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Sed0001601 (gene) of Chayote v1 genome

Gene IDSed0001601
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:3875606..3886479
RNA-Seq ExpressionSed0001601
SyntenySed0001601
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035100.1 hypothetical protein E6C27_scaffold57G001750 [Cucumis melo var. makuwa]1.1e-0440Show/hide
Query:  MATIQR-LVPISLIALVLLSESLAVL-SFEHGQELKPLAGILRPNNDDTVVSSLAEKIGIKRGSRGGHSSRSSSSRVPP--FNLGSVICFFTAFGFAQLL
        MA I R L+P++LI+L+L SESLA + S +HGQ            +D ++   +  K G++ G   G S+ SSS+++    FN+GS+ICF  AF FA  L
Subjt:  MATIQR-LVPISLIALVLLSESLAVL-SFEHGQELKPLAGILRPNNDDTVVSSLAEKIGIKRGSRGGHSSRSSSSRVPP--FNLGSVICFFTAFGFAQLL

KAG6587814.1 hypothetical protein SDJN03_16379, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1657.41Show/hide
Query:  MATIQRLVPISLIALVLLSESLAVLSFEHGQELKPLAGILRPN---------NDDTVVSSLAEKIGIKRGSR----GGHSSRSSSSRVPPFNLGSVICFF
        MA I+RL PI+LI L+LLSES  V S ++ Q+ K L GIL  N          D    SSLAEKI IKRG+R    GGHSS SSSSRVPPFN+ SVICF 
Subjt:  MATIQRLVPISLIALVLLSESLAVLSFEHGQELKPLAGILRPN---------NDDTVVSSLAEKIGIKRGSR----GGHSSRSSSSRVPPFNLGSVICFF

Query:  TAFGFAQL
         AF FA L
Subjt:  TAFGFAQL

KGN65176.1 hypothetical protein Csa_019975 [Cucumis sativus]2.9e-0548.08Show/hide
Query:  ATIQR-LVPISLIALVLLSESL-AVLSFEHGQELKPLAGILRPNNDDTVVSSLAEKIGIKRGSR----GGHSSRSSSSRVPP---FNLGSVICFFTAFGF
        A I R L+PI+LI+L+L SESL A+ S +H Q+        RP + D+  +SL EKI IKRG R     G S+ SSS+RV     FN+GSVICF  AF  
Subjt:  ATIQR-LVPISLIALVLLSESL-AVLSFEHGQELKPLAGILRPNNDDTVVSSLAEKIGIKRGSR----GGHSSRSSSSRVPP---FNLGSVICFFTAFGF

Query:  AQLL
        A  L
Subjt:  AQLL

TrEMBL top hitse value%identityAlignment
A0A0A0LYV9 Uncharacterized protein1.4e-0548.08Show/hide
Query:  ATIQR-LVPISLIALVLLSESL-AVLSFEHGQELKPLAGILRPNNDDTVVSSLAEKIGIKRGSR----GGHSSRSSSSRVPP---FNLGSVICFFTAFGF
        A I R L+PI+LI+L+L SESL A+ S +H Q+        RP + D+  +SL EKI IKRG R     G S+ SSS+RV     FN+GSVICF  AF  
Subjt:  ATIQR-LVPISLIALVLLSESL-AVLSFEHGQELKPLAGILRPNNDDTVVSSLAEKIGIKRGSR----GGHSSRSSSSRVPP---FNLGSVICFFTAFGF

Query:  AQLL
        A  L
Subjt:  AQLL

A0A5D3BCG4 Uncharacterized protein5.4e-0540Show/hide
Query:  MATIQR-LVPISLIALVLLSESLAVL-SFEHGQELKPLAGILRPNNDDTVVSSLAEKIGIKRGSRGGHSSRSSSSRVPP--FNLGSVICFFTAFGFAQLL
        MA I R L+P++LI+L+L SESLA + S +HGQ            +D ++   +  K G++ G   G S+ SSS+++    FN+GS+ICF  AF FA  L
Subjt:  MATIQR-LVPISLIALVLLSESLAVL-SFEHGQELKPLAGILRPNNDDTVVSSLAEKIGIKRGSRGGHSSRSSSSRVPP--FNLGSVICFFTAFGFAQLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGTTCTAACAATAATCGCCCTAACTCAAATTCCTCTAGCAATGACAATGGAGGAAGAGGACAGAATCATGGAGGATGAGGACGAGGCAGAGATTTGGCGTAA
CACACAAATGGCCACAATTCAACGCTTAGTTCCAATATCCCTAATTGCTCTTGTGTTGCTTTCTGAATCTCTGGCTGTTTTGTCTTTTGAACATGGCCAGGAATTGAAAC
CTTTGGCTGGAATTCTTCGCCCGAATAACGACGATACCGTGGTCTCCTCTTTGGCCGAGAAGATCGGTATAAAAAGAGGATCTCGAGGAGGCCATTCCAGTCGATCGTCG
TCGAGCCGGGTGCCACCCTTCAATCTTGGCTCTGTGATCTGTTTCTTCACGGCGTTTGGATTTGCTCAGTTGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGGTTCTAACAATAATCGCCCTAACTCAAATTCCTCTAGCAATGACAATGGAGGAAGAGGACAGAATCATGGAGGATGAGGACGAGGCAGAGATTTGGCGTAA
CACACAAATGGCCACAATTCAACGCTTAGTTCCAATATCCCTAATTGCTCTTGTGTTGCTTTCTGAATCTCTGGCTGTTTTGTCTTTTGAACATGGCCAGGAATTGAAAC
CTTTGGCTGGAATTCTTCGCCCGAATAACGACGATACCGTGGTCTCCTCTTTGGCCGAGAAGATCGGTATAAAAAGAGGATCTCGAGGAGGCCATTCCAGTCGATCGTCG
TCGAGCCGGGTGCCACCCTTCAATCTTGGCTCTGTGATCTGTTTCTTCACGGCGTTTGGATTTGCTCAGTTGTTGTGAAAATTTTAACTCAACCAAGATATATTGTTAAC
CTTGGTTATTTATGTGTGTGTGTGAGTTTTTGGACTTGTTTATATTGGTTTCAATTATTTTCTTGTGATAATT
Protein sequenceShow/hide protein sequence
MEMVLTIIALTQIPLAMTMEEEDRIMEDEDEAEIWRNTQMATIQRLVPISLIALVLLSESLAVLSFEHGQELKPLAGILRPNNDDTVVSSLAEKIGIKRGSRGGHSSRSS
SSRVPPFNLGSVICFFTAFGFAQLL