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Sed0001563 (gene) of Chayote v1 genome

Gene IDSed0001563
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:18572961..18574133
RNA-Seq ExpressionSed0001563
SyntenySed0001563
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5070516.1 hypothetical protein JHK85_002893 [Glycine max]3.4e-7888.1Show/hide
Query:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILY
        MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH       QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILY
Subjt:  MSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILY

Query:  LPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT
        LPTCVGFGYRYPFVEGRSSFSWEYGM YFSAVAPGTRTLAR            GAPCVLEPITIFRLT
Subjt:  LPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT

KAG9455494.1 hypothetical protein H6P81_000002 [Aristolochia fimbriata]1.3e-8275.23Show/hide
Query:  VKLPSAFALEGQ-----------------SPSGPRKPLHASV--QVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRR
        VKLPSAFALEG                   P+  R  L  +V   VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRR
Subjt:  VKLPSAFALEGQ-----------------SPSGPRKPLHASV--QVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRR

Query:  LPCHQ------------------------TCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEY
        LPCHQ                        TCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEY
Subjt:  LPCHQ------------------------TCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEY

Query:  GMGYFSAVAPGTRTLARG
        GMGYFSAVAPGTRTLARG
Subjt:  GMGYFSAVAPGTRTLARG

OIV89924.1 hypothetical protein TanjilG_08301 [Lupinus angustifolius]1.2e-8388.7Show/hide
Query:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
        V VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH       QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
Subjt:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES

Query:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT
        CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR            GAPCVLEPITIFRLT
Subjt:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT

PPR91547.1 hypothetical protein GOBAR_AA29147 [Gossypium barbadense]4.5e-8388.14Show/hide
Query:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
        V+VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH       QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
Subjt:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES

Query:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT
        CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEY MGYFSAVAPGTRTLAR            GAPCVLEPITIFRLT
Subjt:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT

TXG46680.1 hypothetical protein EZV62_027835 [Acer yangbiense]1.6e-8388.7Show/hide
Query:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
        VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH       QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
Subjt:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES

Query:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT
        CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEY MGYFSAVAPGTRTLAR            GAPCVLEPITIFRLT
Subjt:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT

TrEMBL top hitse value%identityAlignment
A0A2N9HR91 Uncharacterized protein1.7e-8389.14Show/hide
Query:  VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCL
        VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH       QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCL
Subjt:  VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCL

Query:  APLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT
        APLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR            GAPCVLEPITIFRLT
Subjt:  APLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT

A0A2N9IAE2 Uncharacterized protein8.9e-8580.5Show/hide
Query:  VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQT-------------------------CVFGKQSPGPGHCD
        VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQ                          C FGKQSPGPGHCD
Subjt:  VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQT-------------------------CVFGKQSPGPGHCD

Query:  PLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT
        PLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR            GAPCVLEPITIFRLT
Subjt:  PLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT

A0A2P5WKC4 Uncharacterized protein2.2e-8388.14Show/hide
Query:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
        V+VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH       QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
Subjt:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES

Query:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT
        CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEY MGYFSAVAPGTRTLAR            GAPCVLEPITIFRLT
Subjt:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT

A0A4P1QPD2 Uncharacterized protein5.8e-8488.7Show/hide
Query:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
        V VVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH       QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
Subjt:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES

Query:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT
        CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR            GAPCVLEPITIFRLT
Subjt:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT

A0A5C7GQ25 Uncharacterized protein7.5e-8488.7Show/hide
Query:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
        VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCH       QSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES
Subjt:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRES

Query:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT
        CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEY MGYFSAVAPGTRTLAR            GAPCVLEPITIFRLT
Subjt:  CLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLAR------------GAPCVLEPITIFRLT

SwissProt top hitse value%identityAlignment
Q3BAI2 Uncharacterized protein ORF917.9e-3092.42Show/hide
Query:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVF
        +QVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTV+VTAAVHRGFGRRLPCHQ   F
Subjt:  VQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQTCVF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACA
TCGAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA
TTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCC
GCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCT
TCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTT
TTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCGTAGCGCCTGGTACTCGAACATTGGCTCGAGGGGCACCTTGCGTCCTTGAACCG
ATAACCATCTTTCGGCTAACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACA
TCGAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA
TTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCC
GCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGTGAGGAGGCACCCCT
TCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTT
TTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGGGTTACTTCAGCGCCGTAGCGCCTGGTACTCGAACATTGGCTCGAGGGGCACCTTGCGTCCTTGAACCG
ATAACCATCTTTCGGCTAACCTAG
Protein sequenceShow/hide protein sequence
MDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRVKLPSAFALEGQSPSGPRKPLHASVQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTA
AVHRGFGRRLPCHQTCVFGKQSPGPGHCDPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMGYFSAVAPGTRTLARGAPCVLEP
ITIFRLT