NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYR

Query:  KYRGWREGLLCCRF
        KYRGWREGLLCC+F
Subjt:  KYRGWREGLLCCRF

TrEMBL top hitse value%identityAlignment
A0A0A0KFP8 Uncharacterized protein1.1e-12963.88Show/hide
Query:  MSINPIGFSFQEKINHEDAIQSSN------------------------------------------SYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDE
        M+ NP G SFQ+KIN E+ +QSS+                                          SYVDKSV+ECQMSKTIVCD+E NVNDVKDICID+
Subjt:  MSINPIGFSFQEKINHEDAIQSSN------------------------------------------SYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDE

Query:  GVSSLDNFFFRSTDEKSIYKILPLAQ--NEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSE
        GV+SL+NFFF+ST EKSI KI PL +  NEGSIKE++ SSE  + I D +K+SLED+FAMDW+T HNDAKDL QIEE KL+LSEP++ ++KLV+RS+ SE
Subjt:  GVSSLDNFFFRSTDEKSIYKILPLAQ--NEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSE

Query:  SLDYTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPTHASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPMEGCGNKDSV
        SLD  G++ISGEK N +DP+ ASKSV+SCN    LD  AE P DNIP H S +N +FEN S AL FNSISPVAN GEE +           E CG  DSV
Subjt:  SLDYTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPTHASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPMEGCGNKDSV

Query:  IGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWRE
        IGTQV T LE+RTSD RL+ SQ  +DIGESSFSAVDPLASLVTYSGP+AYSGS+SLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWRE
Subjt:  IGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWRE

Query:  GLLCCRF
        GLLCC+F
Subjt:  GLLCCRF

A0A6J1GGY0 uncharacterized protein LOC111454119 isoform X12.5e-12966.59Show/hide
Query:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG
        +SI+PIG   +EKINHEDAIQ                                         SS+SYVDKSV+ECQMS  IVCDKE NVNDVKDICIDEG
Subjt:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG

Query:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD
        V SL NF FRSTDEKS YK LPL QNEGSIKEQKNSSE LESI D KKISLED+FA DWST HNDAKDL QIEEAKL+ SEPQV V+KLVR SH SESLD
Subjt:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD

Query:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG
          G++IS EKAN +DPA A KSVESCN NS L   AESP++NIPT   S  N++FE  S  LN NSISP+ N  EEH  N NS+YP PM       E  G
Subjt:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG

Query:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPIL-QSEWNSSPVKMVKAERRHYRK
        + DS  GTQVST         RL+ SQT +D GESSFSA+DPLASLVTYSGPIAYSGS+SLRSESSTTSTRSFAFPIL QSEWNSSPVKMVKAERRHYRK
Subjt:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPIL-QSEWNSSPVKMVKAERRHYRK

Query:  YRGWREGLLCCRF
        YRGWREGLLCCRF
Subjt:  YRGWREGLLCCRF

A0A6J1GH17 uncharacterized protein LOC111454119 isoform X22.5e-12966.59Show/hide
Query:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG
        +SI+PIG   +EKINHEDAIQ                                         SS+SYVDKSV+ECQMS  IVCDKE NVNDVKDICIDEG
Subjt:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG

Query:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD
        V SL NF FRSTDEKS YK LPL QNEGSIKEQKNSSE LESI D KKISLED+FA DWST HNDAKDL QIEEAKL+ SEPQV V+KLVR SH SESLD
Subjt:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD

Query:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG
          G++IS EKAN +DPA A KSVESCN NS L   AESP++NIPT   S  N++FE  S  LN NSISP+ N  EEH  N NS+YP PM       E  G
Subjt:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG

Query:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPIL-QSEWNSSPVKMVKAERRHYRK
        + DS  GTQVST         RL+ SQT +D GESSFSA+DPLASLVTYSGPIAYSGS+SLRSESSTTSTRSFAFPIL QSEWNSSPVKMVKAERRHYRK
Subjt:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPIL-QSEWNSSPVKMVKAERRHYRK

