; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001584 (gene) of Chayote v1 genome

Gene IDSed0001584
OrganismSechium edule (Chayote v1)
DescriptionNuclear transcription factor Y subunit
Genome locationLG09:37703014..37707530
RNA-Seq ExpressionSed0001584
SyntenySed0001584
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135933.1 nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus]5.4e-14383.07Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL
        MPSEPEN DQQV DGAKYLLQSTK+SEPWWHG G+NTIAGEDA KTSSAEYLNV V S A QPQANDEN GK  QHLKYIPFSTSPP GEHLDLNSQMEL
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQML SYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD
        SGGRFLNTKKPNN +SN+  EEDI+   NHS K +S+A S Y +T+  GI++ L++Q   RE M +NMQITHAFFNGKSN HGLSTY+SQL DVE GHLD
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD

Query:  QPHESMQVNGAPQRAISIK
        QPHESMQVNGAPQRAI IK
Subjt:  QPHESMQVNGAPQRAISIK

XP_008461297.1 PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo]1.7e-14483.7Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL
        MPSEPEN DQQV D AKYLLQS+KYSEPWWHG G+NTIAGEDA KTSSAEYLNV V S A QPQANDEN GK  QHLKYIPFSTSPP GEHLDLNSQMEL
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQML SYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD
        SGGRFLNTKKPNN +SN+  EEDIN G NHS K +S+ GS Y +T   GI++ L++Q   RELM +NMQITHAFFNGKSN HGLSTYNSQL DVE GHLD
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD

Query:  QPHESMQVNGAPQRAISIK
         PHESMQVNGAPQRAI IK
Subjt:  QPHESMQVNGAPQRAISIK

XP_022150009.1 nuclear transcription factor Y subunit A-4-like [Momordica charantia]9.6e-14080.94Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL
        MPS+PEN DQQV DG KY+LQSTKYSEPWWHG G+NT  GED  +TSSA+YLNV V+S A Q QANDEN  K  QHLKYIPFSTSPP GEHLDLNS MEL
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QML SYGPQS LPHFYGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQE-DRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHL
        SGGRFLNTKK NN ISN++TEED N G NH  K +S+AGSNY  TD NG++D  +DQQE  R  M +NM ITHAFF+GKSNGHGLSTYNSQL+DVE GHL
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQE-DRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHL

Query:  DQPHESMQVNGAPQRAISIK
         QPHESMQVNGAPQRAI IK
Subjt:  DQPHESMQVNGAPQRAISIK

XP_023547827.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo]7.3e-14081.13Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL
        MPS+PEN DQQ+ DG+KYL+QSTKYSE WWHG G+NTIAGEDATKT+SA+YLN  V+S   Q QANDEN GK  QHLKYIPFSTSPP GE LDLNSQMEL
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQML S GPQST PH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD
        SGGRFLNTKKPNN ISN+  EE IN G NHS K +++AGS Y   D NGI+D LN  +ED+E M +N+QIT AFFNGK NGHG+STY SQLADVE GHLD
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD

Query:  QPHESMQVNGAPQRAISI
        QPHESMQVNGAPQRAI I
Subjt:  QPHESMQVNGAPQRAISI

XP_038899773.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]9.3e-14384.28Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL
        MPS+PEN DQQV DGAKYLLQSTKYSEPWWHG G+NTI GEDA KTSSAEYLNV VTS A Q QANDEN GK  QHLKYIPFSTSPP GEHLD NSQMEL
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QML SYGPQSTLPH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD
        SGGRFLNTKKPNN ISN+  EEDIN   NH  K +S A   YT+ D N I+D LN   E RELM  NMQITHAFFNGKSN HGLSTYNSQLADVE GHLD
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD

