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Sed0001572 (gene) of Chayote v1 genome

Gene IDSed0001572
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:33031136..33031438
RNA-Seq ExpressionSed0001572
SyntenySed0001572
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587814.1 hypothetical protein SDJN03_16379, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1048.6Show/hide
Query:  MAATKRFVSIALIALLLLSESLTICYANDGENSNSFTRILRRSMINRFE-------TDSSFAERISIKRGPRTTVTTGGSNGSSSSRVSPINVWSAICFF
        MA  KR   I LI LLLLSES  +  A+  ++  S T IL R++++  E       T SS AE+ISIKRG R+ V  G S+ SSSSRV P N+ S ICF 
Subjt:  MAATKRFVSIALIALLLLSESLTICYANDGENSNSFTRILRRSMINRFE-------TDSSFAERISIKRGPRTTVTTGGSNGSSSSRVSPINVWSAICFF

Query:  FVFALLL
        F FA  L
Subjt:  FVFALLL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAACTAAACGCTTTGTTTCGATAGCTCTAATTGCTCTTCTCTTGCTTTCTGAATCTCTCACTATTTGTTATGCTAATGATGGCGAGAATTCGAATTCTTTCAC
GAGAATTCTTCGTCGGAGTATGATTAATCGATTTGAGACCGACTCCTCTTTCGCAGAGAGGATTAGTATCAAAAGAGGACCTCGAACCACCGTAACTACAGGTGGTTCCA
ATGGATCGTCGTCGAGCCGAGTGTCGCCCATTAATGTTTGGTCTGCGATTTGTTTCTTCTTCGTGTTTGCTTTGTTGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAACTAAACGCTTTGTTTCGATAGCTCTAATTGCTCTTCTCTTGCTTTCTGAATCTCTCACTATTTGTTATGCTAATGATGGCGAGAATTCGAATTCTTTCAC
GAGAATTCTTCGTCGGAGTATGATTAATCGATTTGAGACCGACTCCTCTTTCGCAGAGAGGATTAGTATCAAAAGAGGACCTCGAACCACCGTAACTACAGGTGGTTCCA
ATGGATCGTCGTCGAGCCGAGTGTCGCCCATTAATGTTTGGTCTGCGATTTGTTTCTTCTTCGTGTTTGCTTTGTTGTTGTGA
Protein sequenceShow/hide protein sequence
MAATKRFVSIALIALLLLSESLTICYANDGENSNSFTRILRRSMINRFETDSSFAERISIKRGPRTTVTTGGSNGSSSSRVSPINVWSAICFFFVFALLL