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Sed0001625 (gene) of Chayote v1 genome

Gene IDSed0001625
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:30867389..30867652
RNA-Seq ExpressionSed0001625
SyntenySed0001625
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586336.1 hypothetical protein SDJN03_19069, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1078.43Show/hide
Query:  VADKEDMDPRGITRSVGTTGKRTCQALTAPAVDRRLRDLCTALFIFPCVSP
        VADKE MDPRGITRSVGTT KRTCQ  T+  VDRRLRDLCTA FIF  V P
Subjt:  VADKEDMDPRGITRSVGTTGKRTCQALTAPAVDRRLRDLCTALFIFPCVSP
KGN60767.1 hypothetical protein Csa_019309 [Cucumis sativus]1.1e-0865.08Show/hide
Query:  MNPNRRLKAVLRGRAGPSRGEGSWVADKEDMDPRGITRSVGTTGKRTCQALTAPAVDRRLRDL
        M  N  L+ VLRGR G S      VADKE MDPRGITR+VGTT KRTCQ  T+  VDRRLRDL
Subjt:  MNPNRRLKAVLRGRAGPSRGEGSWVADKEDMDPRGITRSVGTTGKRTCQALTAPAVDRRLRDL
TrEMBL top hitse value%identityAlignment
A0A0A0LJ66 Uncharacterized protein5.2e-0965.08Show/hide
Query:  MNPNRRLKAVLRGRAGPSRGEGSWVADKEDMDPRGITRSVGTTGKRTCQALTAPAVDRRLRDL
        M  N  L+ VLRGR G S      VADKE MDPRGITR+VGTT KRTCQ  T+  VDRRLRDL
Subjt:  MNPNRRLKAVLRGRAGPSRGEGSWVADKEDMDPRGITRSVGTTGKRTCQALTAPAVDRRLRDL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGATGAACCCAAATCGACGGCTCAAAGCGGTTCTACGTGGCCGGGCCGGGCCGAGCCGAGGCGAGGGGTCCTGGGTTGCCGACAAGGAGGACATGGATCCACG
TGGGATCACGAGGAGCGTGGGGACCACAGGGAAGCGCACGTGTCAAGCACTGACGGCCCCAGCAGTTGACCGTAGATTGCGGGATCTTTGTACGGCCCTTTTTATTTTCC
CCTGTGTGTCCCCAGGTCGGTGTGCGTGTCTGCTTCGCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGATGAACCCAAATCGACGGCTCAAAGCGGTTCTACGTGGCCGGGCCGGGCCGAGCCGAGGCGAGGGGTCCTGGGTTGCCGACAAGGAGGACATGGATCCACG
TGGGATCACGAGGAGCGTGGGGACCACAGGGAAGCGCACGTGTCAAGCACTGACGGCCCCAGCAGTTGACCGTAGATTGCGGGATCTTTGTACGGCCCTTTTTATTTTCC
CCTGTGTGTCCCCAGGTCGGTGTGCGTGTCTGCTTCGCATTTGA
Protein sequenceShow/hide protein sequence
MEKMNPNRRLKAVLRGRAGPSRGEGSWVADKEDMDPRGITRSVGTTGKRTCQALTAPAVDRRLRDLCTALFIFPCVSPGRCACLLRI