; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001564 (gene) of Chayote v1 genome

Gene IDSed0001564
OrganismSechium edule (Chayote v1)
Descriptionexosome complex component RRP41 homolog
Genome locationLG07:39728886..39732234
RNA-Seq ExpressionSed0001564
SyntenySed0001564
Gene Ontology termsGO:0016075 - rRNA catabolic process (biological process)
GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process)
GO:0034475 - U4 snRNA 3'-end processing (biological process)
GO:0071028 - nuclear mRNA surveillance (biological process)
GO:0071051 - polyadenylation-dependent snoRNA 3'-end processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0004527 - exonuclease activity (molecular function)
GO:0009022 - tRNA nucleotidyltransferase activity (molecular function)
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3964871.1 hypothetical protein CMV_010887 [Castanea mollissima]5.8e-12191.67Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRA+I AV++ADGSA+FEMGNTKV+A+VYGPREVQN +QQ+++QALVRCEY+MANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTME CILTHLMPRSQIDIFVQVLQADGGTRS CINAATLALADAGIPMRD+VTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRG
        LPIDIFENVMQLAIEGCKA+ANYIRE+MLENTK+LEYRRG
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRG

XP_022157614.1 exosome complex component RRP41 homolog [Momordica charantia]3.1e-12293.36Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLR DGRRPMEMRQIR +I AVS+ADGSA+FEMGNTKV+A+VYGPREVQN SQQ+S+QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIF+QVLQADGGTRS CINAATLALADAGIPMRDIVTSCS+GYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA
        LPIDIFENVMQLAIEGCKAVA+YIREVMLENTKKLEY+RGA
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA

XP_022941604.1 exosome complex component RRP41 homolog [Cucurbita moschata]9.6e-12495.02Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRA+I AVS+ADGSA+FEMGNTKVLA+VYGPREVQN SQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRS CINAATLALADAGIPMRDIVTSCS+GYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA
        LP+DIFENVMQLAIEGCKAVANYIREVMLE+TKKLEY RGA
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA

XP_030944786.1 exosome complex component RRP41 homolog [Quercus lobata]5.8e-12191.67Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRA+I AV++ADGSA+FEMGNTKV+A+VYGPREVQN +QQ+++QALVRCEY+MANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTME CILTHLMPRSQIDIFVQVLQADGGTRS CINAATLALADAGIPMRD+VTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRG
        LPIDIFENVMQLAIEGCKA+ANYIRE+MLENTK+LEYRRG
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRG

XP_038891797.1 exosome complex component RRP41 homolog [Benincasa hispida]9.0e-12293.72Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRA+I AVS+A+GSA+FEMGNTKVLA+VYGPREVQN SQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRS CINAATLALADAGIPMRDIVTSCS+GYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRR
        LPID+FENVMQLAIEGCKA+A+YIREVML+NTK+LEY R
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRR

TrEMBL top hitse value%identityAlignment
A0A6J1DWZ5 exosome complex component RRP41 homolog1.5e-12293.36Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLR DGRRPMEMRQIR +I AVS+ADGSA+FEMGNTKV+A+VYGPREVQN SQQ+S+QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIF+QVLQADGGTRS CINAATLALADAGIPMRDIVTSCS+GYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA
        LPIDIFENVMQLAIEGCKAVA+YIREVMLENTKKLEY+RGA
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA

A0A6J1FNX1 exosome complex component RRP41 homolog4.6e-12495.02Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRA+I AVS+ADGSA+FEMGNTKVLA+VYGPREVQN SQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRS CINAATLALADAGIPMRDIVTSCS+GYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA
        LP+DIFENVMQLAIEGCKAVANYIREVMLE+TKKLEY RGA
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA

A0A6J1JKC7 exosome complex component RRP41 homolog4.6e-12495.02Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRA+I AVS+ADGSA+FEMGNTKVLA+VYGPREVQN SQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDIFVQVLQADGGTRS CINAATLALADAGIPMRDIVTSCS+GYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA
        LP+DIFENVMQLAIEGCKAVANYIREVMLE+TKKLEY RGA
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA

A0A7N2MX64 Uncharacterized protein2.8e-12191.67Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        MEFVSPEGLRLDGRRPMEMRQIRA+I AV++ADGSA+FEMGNTKV+A+VYGPREVQN +QQ+++QALVRCEY+MANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTME CILTHLMPRSQIDIFVQVLQADGGTRS CINAATLALADAGIPMRD+VTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMD+K
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRG
        LPIDIFENVMQLAIEGCKA+ANYIRE+MLENTK+LEYRRG
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRG

B9SWZ0 Exosome complex exonuclease RRP41, putative1.8e-12090.83Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        ME+VSPEGLRLDGRRPMEMRQ+RAQI AVS+ADGSA+FEMGNTKV+A+VYGPREVQN SQQ+ +QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
        QTMEECILTHLMPRSQIDI+VQVLQADGGTRS CINAATLALADAGIPMRD+VTSCS+GYLNSTPLLDLNYVEDSAGGPDVTVG LPKLDKVTLLQMDAK
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRG
        LPID FENVMQLA+EGCKA+ANYIRE++LENTK+LEYRRG
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRG

SwissProt top hitse value%identityAlignment
Q5JIR6 Exosome complex component Rrp411.6e-5246.38Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR
        ++ +   G R+DGR+  E+R I+ ++  +  ADGSA  E G  KVLA+VYGPRE+     Q  ++A++R  Y MA FS  +R +KP  DRRS EIS VIR
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIR

Query:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK
          +E  +L H+ PR+ ID+F+++LQAD GTR   I AA+LALADAGIPM+D+V +C++G ++   +LDLN  ED+ G  DV V  +P  + +TLLQMD  
Subjt:  QTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAK

Query:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKL
        L  D F   ++LAI+G KAV    RE + E   K+
Subjt:  LPIDIFENVMQLAIEGCKAVANYIREVMLENTKKL

Q7YRA3 Exosome complex component RRP412.4e-6149.36Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQ-NNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        +E +S +G R+DGRR  E+R+I+A++   ++ADGSA  E GNTK LA VYGP E++ + ++ + ++ALV C+Y+ A FSTG+R R+P GDR+S E+ L +
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQ-NNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQT E  ILT L PRSQIDI+VQVLQADGGT + C+NAATLA+ DAGIPMRD V +CS+G+++ T L DL++VE++AGGP + +  LP   ++ LL+MDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKK
        +L  D  E V++ A    + V   +  V+ ++ ++
Subjt:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKK

Q921I9 Exosome complex component RRP418.3e-6248.55Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQ-NNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        +E +S +G R+DGRR  E+R+I+A++   ++ADGSA  E GNTK LA VYGP E++ + S+ + ++ALV C+Y+ A FSTG+R R+P GDR+S E+ L +
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQ-NNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQT E  ILT L PRSQIDI+VQVLQADGGT + C+NAATLA+ DAGIPMRD V +CS+G+++ T L DL++VE++AGGP + +  LP   ++ LL+MD+
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRG
        +L  D  E V++ A +  + V   +  V+ ++ ++     G
Subjt:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRG

Q9NPD3 Exosome complex component RRP418.3e-6249.36Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQ-NNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        +E +S +G R+DGRR  E+R+I+A++   ++ADGSA  E GNTK LA VYGP E++ + ++ + ++ALV C+Y+ A FSTG+R R+P GDR+S E+ L +
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQ-NNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQT E  ILT L PRSQIDI+VQVLQADGGT + C+NAATLA+ DAGIPMRD V +CS+G+++ T L DL++VE++AGGP + +  LP   ++ LL+MDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKK
        +L  D  E V++ A +  + V   +  V+ ++ ++
Subjt:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKK

Q9SP08 Exosome complex component RRP41 homolog4.5e-10077.69Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        ME+V+PEGLRLDGRR  EMRQI A++  VS+ADGSA+FEMGNTKV+A+VYGPRE+QN SQQ  N  A+V CEY+MA FSTGDR R+ K DRRSTE+SLVI
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQTME CILT LMP SQIDIF+QVLQADGGTRS CINAATLALADAGIPMRD+  SCS+GYLNSTPLLDLNYVEDSAGG DVTVG LPKLDKV+LLQMDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA
        KLP++ FE V  LA EGCKA+A  IREV+ ENTK+LEYRR A
Subjt:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA

Arabidopsis top hitse value%identityAlignment
AT3G46210.1 Ribosomal protein S5 domain 2-like superfamily protein2.8e-1228.72Show/hide
Query:  RLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL
        R DGR P ++R +      +    GSA +  G+TKVLA+VYGP+     ++              A F    + +  +  +   E  +++++T++  C+L
Subjt:  RLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL

Query:  THLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDI-VTSCSSGYLNSTPLLDLNYVEDSAGG-------PDVTVGFLPK
        T + P +   + +QV+  DG      INAA  AL DAGIPM+ + V  C     N   +LD N +E+           P+ T+  LP+
Subjt:  THLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDI-VTSCSSGYLNSTPLLDLNYVEDSAGG-------PDVTVGFLPK

AT3G46210.2 Ribosomal protein S5 domain 2-like superfamily protein2.8e-1228.72Show/hide
Query:  RLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL
        R DGR P ++R +      +    GSA +  G+TKVLA+VYGP+     ++              A F    + +  +  +   E  +++++T++  C+L
Subjt:  RLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEE-CIL

Query:  THLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDI-VTSCSSGYLNSTPLLDLNYVEDSAGG-------PDVTVGFLPK
        T + P +   + +QV+  DG      INAA  AL DAGIPM+ + V  C     N   +LD N +E+           P+ T+  LP+
Subjt:  THLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDI-VTSCSSGYLNSTPLLDLNYVEDSAGG-------PDVTVGFLPK

AT3G61620.1 3'-5'-exoribonuclease family protein3.2e-10177.69Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        ME+V+PEGLRLDGRR  EMRQI A++  VS+ADGSA+FEMGNTKV+A+VYGPRE+QN SQQ  N  A+V CEY+MA FSTGDR R+ K DRRSTE+SLVI
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQTME CILT LMP SQIDIF+QVLQADGGTRS CINAATLALADAGIPMRD+  SCS+GYLNSTPLLDLNYVEDSAGG DVTVG LPKLDKV+LLQMDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA
        KLP++ FE V  LA EGCKA+A  IREV+ ENTK+LEYRR A
Subjt:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA

AT3G61620.2 3'-5'-exoribonuclease family protein3.2e-10177.69Show/hide
Query:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI
        ME+V+PEGLRLDGRR  EMRQI A++  VS+ADGSA+FEMGNTKV+A+VYGPRE+QN SQQ  N  A+V CEY+MA FSTGDR R+ K DRRSTE+SLVI
Subjt:  MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSN-QALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVI

Query:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA
        RQTME CILT LMP SQIDIF+QVLQADGGTRS CINAATLALADAGIPMRD+  SCS+GYLNSTPLLDLNYVEDSAGG DVTVG LPKLDKV+LLQMDA
Subjt:  RQTMEECILTHLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDA

Query:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA
        KLP++ FE V  LA EGCKA+A  IREV+ ENTK+LEYRR A
Subjt:  KLPIDIFENVMQLAIEGCKAVANYIREVMLENTKKLEYRRGA

AT4G27490.1 3'-5'-exoribonuclease family protein3.6e-2028.38Show/hide
Query:  RLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILT
        R DGR   + R    Q  AVS A GSA  E GNTKV+ SV+GPRE    +   S+   + C  +  NF++    +         E S ++ + +E  I+ 
Subjt:  RLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILT

Query:  HLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAKLPIDIFENV
           P++ +D+F  VL++ G   S  I+ A+LALADAGI M D++T+ S   +  + ++D    E+        +  +P   ++T L +  +         
Subjt:  HLMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAKLPIDIFENV

Query:  MQLAIEGCKAVANYIREVMLEN
        MQL ++    +   +R+ + ++
Subjt:  MQLAIEGCKAVANYIREVMLEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCGTTAGCCCTGAAGGACTTCGCTTAGATGGTCGCCGGCCCATGGAGATGAGGCAAATCCGAGCTCAAATTGCCGCCGTTTCTGAAGCCGATGGTTCTGCTAT
TTTTGAGATGGGTAACACCAAGGTTCTTGCTTCTGTATATGGTCCAAGAGAGGTTCAAAATAATAGTCAACAAATGAGCAACCAAGCACTGGTGCGTTGCGAGTATACCA
TGGCTAATTTCAGCACTGGAGATCGCATGAGAAAGCCGAAGGGTGATAGGCGATCCACAGAGATATCTTTAGTTATTCGACAGACAATGGAGGAATGCATTCTAACACAT
TTAATGCCTCGATCTCAGATAGATATTTTTGTCCAAGTTCTTCAAGCAGATGGAGGTACCAGATCAACATGTATCAACGCCGCAACTTTGGCGCTTGCTGATGCCGGAAT
TCCCATGCGAGATATCGTTACTTCCTGCAGTTCTGGATACCTTAATAGCACTCCTCTGCTTGATTTGAATTATGTAGAGGATAGCGCTGGTGGCCCTGATGTCACTGTAG
GTTTTCTACCTAAGTTGGATAAAGTCACTCTTCTTCAGATGGATGCTAAATTACCTATAGATATATTCGAGAATGTCATGCAACTTGCAATTGAGGGCTGCAAAGCCGTA
GCTAATTACATTCGAGAAGTAATGTTAGAGAATACCAAAAAACTCGAATATCGCCGTGGAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCGTTAGCCCTGAAGGACTTCGCTTAGATGGTCGCCGGCCCATGGAGATGAGGCAAATCCGAGCTCAAATTGCCGCCGTTTCTGAAGCCGATGGTTCTGCTAT
TTTTGAGATGGGTAACACCAAGGTTCTTGCTTCTGTATATGGTCCAAGAGAGGTTCAAAATAATAGTCAACAAATGAGCAACCAAGCACTGGTGCGTTGCGAGTATACCA
TGGCTAATTTCAGCACTGGAGATCGCATGAGAAAGCCGAAGGGTGATAGGCGATCCACAGAGATATCTTTAGTTATTCGACAGACAATGGAGGAATGCATTCTAACACAT
TTAATGCCTCGATCTCAGATAGATATTTTTGTCCAAGTTCTTCAAGCAGATGGAGGTACCAGATCAACATGTATCAACGCCGCAACTTTGGCGCTTGCTGATGCCGGAAT
TCCCATGCGAGATATCGTTACTTCCTGCAGTTCTGGATACCTTAATAGCACTCCTCTGCTTGATTTGAATTATGTAGAGGATAGCGCTGGTGGCCCTGATGTCACTGTAG
GTTTTCTACCTAAGTTGGATAAAGTCACTCTTCTTCAGATGGATGCTAAATTACCTATAGATATATTCGAGAATGTCATGCAACTTGCAATTGAGGGCTGCAAAGCCGTA
GCTAATTACATTCGAGAAGTAATGTTAGAGAATACCAAAAAACTCGAATATCGCCGTGGAGCATAG
Protein sequenceShow/hide protein sequence
MEFVSPEGLRLDGRRPMEMRQIRAQIAAVSEADGSAIFEMGNTKVLASVYGPREVQNNSQQMSNQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTH
LMPRSQIDIFVQVLQADGGTRSTCINAATLALADAGIPMRDIVTSCSSGYLNSTPLLDLNYVEDSAGGPDVTVGFLPKLDKVTLLQMDAKLPIDIFENVMQLAIEGCKAV
ANYIREVMLENTKKLEYRRGA