Query:  YRGWREGLLCCRF
        YRGWREGLLCCRF
Subjt:  YRGWREGLLCCRF

A0A6J1KID4 uncharacterized protein LOC111496042 isoform X21.1e-12966.26Show/hide
Query:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG
        +SI+PIG   +EKINHEDAIQ                                         SS+SYVDKSV+ECQMSK IVCDKE NVNDVKDICIDEG
Subjt:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG

Query:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD
        V SL NF FRSTDEKS YK LPL QNEGS+KEQKNSSE LESI D KKISLED+FA DWST HNDAKDL QIEEAKL+ SEPQV V+KLVR SH SESLD
Subjt:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD

Query:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG
          G++IS EKAN +DPA A KSVESCN NS L   AES ++NIPT H S  N++FE  S  LN NSISP+AN  EEH  N   ++P PM       E  G
Subjt:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG

Query:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
        + DS  GTQVST         RL+ SQT +D GESSFSA+DPLASLVTYSGPIAYSGS+SLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
Subjt:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY

Query:  RGWREGLLCCRF
        RGWREGLLCCRF
Subjt:  RGWREGLLCCRF

A0A6J1KPB6 uncharacterized protein LOC111496042 isoform X11.1e-12966.26Show/hide
Query:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG
        +SI+PIG   +EKINHEDAIQ                                         SS+SYVDKSV+ECQMSK IVCDKE NVNDVKDICIDEG
Subjt:  MSINPIGFSFQEKINHEDAIQ-----------------------------------------SSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEG

Query:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD
        V SL NF FRSTDEKS YK LPL QNEGS+KEQKNSSE LESI D KKISLED+FA DWST HNDAKDL QIEEAKL+ SEPQV V+KLVR SH SESLD
Subjt:  VSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLD

Query:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG
          G++IS EKAN +DPA A KSVESCN NS L   AES ++NIPT H S  N++FE  S  LN NSISP+AN  EEH  N   ++P PM       E  G
Subjt:  YTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPT-HASDFNHDFENESFALNFNSISPVANDGEEHKVNTNSNYPEPM-------EGCG

Query:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
        + DS  GTQVST         RL+ SQT +D GESSFSA+DPLASLVTYSGPIAYSGS+SLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY
Subjt:  NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKY

Query:  RGWREGLLCCRF
        RGWREGLLCCRF
Subjt:  RGWREGLLCCRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13650.2 BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4)2.1e-1148.1Show/hide
Query:  DGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYR
        D  L+    PN  GE SF         +TY GP++ S ++S+RS+   TS  SFA PILQSEWNSSPV+M KAE    R
Subjt:  DGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYR

AT2G03810.1 18S pre-ribosomal assembly protein gar2-related2.9e-2932.23Show/hide
Query:  YVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEGVSSLDNFFFRSTD---EKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHH
        Y+DK+V  C + + +VC KE   + VKDIC+DEGV   + F F   D     S   ++   +   +  E K++ +++  + D++     D+   D     
Subjt:  YVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEGVSSLDNFFFRSTD---EKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHH

Query:  NDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLDYTGVEISGEKANWKDPAMASK---SVESCNGNSTLDYVAESPSDNIPTHASDFNHD------F
        +  +D    E    + ++  + V + V+ S  +  L  + +E      N KD    S+   S E       L    E  S N    +SD + +       
Subjt:  NDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLDYTGVEISGEKANWKDPAMASK---SVESCNGNSTLDYVAESPSDNIPTHASDFNHD------F

Query:  ENESFALNFNSISPVANDGEEHK--------VNTNSNYPEPMEGCG---NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVD--PLASLVTY
        + E  +L   +I       EE K        V+T ++  EP + C      ++    Q +  +E    D +   S+     GE+SFSA D   ++  +TY
Subjt:  ENESFALNFNSISPVANDGEEHK--------VNTNSNYPEPMEGCG---NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVD--PLASLVTY

Query:  SGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF
        SGPIAYSGS+S+RS++STTS RSFAFPILQSEWNSSPV+M KA++R  R+  GWR  LLCCRF
Subjt:  SGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF

AT2G03810.2 18S pre-ribosomal assembly protein gar2-related2.9e-2932.23Show/hide
Query:  YVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEGVSSLDNFFFRSTD---EKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHH
        Y+DK+V  C + + +VC KE   + VKDIC+DEGV   + F F   D     S   ++   +   +  E K++ +++  + D++     D+   D     
Subjt:  YVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEGVSSLDNFFFRSTD---EKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHH

Query:  NDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLDYTGVEISGEKANWKDPAMASK---SVESCNGNSTLDYVAESPSDNIPTHASDFNHD------F
        +  +D    E    + ++  + V + V+ S  +  L  + +E      N KD    S+   S E       L    E  S N    +SD + +       
Subjt:  NDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLDYTGVEISGEKANWKDPAMASK---SVESCNGNSTLDYVAESPSDNIPTHASDFNHD------F

Query:  ENESFALNFNSISPVANDGEEHK--------VNTNSNYPEPMEGCG---NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVD--PLASLVTY
        + E  +L   +I       EE K        V+T ++  EP + C      ++    Q +  +E    D +   S+     GE+SFSA D   ++  +TY
Subjt:  ENESFALNFNSISPVANDGEEHK--------VNTNSNYPEPMEGCG---NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVD--PLASLVTY

Query:  SGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF
        SGPIAYSGS+S+RS++STTS RSFAFPILQSEWNSSPV+M KA++R  R+  GWR  LLCCRF
Subjt:  SGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF

AT2G03810.3 18S pre-ribosomal assembly protein gar2-related2.9e-2932.23Show/hide
Query:  YVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEGVSSLDNFFFRSTD---EKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHH
        Y+DK+V  C + + +VC KE   + VKDIC+DEGV   + F F   D     S   ++   +   +  E K++ +++  + D++     D+   D     
Subjt:  YVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEGVSSLDNFFFRSTD---EKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHH

Query:  NDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLDYTGVEISGEKANWKDPAMASK---SVESCNGNSTLDYVAESPSDNIPTHASDFNHD------F
        +  +D    E    + ++  + V + V+ S  +  L  + +E      N KD    S+   S E       L    E  S N    +SD + +       
Subjt:  NDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLDYTGVEISGEKANWKDPAMASK---SVESCNGNSTLDYVAESPSDNIPTHASDFNHD------F

Query:  ENESFALNFNSISPVANDGEEHK--------VNTNSNYPEPMEGCG---NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVD--PLASLVTY
        + E  +L   +I       EE K        V+T ++  EP + C      ++    Q +  +E    D +   S+     GE+SFSA D   ++  +TY
Subjt:  ENESFALNFNSISPVANDGEEHK--------VNTNSNYPEPMEGCG---NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVD--PLASLVTY

Query:  SGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF
        SGPIAYSGS+S+RS++STTS RSFAFPILQSEWNSSPV+M KA++R  R+  GWR  LLCCRF
Subjt:  SGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF

AT2G03810.4 18S pre-ribosomal assembly protein gar2-related2.9e-2932.23Show/hide
Query:  YVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEGVSSLDNFFFRSTD---EKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHH
        Y+DK+V  C + + +VC KE   + VKDIC+DEGV   + F F   D     S   ++   +   +  E K++ +++  + D++     D+   D     
Subjt:  YVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEGVSSLDNFFFRSTD---EKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISLEDYFAMDWSTHH

Query:  NDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLDYTGVEISGEKANWKDPAMASK---SVESCNGNSTLDYVAESPSDNIPTHASDFNHD------F
        +  +D    E    + ++  + V + V+ S  +  L  + +E      N KD    S+   S E       L    E  S N    +SD + +       
Subjt:  NDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLDYTGVEISGEKANWKDPAMASK---SVESCNGNSTLDYVAESPSDNIPTHASDFNHD------F

Query:  ENESFALNFNSISPVANDGEEHK--------VNTNSNYPEPMEGCG---NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVD--PLASLVTY
        + E  +L   +I       EE K        V+T ++  EP + C      ++    Q +  +E    D +   S+     GE+SFSA D   ++  +TY
Subjt:  ENESFALNFNSISPVANDGEEHK--------VNTNSNYPEPMEGCG---NKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVD--PLASLVTY