Query:  QPHESMQVNGAPQRAISI
        QPHESMQVNGAPQRAI I
Subjt:  QPHESMQVNGAPQRAISI

TrEMBL top hitse value%identityAlignment
A0A0A0K612 Nuclear transcription factor Y subunit2.6e-14383.07Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL
        MPSEPEN DQQV DGAKYLLQSTK+SEPWWHG G+NTIAGEDA KTSSAEYLNV V S A QPQANDEN GK  QHLKYIPFSTSPP GEHLDLNSQMEL
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQML SYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD
        SGGRFLNTKKPNN +SN+  EEDI+   NHS K +S+A S Y +T+  GI++ L++Q   RE M +NMQITHAFFNGKSN HGLSTY+SQL DVE GHLD
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD

Query:  QPHESMQVNGAPQRAISIK
        QPHESMQVNGAPQRAI IK
Subjt:  QPHESMQVNGAPQRAISIK

A0A1S3CED9 Nuclear transcription factor Y subunit8.2e-14583.7Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL
        MPSEPEN DQQV D AKYLLQS+KYSEPWWHG G+NTIAGEDA KTSSAEYLNV V S A QPQANDEN GK  QHLKYIPFSTSPP GEHLDLNSQMEL
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQML SYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD
        SGGRFLNTKKPNN +SN+  EEDIN G NHS K +S+ GS Y +T   GI++ L++Q   RELM +NMQITHAFFNGKSN HGLSTYNSQL DVE GHLD
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD

Query:  QPHESMQVNGAPQRAISIK
         PHESMQVNGAPQRAI IK
Subjt:  QPHESMQVNGAPQRAISIK

A0A5D3CGW1 Nuclear transcription factor Y subunit8.2e-14583.7Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL
        MPSEPEN DQQV D AKYLLQS+KYSEPWWHG G+NTIAGEDA KTSSAEYLNV V S A QPQANDEN GK  QHLKYIPFSTSPP GEHLDLNSQMEL
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQML SYGPQ+TLP  YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD
        SGGRFLNTKKPNN +SN+  EEDIN G NHS K +S+ GS Y +T   GI++ L++Q   RELM +NMQITHAFFNGKSN HGLSTYNSQL DVE GHLD
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD

Query:  QPHESMQVNGAPQRAISIK
         PHESMQVNGAPQRAI IK
Subjt:  QPHESMQVNGAPQRAISIK

A0A6J1D8S0 Nuclear transcription factor Y subunit4.6e-14080.94Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL
        MPS+PEN DQQV DG KY+LQSTKYSEPWWHG G+NT  GED  +TSSA+YLNV V+S A Q QANDEN  K  QHLKYIPFSTSPP GEHLDLNS MEL
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQY QML SYGPQS LPHFYGLHH RMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQE-DRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHL
        SGGRFLNTKK NN ISN++TEED N G NH  K +S+AGSNY  TD NG++D  +DQQE  R  M +NM ITHAFF+GKSNGHGLSTYNSQL+DVE GHL
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQE-DRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHL

Query:  DQPHESMQVNGAPQRAISIK
         QPHESMQVNGAPQRAI IK
Subjt:  DQPHESMQVNGAPQRAISIK

A0A6J1GNB7 Nuclear transcription factor Y subunit4.3e-13880.19Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL
        MPS+PEN DQQ+ DG+KYL+QSTKYS  WW+G G+NTIAGEDATKT+SA+YLN  V+S   Q Q NDEN GK  QHLKYIPFS SPP GE LDLNSQMEL
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKG-QHLKYIPFSTSPPGGEHLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQML S GPQST PH YGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD
        SGGRFLNTKKPNN ISN+  EE IN G NHS K +S+AGS Y   D NGI+D LN  +ED+E M +N+QIT AFFNGK NGHG+STY SQLADVE GHLD
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAK-LSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLD

Query:  QPHESMQVNGAPQRAISI
        QPHESMQVNGAPQRAI I
Subjt:  QPHESMQVNGAPQRAISI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-72.3e-2750.71Show/hide
Query:  HSIVLTSYPFSDAQYCQMLNSYGPQSTLPH--FYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +S+    YP+ D  Y  +        T  H    G+    +PLP +  EEPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG
Subjt:  HSIVLTSYPFSDAQYCQMLNSYGPQSTLPH--FYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSN
         GGRFLN KK +    +S+ EE  NL    SA  + +G++
Subjt:  SGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSN

Q8VY64 Nuclear transcription factor Y subunit A-46.2e-2540.59Show/hide
Query:  TSSAEYLNVNVTSDAMQPQANDENTGKGQHLKYIPFSTSPPGGEHLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFY--------GLH
        TSS   L+ N  S A + + + +           P   S    E +D NS   E + H +    YP+ D  Y  +   +  Q+ LPH Y        G+ 
Subjt:  TSSAEYLNVNVTSDAMQPQANDENTGKGQHLKYIPFSTSPPGGEHLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLNSYGPQSTLPHFY--------GLH

Query:  HARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKA
           +PL  +  EEPV+VNAKQYHGILRRRQSRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N    +   EE+    +N S   S  
Subjt:  HARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKA

Query:  GS
         S
Subjt:  GS

Q945M9 Nuclear transcription factor Y subunit A-91.2e-3140.24Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWH------GAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKGQHLKYIPFSTSP-PGGEHLDL
        M S+ ++   +V       + S+  S   WH       A S+  AG+ ++K+     + + + S+  +  +N +NT      K    +TSP   G++ D 
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWH------GAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKGQHLKYIPFSTSP-PGGEHLDL

Query:  NSQM------------ELVGHSI-VLTSYPFSDAQYCQMLNSYG--PQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI
        N +             +LVGH++   +S P+ D  Y  ++ +YG  P   +P + G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+I
Subjt:  NSQM------------ELVGHSI-VLTSYPFSDAQYCQMLNSYG--PQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI

Query:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTEEDIN
        KSRKPYLHESRH HAMRR RG+GGRF   KK N   S    EE  N
Subjt:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTEEDIN

Q9LXV5 Nuclear transcription factor Y subunit A-12.1e-2848.67Show/hide
Query:  ELVGHSIVLTSYPFSDAQYCQMLNSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRR
        ELVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRR
Subjt:  ELVGHSIVLTSYPFSDAQYCQMLNSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRR

Query:  ARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSNYTMTDVN
        AR SGGRF    +   G      E+     +   +  + +GS    TD N
Subjt:  ARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSNYTMTDVN

Q9M9X4 Nuclear transcription factor Y subunit A-25.1e-2740.39Show/hide
Query:  WWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKGQHLKY------IPFSTSPPGGEHLDLNSQMELVGHS--IVLTSYPFSDAQYCQML
        WW   GS  +A E     S + +  V V S     Q  D+ +    HL +       P     P G    + S    +G S   + T YP+ + QY  ++
Subjt:  WWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKGQHLKY------IPFSTSPPGGEHLDLNSQMELVGHS--IVLTSYPFSDAQYCQML

Query:  NSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISN
        ++YG QS            +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLHA+RR RGSGGRFLNTK  N  + N
Subjt:  NSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISN

Query:  STT
        S T
Subjt:  STT

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A98.4e-3340.24Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWH------GAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKGQHLKYIPFSTSP-PGGEHLDL
        M S+ ++   +V       + S+  S   WH       A S+  AG+ ++K+     + + + S+  +  +N +NT      K    +TSP   G++ D 
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWWH------GAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKGQHLKYIPFSTSP-PGGEHLDL

Query:  NSQM------------ELVGHSI-VLTSYPFSDAQYCQMLNSYG--PQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI
        N +             +LVGH++   +S P+ D  Y  ++ +YG  P   +P + G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+I
Subjt:  NSQM------------ELVGHSI-VLTSYPFSDAQYCQMLNSYG--PQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI

Query:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTEEDIN
        KSRKPYLHESRH HAMRR RG+GGRF   KK N   S    EE  N
Subjt:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTEEDIN

AT5G12840.1 nuclear factor Y, subunit A11.5e-2948.67Show/hide
Query:  ELVGHSIVLTSYPFSDAQYCQMLNSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRR
        ELVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRR
Subjt:  ELVGHSIVLTSYPFSDAQYCQMLNSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRR

Query:  ARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSNYTMTDVN
        AR SGGRF    +   G      E+     +   +  + +GS    TD N
Subjt:  ARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSNYTMTDVN

AT5G12840.2 nuclear factor Y, subunit A11.3e-3035.45Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWW----HGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQ----ANDENTGKGQHLKYIPFSTSPPGG----
        M S+P   +++  +    + Q   Y+EPWW     G           + +SS +  N + ++D          N EN G  +  +    S S   G    
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWW----HGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQ----ANDENTGKGQHLKYIPFSTSPPGG----

Query:  ---------EHLDLNSQMELVGHSIVLTSYPFSDAQYCQMLNSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI
                     L    ELVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KVI
Subjt:  ---------EHLDLNSQMELVGHSIVLTSYPFSDAQYCQMLNSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI

Query:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSNYTMTDVN
        + RKPYLHESRH HAMRRAR SGGRF    +   G      E+     +   +  + +GS    TD N
Subjt:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSNYTMTDVN

AT5G12840.3 nuclear factor Y, subunit A11.5e-2948.67Show/hide
Query:  ELVGHSIVLTSYPFSDAQYCQMLNSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRR
        ELVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KVI+ RKPYLHESRH HAMRR
Subjt:  ELVGHSIVLTSYPFSDAQYCQMLNSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRR

Query:  ARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSNYTMTDVN
        AR SGGRF    +   G      E+     +   +  + +GS    TD N
Subjt:  ARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSNYTMTDVN

AT5G12840.4 nuclear factor Y, subunit A11.3e-3035.45Show/hide
Query:  MPSEPENADQQVPDGAKYLLQSTKYSEPWW----HGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQ----ANDENTGKGQHLKYIPFSTSPPGG----
        M S+P   +++  +    + Q   Y+EPWW     G           + +SS +  N + ++D          N EN G  +  +    S S   G    
Subjt:  MPSEPENADQQVPDGAKYLLQSTKYSEPWW----HGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQ----ANDENTGKGQHLKYIPFSTSPPGG----

Query:  ---------EHLDLNSQMELVGHSIVLTSYPFSDAQYCQMLNSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI
                     L    ELVGH I     P+ D  Y  ++ +YG Q      + G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KVI
Subjt:  ---------EHLDLNSQMELVGHSIVLTSYPFSDAQYCQMLNSYGPQST-LPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVI

Query:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSNYTMTDVN
        + RKPYLHESRH HAMRRAR SGGRF    +   G      E+     +   +  + +GS    TD N
Subjt:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTEEDINLGKNHSAKLSKAGSNYTMTDVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTCAGAACCAGAAAACGCAGACCAACAAGTACCCGATGGGGCGAAGTATTTGCTTCAATCGACCAAATACTCTGAACCTTGGTGGCATGGAGCTGGAAGCAATAC
CATCGCAGGTGAAGATGCTACCAAAACATCTTCTGCAGAATACCTGAACGTCAATGTTACCAGTGATGCAATGCAGCCACAAGCAAATGATGAAAATACTGGGAAAGGAC
AGCATCTCAAGTACATTCCATTTTCGACATCTCCACCCGGGGGTGAACACCTTGATCTAAATTCCCAGATGGAACTTGTGGGCCACTCGATTGTTTTGACATCATATCCT
TTTTCAGATGCACAATATTGTCAAATGCTGAATTCTTATGGACCACAATCTACGTTACCTCATTTTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAATGGA
AGAAGAGCCTGTTTACGTAAACGCAAAGCAGTATCACGGTATTCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAACTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCAT
ATCTTCACGAGTCCAGACACCTCCATGCGATGAGACGAGCAAGAGGAAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGGTATTTCCAATTCAACTACGGAG
GAAGACATCAATCTTGGTAAAAACCATTCAGCAAAACTGAGCAAGGCCGGGTCCAACTATACGATGACTGATGTAAACGGAATCCAGGATGCACTTAACGATCAACAGGA
AGACAGAGAGCTCATGGCTAGAAACATGCAGATAACACACGCTTTCTTCAACGGAAAATCGAATGGCCATGGTTTATCCACGTACAATTCACAACTCGCCGATGTCGAGG
CAGGGCATCTCGATCAGCCGCATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCTCCATCAAGTGA
mRNA sequenceShow/hide mRNA sequence
TCATCTTCCACTGCTACTGCACACAGAGGAGAGAGAGAGAGTAATGGAACTGAGCTAGAAAACCAGAGCGACCTGTGAAAGCTACAGATTTCTAGGGTTTCGTCCTTTGA
TTCATTATCAAATTTGACGAGGTTTGAAGGATGCCCTCAGAACCAGAAAACGCAGACCAACAAGTACCCGATGGGGCGAAGTATTTGCTTCAATCGACCAAATACTCTGA
ACCTTGGTGGCATGGAGCTGGAAGCAATACCATCGCAGGTGAAGATGCTACCAAAACATCTTCTGCAGAATACCTGAACGTCAATGTTACCAGTGATGCAATGCAGCCAC
AAGCAAATGATGAAAATACTGGGAAAGGACAGCATCTCAAGTACATTCCATTTTCGACATCTCCACCCGGGGGTGAACACCTTGATCTAAATTCCCAGATGGAACTTGTG
GGCCACTCGATTGTTTTGACATCATATCCTTTTTCAGATGCACAATATTGTCAAATGCTGAATTCTTATGGACCACAATCTACGTTACCTCATTTTTATGGACTTCACCA
TGCTAGGATGCCTTTACCCCTTGAAATGGAAGAAGAGCCTGTTTACGTAAACGCAAAGCAGTATCACGGTATTCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAACTTG
AGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCACGAGTCCAGACACCTCCATGCGATGAGACGAGCAAGAGGAAGTGGAGGACGTTTCCTCAATACCAAAAAGCCC
AACAATGGTATTTCCAATTCAACTACGGAGGAAGACATCAATCTTGGTAAAAACCATTCAGCAAAACTGAGCAAGGCCGGGTCCAACTATACGATGACTGATGTAAACGG
AATCCAGGATGCACTTAACGATCAACAGGAAGACAGAGAGCTCATGGCTAGAAACATGCAGATAACACACGCTTTCTTCAACGGAAAATCGAATGGCCATGGTTTATCCA
CGTACAATTCACAACTCGCCGATGTCGAGGCAGGGCATCTCGATCAGCCGCATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCTCCATCAAGTGAAAGTTT
CTTGATGGGGAACGGGGCGTCGCCAACACTGTTTAACCCGTTTCACTACCGAATAAAAAGAACTTAGAAGAAGATTCAGTATAACTGTTGATTCTTGTGATAATTTAGTA
CTGGTTTGCAAGTTGGTGGATTTTGACCCTTTCTGCTGGGAAGAAAACTGCTTTTTGTGGTGTTTCTCAGGCAATTCATTCTTGGCTTAAGTAAGTTGGTTCTCTAAGGT
GACATGAAGGAAGATGAAGAAATGGAGTACACAAAAATGTGGTACTTTTGTCTCTTCAATTTACCTCTTATATGACTTATGTTATCTAATCTTGAATGTGTGTTTAAAAC
TATAATTTAAGTGTGCAGACTTGTAACTTAATTTAAGGACAATTGTGTGTTGTATCTATTGAACTTTGTGTGCATGTTTGAGATGATATATATTTTCATGTTTGTGGA
Protein sequenceShow/hide protein sequence
MPSEPENADQQVPDGAKYLLQSTKYSEPWWHGAGSNTIAGEDATKTSSAEYLNVNVTSDAMQPQANDENTGKGQHLKYIPFSTSPPGGEHLDLNSQMELVGHSIVLTSYP
FSDAQYCQMLNSYGPQSTLPHFYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNGISNSTTE
EDINLGKNHSAKLSKAGSNYTMTDVNGIQDALNDQQEDRELMARNMQITHAFFNGKSNGHGLSTYNSQLADVEAGHLDQPHESMQVNGAPQRAISIK