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Sed0001567 (gene) of Chayote v1 genome

Gene IDSed0001567
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG03:10649219..10649895
RNA-Seq ExpressionSed0001567
SyntenySed0001567
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7817318.1 Transmembrane protein [Senna tora]2.1e-1272.55Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
        MAK+Q  S+ PWIL+A+P ++V+LIAAHV ALVYWIYRLAT+KQP RRKAH
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
KAG7020426.1 hypothetical protein SDJN02_17110 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-1584.31Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
        MA EQR S GPW LEA+PL+IVLLIAAHVFALVYWIYRLATQKQPPR K H
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
KAG7029467.1 hypothetical protein SDJN02_07806 [Cucurbita argyrosperma subsp. argyrosperma]9.1e-1684.31Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
        MA E+R STGPWILEA+P I+VLLIAAHVFALVYWIY+LA QKQPPRRKAH
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
PON94578.1 Transmembrane protein [Trema orientale]2.1e-1274.51Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
        MA EQ     PW+L+A+PL++VLLIAAHVFALVYWIYRLAT+KQP RRKAH
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
XP_030491439.1 uncharacterized protein LOC115707564 [Cannabis sativa]9.4e-1374.51Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
        M K+Q   T PWILEA+PL++V+LIAAHVFALVYWIYRLAT++QP RRKAH
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
TrEMBL top hitse value%identityAlignment
A0A059CW86 Uncharacterized protein (Fragment)6.6e-1274.51Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
        MA +Q PS  PWI++A P ++VLLIAAHVFALVYWIYRLAT+KQP RRKAH
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
A0A067FV99 Uncharacterized protein3.8e-1276.47Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
        MA EQ P+  PW L+ +PLI+VLLIAAHVFALVYWIYRLAT+KQP RRKAH
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
A0A2P5DIT2 Transmembrane protein3.8e-1272.55Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
        MA EQ     PW+L+ +PLI+VLLIA HVFALVYWIYRLAT+KQP RRKAH
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
A0A2P5F9W8 Transmembrane protein1.0e-1274.51Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
        MA EQ     PW+L+A+PL++VLLIAAHVFALVYWIYRLAT+KQP RRKAH
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
V4UGZ6 Uncharacterized protein3.8e-1276.47Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
        MA EQ P+  PW L+ +PLI+VLLIAAHVFALVYWIYRLAT+KQP RRKAH
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10745.1 unknown protein5.7e-0856.6Show/hide
Query:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQK--QPPRRKAH
        MAKEQ     PW L+ +P ++VLL AAHV AL YWIYRLAT +  Q  R K H
Subjt:  MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQK--QPPRRKAH
AT5G24980.1 unknown protein4.5e-0552.78Show/hide
Query:  LEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRK
        ++ +P ++V L A HV ALVYWIYRLA+ + P R+K
Subjt:  LEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGGAGCAACGGCCATCGACAGGGCCCTGGATCCTCGAAGCATTACCCTTAATTATTGTTCTTCTCATAGCAGCTCACGTCTTCGCTCTGGTTTACTGGATTTA
TAGGTTGGCGACCCAAAAACAACCTCCCAGGAGGAAGGCACACTGA
mRNA sequenceShow/hide mRNA sequence
AAATATTCCTCCATCAGTAAATATTGGTTTCTTTCACGCCACGACAGTTCCCAATTTTCCCCTCACCGCTCCGACGCAAGATCGACTGAACTGGCCTCAAATTTGTAAAC
CCTTGATTTAGGGTTTATCTTCTTCATTATTCAATCTCTTCACCGATCTTTCTCCGGCGAATATGGCGAAGGAGCAACGGCCATCGACAGGGCCCTGGATCCTCGAAGCA
TTACCCTTAATTATTGTTCTTCTCATAGCAGCTCACGTCTTCGCTCTGGTTTACTGGATTTATAGGTTGGCGACCCAAAAACAACCTCCCAGGAGGAAGGCACACTGAGT
TACTGTATGATCCGTTCCTTAATCGTTAATCAAACGCTAATTTGTTTATTGTTTTGTCACTGATGTTGTGGATGCGGTCAAAAAGAGCCATATGACAATGTTTCTCTGTA
AGTATCCGTCAGTGTGTACTATCTGAATCTAAGTTTGGTGTTGAATTTTGATTTGTATGTTTTTTCAATTGATTTAAGTTTAGGCGATCCATTCATTTTGTGTCATCTTG
TTTGGTTTGCTTATCTTGGAAATCTGGG
Protein sequenceShow/hide protein sequence
MAKEQRPSTGPWILEALPLIIVLLIAAHVFALVYWIYRLATQKQPPRRKAH