; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001641 (gene) of Chayote v1 genome

Gene IDSed0001641
OrganismSechium edule (Chayote v1)
DescriptionSWIB domain-containing protein
Genome locationLG05:37774337..37776587
RNA-Seq ExpressionSed0001641
SyntenySed0001641
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571933.1 hypothetical protein SDJN03_28661, partial [Cucurbita argyrosperma subsp. sororia]3.5e-5479.71Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ
        MAFVSTF+SGE SLL+AR +A  SSVKHP Q   PNLRF+R++TFAS+SNQTTA  RQPRGIMKPR++SPEMQALVGAPEISRT+ALK+IW HIK+HNLQ
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ

Query:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        KPSDKK+I+CDEKL+KIF GKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

XP_022952608.1 uncharacterized protein LOC111455244 [Cucurbita moschata]2.1e-5479.71Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ
        MAFVSTF+SGE SLL+AR +A  SSVKHP Q   PNLRF+R++TFAS+SNQTTA  RQPRGIMKPR++SPEMQALVGAPEISRT+ALK+IW HIK+HNLQ
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ

Query:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        KPSDKK+I+CDEKL+KIF GKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

XP_022972543.1 uncharacterized protein LOC111471082 [Cucurbita maxima]1.0e-5379.71Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ
        MAFVSTF+SGE SLL+AR +A  SSVKHP Q   PNLRF+R++TFAS+SNQ TA  RQPRGIMKPR++SPEMQALVGAPEISRTQALK+IW HIK+HNLQ
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ

Query:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        KPSDKK+I+CDEKL+KIF GKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

XP_023553864.1 uncharacterized protein LOC111811315 [Cucurbita pepo subsp. pepo]2.1e-5479.71Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ
        MAFVSTF+SGE SLL+AR +A  SSVKHP Q   PNLRF+R++TFAS+SNQTTA  RQPRGIMKPR++SPEMQALVGAPEISRTQALK+IW HIK+HNLQ
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ

Query:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        KP+DKK+I+CDEKL+KIF GKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

XP_038888173.1 uncharacterized protein LOC120078055 isoform X1 [Benincasa hispida]3.9e-5379.71Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ
        MAF+STFISGE SLL+ + +A A+SVK P Q   PNLRFAR+VTFAS+SNQ TA  RQPRGIMKPR++SPEMQALVGAPEISRTQALK+IW HIK+HNLQ
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ

Query:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        KPSDKKVI+CDEKL+ IF GKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

TrEMBL top hitse value%identityAlignment
A0A6J1D4Q4 uncharacterized protein LOC1110172919.0e-4873.91Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ
        MAFVSTF SGE +LL+AR  A+ASS+KH  Q    NLRF R VTFA++S+Q TA  R+PRGIMKPR +SPEMQALVG PEISRTQALK+IW HIK+HNLQ
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ

Query:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        +P +KK+IVCDEKL+KIF GKDEVGFL+IAGLISPHFL
Subjt:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

A0A6J1EIX1 uncharacterized protein LOC1114346994.6e-5278.99Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ
        MAFVSTFISGE SLL  R +A  SSVKHP Q    NL FAR+VTFAS+SNQ TA  RQPRGIMKP+++SPEMQALVG PEISRTQALK+IW HIK+HNLQ
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ

Query:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        KPSDKKVI+CDEKL+ IF GKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

A0A6J1GL33 uncharacterized protein LOC1114552441.0e-5479.71Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ
        MAFVSTF+SGE SLL+AR +A  SSVKHP Q   PNLRF+R++TFAS+SNQTTA  RQPRGIMKPR++SPEMQALVGAPEISRT+ALK+IW HIK+HNLQ
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ

Query:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        KPSDKK+I+CDEKL+KIF GKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

A0A6J1IAA1 uncharacterized protein LOC1114710824.9e-5479.71Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ
        MAFVSTF+SGE SLL+AR +A  SSVKHP Q   PNLRF+R++TFAS+SNQ TA  RQPRGIMKPR++SPEMQALVGAPEISRTQALK+IW HIK+HNLQ
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ

Query:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        KPSDKK+I+CDEKL+KIF GKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

A0A6J1JNZ3 uncharacterized protein LOC1114861972.7e-5278.99Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ
        MAFVSTFISGE SLL  R +A +SSVKHP Q    NL FAR+VTFAS+SNQ TA  RQPRGIMKP+++SPEMQALVG PEISRTQALK+IW HIK+HNLQ
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQ

Query:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        KPSDKKVI+CDEKL+ IF GKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp272.1e-0945.45Show/hide
Query:  KPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIF
        KP K+SP++   +G  ++SR Q +K +W +IK H+LQ P+DK+ I+CD+KL+ +F
Subjt:  KPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIF

Q05024 Protein TRI11.0e-0846.3Show/hide
Query:  VSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIFAGK
        +S  +Q  +G+ E+ RTQ +K+IW +IK+H+LQ P D++ I+CDEK+  IF  K
Subjt:  VSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIFAGK

Q08747 Upstream activation factor subunit UAF302.0e-0734.02Show/hide
Query:  SSSNQTTAHVRQPRGI-----MKPRKV--SPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPH
        + S     HV + +G      +  RKV  S  + +L+G  E++RT+ ++ +W +IK HNLQ P++KK I+CDEKL ++  GK      E+  +++ H
Subjt:  SSSNQTTAHVRQPRGI-----MKPRKV--SPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPH

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein9.6e-1851.28Show/hide
Query:  RGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHF
        +GI K R VS ++ +  G  E++R  ALK +W ++K HNLQ P++KK I CD+KL+ IF GKD+VG  EI  L+SPHF
Subjt:  RGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHF

AT2G14880.1 SWIB/MDM2 domain superfamily protein9.0e-3261.21Show/hide
Query:  SSVKHPSQPRSPNLRFARSVTFASSSNQTTA-HVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIFAGKD
        SS++  S P +  LR  R+VT A+ S++ TA + R PRGIMKPR VSPEMQ +V  PEI+RTQALK IW +IK+H+LQ P +K+ I+CDEKL+KIF G+D
Subjt:  SSVKHPSQPRSPNLRFARSVTFASSSNQTTA-HVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIFAGKD

Query:  EVGFLEIAGLISPHFL
         VGFLEIA LI PHFL
Subjt:  EVGFLEIAGLISPHFL

AT2G35605.1 SWIB/MDM2 domain superfamily protein4.3e-1848.96Show/hide
Query:  VTFASSSNQTTAHV-RQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHF
        V  A +++ T A   RQ  GI+K   VS  +   +G  E+SRT A+K IW +IK +NLQ P +K+ I+CDE+L+ IF+GKD VGFLEI+ L+S HF
Subjt:  VTFASSSNQTTAHV-RQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHF

AT3G03590.1 SWIB/MDM2 domain superfamily protein3.9e-1938.57Show/hide
Query:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPR--GIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHN
        M+ V+  +   +  L+A  + A SS+      + P  +          +   +   + PR  GI K   VSP +   +G  E SRT A+K IW +IK H+
Subjt:  MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPR--GIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHN

Query:  LQKPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        LQ P+DK+ I CDE L+ IF GKD+VGFLEI+ L+SPHF+
Subjt:  LQKPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL

AT4G34290.1 SWIB/MDM2 domain superfamily protein4.4e-3153.96Show/hide
Query:  FVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVT---FASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNL
        F +TF+  +++ L +   + +S    P+ P   NLR  R+VT    ASS   TT   R+PRGIMKPR VS  MQ +VG PEI RTQALK IW +IK+H+L
Subjt:  FVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVT---FASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNL

Query:  QKPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL
        Q P +K+ I+CDEKL+KIF GK+ VGFLEIA LI PHFL
Subjt:  QKPSDKKVIVCDEKLRKIFAGKDEVGFLEIAGLISPHFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCGTCTCCACCTTCATCTCCGGCGAGTCGTCGCTCCTCATCGCCAGAGGCGCCGCCGCCGCCTCCTCCGTCAAACATCCTTCTCAACCTCGTTCTCCTAATTT
GCGCTTCGCCCGTTCCGTTACCTTCGCTTCGAGCTCCAACCAGACCACTGCCCACGTCCGCCAGCCACGTGGCATCATGAAGCCCCGGAAGGTTTCGCCGGAGATGCAGG
CGCTCGTCGGCGCTCCCGAGATTTCCCGTACCCAAGCTCTGAAGCTCATTTGGATTCACATTAAACAACACAATCTTCAGAAACCAAGTGACAAGAAAGTCATAGTTTGC
GACGAGAAGCTGAGGAAAATATTTGCGGGGAAAGATGAAGTTGGGTTTCTGGAGATTGCAGGATTGATAAGTCCCCACTTTCTATGA
mRNA sequenceShow/hide mRNA sequence
TTTCAGAGAACCTGAATGGATTAAGGCGCGTTCAGAGTTTCGAGCTTCTCGTTCGGACCGCTTCGCTCTATCCATTTGCACCTTCAATCTCCGGCCATGGCTTTCGTCTC
CACCTTCATCTCCGGCGAGTCGTCGCTCCTCATCGCCAGAGGCGCCGCCGCCGCCTCCTCCGTCAAACATCCTTCTCAACCTCGTTCTCCTAATTTGCGCTTCGCCCGTT
CCGTTACCTTCGCTTCGAGCTCCAACCAGACCACTGCCCACGTCCGCCAGCCACGTGGCATCATGAAGCCCCGGAAGGTTTCGCCGGAGATGCAGGCGCTCGTCGGCGCT
CCCGAGATTTCCCGTACCCAAGCTCTGAAGCTCATTTGGATTCACATTAAACAACACAATCTTCAGAAACCAAGTGACAAGAAAGTCATAGTTTGCGACGAGAAGCTGAG
GAAAATATTTGCGGGGAAAGATGAAGTTGGGTTTCTGGAGATTGCAGGATTGATAAGTCCCCACTTTCTATGATAGTTTGAAGTATGGAAGAGATAGGCATCTGGGACAT
TCAGTTCAGTCCACGAAGATCAACTTTTTTGTTGTTGTGGGGGTTTCTCAATCTGGTTTATGTGAAGTTCAAGAGCCCCCCTTCTATATTTTGTTGTTTTTTATGTCTAG
TTGTTGAATAGAGAAGAAGCTTTTGTAAGAACTTCATTTGGAGGTTTATGTAGGTGGTGTTATATGGAAATCTTTGTTAGTCATTAGTTTGTGAAATCTTTCTCTTCTTA
CATTCTTTTTTTAAATAAGGGTAACCACGCTCGTCTCTAGGTCAGGTATCGGAGACATCGAAGGAGGAATGTTACAGTTGAATCTCGAACTTGAAACTTTGAATGGAGCA
TATCTTCGAAGTCCAAGTCTTAAACCAATATCTTGG
Protein sequenceShow/hide protein sequence
MAFVSTFISGESSLLIARGAAAASSVKHPSQPRSPNLRFARSVTFASSSNQTTAHVRQPRGIMKPRKVSPEMQALVGAPEISRTQALKLIWIHIKQHNLQKPSDKKVIVC
DEKLRKIFAGKDEVGFLEIAGLISPHFL