Query:  SGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF
        SGPIAYSGS+S+RS++STTS RSFAFPILQSEWNSSPV+M KA++R  R+  GWR  LLCCRF
Subjt:  SGPIAYSGSVSLRSESSTTSTRSFAFPILQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATCAACCCAATTGGTTTCTCATTTCAAGAGAAGATTAACCATGAGGATGCCATTCAATCTTCAAACTCATACGTGGACAAAAGTGTGTTGGAATGTCAAATGTC
AAAAACAATAGTATGTGACAAAGAACCTAATGTCAATGATGTTAAGGACATCTGCATTGATGAAGGAGTGTCCTCCTTGGACAATTTCTTCTTTCGGAGTACGGATGAGA
AGTCGATCTACAAAATCCTGCCTCTGGCCCAAAATGAAGGTTCTATTAAAGAACAAAAGAACTCTTCTGAGGCGTTAGAGTCGATCCCAGATGCTAAAAAAATCTCTTTA
GAAGATTACTTTGCCATGGACTGGAGTACTCATCATAATGATGCTAAGGATTTGAAACAGATAGAGGAAGCAAAACTCGATCTAAGCGAGCCACAAGTTTCAGTGGAAAA
GCTAGTTAGAAGAAGTCACTACTCCGAGTCTTTAGACTACACAGGCGTTGAGATATCTGGTGAAAAAGCCAACTGGAAAGACCCTGCTATGGCTTCCAAATCTGTTGAAT
CTTGCAATGGCAATTCTACTCTGGATTATGTGGCAGAATCACCAAGTGATAACATCCCAACACATGCTTCAGATTTTAATCATGATTTTGAGAATGAAAGTTTTGCATTG
AATTTCAATTCGATCTCTCCCGTGGCCAACGATGGAGAAGAACACAAGGTAAATACCAACTCAAACTATCCAGAACCTATGGAGGGTTGTGGAAATAAGGATTCTGTGAT
TGGAACCCAAGTTTCAACCGGTCTGGAATTTAGGACTTCGGATGGTCGATTAGTTCCAAGTCAAACCCCGAACGACATTGGCGAGTCTAGTTTCTCTGCTGTAGATCCAT
TAGCTAGTCTTGTTACTTACTCAGGGCCAATAGCTTATTCTGGAAGTGTCTCTCTTCGATCCGAAAGTAGCACAACAAGCACACGTTCTTTTGCCTTTCCCATATTGCAG
TCTGAATGGAATAGTAGCCCGGTTAAAATGGTAAAAGCCGAACGGAGGCATTACCGGAAGTATAGAGGTTGGAGGGAGGGGCTTCTATGTTGCAGATTCTGA
mRNA sequenceShow/hide mRNA sequence
CCACCCCCGTGCCACGTGTCAATCCCTAATAAAAAAAAGCCAACCTGGACACAGAGATCATATTGCATCCAAAATCCAACGGCCAAACTCCAAGAGTAAGGAATTGAAAC
GTAGGCACGACCGCGTGGGATCATCATCCCCCCTCCATTGTCCATAAATGTATGAAATGTGGGCCCCCACTCAGTTGCATAAAAATTAAAAAAAATCATTTAATTCATTA
GTTGAAAGAAAGAAAGAAGAAGAAGTGGGAGTCTGAAGGAGCTACTCGCCGGCGTTGAAGTTCAATTTCCGGCTAGAATACGGCAGCCCGTATTTGATCTGAAACAATCG
GAAGAAACTGTGGAAAAATTCAGTCACAGAAGTTTACAGTTTGCTTAAGGATGGCTCCTATCTGCTGACTGTGGCATGTTCATGCAGTCTTCTCTGAAGTAGTTTGATTA
TATTCATGATCAATTTGCCCCCATGGATTTTGTTATAACTATGAAGCTTGACTAAAGTGACCATCCGTTTTACCCTTCAATAACCAGCCCAAATTGTGGTCCAGAATCGA
TCGAATGCAGTTGCGGTACTGAGTTGCGATATCAGATCATGAGTATCAACCCAATTGGTTTCTCATTTCAAGAGAAGATTAACCATGAGGATGCCATTCAATCTTCAAAC
TCATACGTGGACAAAAGTGTGTTGGAATGTCAAATGTCAAAAACAATAGTATGTGACAAAGAACCTAATGTCAATGATGTTAAGGACATCTGCATTGATGAAGGAGTGTC
CTCCTTGGACAATTTCTTCTTTCGGAGTACGGATGAGAAGTCGATCTACAAAATCCTGCCTCTGGCCCAAAATGAAGGTTCTATTAAAGAACAAAAGAACTCTTCTGAGG
CGTTAGAGTCGATCCCAGATGCTAAAAAAATCTCTTTAGAAGATTACTTTGCCATGGACTGGAGTACTCATCATAATGATGCTAAGGATTTGAAACAGATAGAGGAAGCA
AAACTCGATCTAAGCGAGCCACAAGTTTCAGTGGAAAAGCTAGTTAGAAGAAGTCACTACTCCGAGTCTTTAGACTACACAGGCGTTGAGATATCTGGTGAAAAAGCCAA
CTGGAAAGACCCTGCTATGGCTTCCAAATCTGTTGAATCTTGCAATGGCAATTCTACTCTGGATTATGTGGCAGAATCACCAAGTGATAACATCCCAACACATGCTTCAG
ATTTTAATCATGATTTTGAGAATGAAAGTTTTGCATTGAATTTCAATTCGATCTCTCCCGTGGCCAACGATGGAGAAGAACACAAGGTAAATACCAACTCAAACTATCCA
GAACCTATGGAGGGTTGTGGAAATAAGGATTCTGTGATTGGAACCCAAGTTTCAACCGGTCTGGAATTTAGGACTTCGGATGGTCGATTAGTTCCAAGTCAAACCCCGAA
CGACATTGGCGAGTCTAGTTTCTCTGCTGTAGATCCATTAGCTAGTCTTGTTACTTACTCAGGGCCAATAGCTTATTCTGGAAGTGTCTCTCTTCGATCCGAAAGTAGCA
CAACAAGCACACGTTCTTTTGCCTTTCCCATATTGCAGTCTGAATGGAATAGTAGCCCGGTTAAAATGGTAAAAGCCGAACGGAGGCATTACCGGAAGTATAGAGGTTGG
AGGGAGGGGCTTCTATGTTGCAGATTCTGAGTGCTTTCTTTGCTATCAGTAGACTTAGACTCTGTTTGGGCATCATCAAAATTTGTCTTCATACACGTGTAAGTAGATGT
ATTATTTTACTGGAGGCTGTTACCTGTGACATTACTCCTTCGATGTCTCCGGTGTCTGGCCTAGGGACGAGCGTGGTTACCTTGTTTCAAAATTTTTTTTACTGGAGGCT
GTGCATTTCATTCATAGTCATTCTTTACAGTTTGGCCTATTATGTGAACTTACCTCATCTCTCTCTTTCTCTCTGATTTCCAATCACTCATTCATATAGTTCTGTGATTC
GTATTAGAATGATATGATATGATATTGTGGCCATC
Protein sequenceShow/hide protein sequence
MSINPIGFSFQEKINHEDAIQSSNSYVDKSVLECQMSKTIVCDKEPNVNDVKDICIDEGVSSLDNFFFRSTDEKSIYKILPLAQNEGSIKEQKNSSEALESIPDAKKISL
EDYFAMDWSTHHNDAKDLKQIEEAKLDLSEPQVSVEKLVRRSHYSESLDYTGVEISGEKANWKDPAMASKSVESCNGNSTLDYVAESPSDNIPTHASDFNHDFENESFAL
NFNSISPVANDGEEHKVNTNSNYPEPMEGCGNKDSVIGTQVSTGLEFRTSDGRLVPSQTPNDIGESSFSAVDPLASLVTYSGPIAYSGSVSLRSESSTTSTRSFAFPILQ
SEWNSSPVKMVKAERRHYRKYRGWREGLLCCRF