; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001649 (gene) of Chayote v1 genome

Gene IDSed0001649
OrganismSechium edule (Chayote v1)
DescriptionCRM domain-containing protein
Genome locationLG04:47200097..47202929
RNA-Seq ExpressionSed0001649
SyntenySed0001649
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588422.1 hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]3.7e-8169.18Show/hide
Query:  MGAPIISAHFHPLLLRPVPAS--------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEISYE
        M +P  S   H LLLR VP+S        +A ISAA   Q +PNSSIFL RQSPH  RSFT S+SVSFSRSFSS +SD + V F E+DD I+D  E  YE
Subjt:  MGAPIISAHFHPLLLRPVPAS--------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEISYE

Query:  DEDEIEDFELED-------------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPE
        DE EIEDFELED                    + SEVK+IPSLTVKEKKELASYA SLGKKLK Q+VGKSGVTPGLATSFIETLEANELLKIKVL NCP 
Subjt:  DEDEIEDFELED-------------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPE

Query:  ELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR
        ELEDVV QLEESTGSVVV++IGRT +IYRPS++KMK EEEKRRARK YVRKEPDRVK  LQNK+QT RSSNRGRRGSSR
Subjt:  ELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR

XP_004148536.1 uncharacterized protein LOC101213060 [Cucumis sativus]3.0e-8368Show/hide
Query:  MGAPIISAHFHPLLLRPVPAS----------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEIS
        MGA IIS+H H LLLR +P+S          AAAIS   F Q +P+SS  LTR+SPHH R FT S+ +SFSRSFSS +SD ++V+FDE DDEIED  E  
Subjt:  MGAPIISAHFHPLLLRPVPAS----------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEIS

Query:  YEDEDEIEDFELEDT-------------NRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELED
        YEDE E+ED   + T             +R+EVK+IPSLT+KEKKELASYA  LGKKLK Q+VGKSGVTPGLATSFIETLEANELLKIK+L NCPEELED
Subjt:  YEDEDEIEDFELEDT-------------NRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELED

Query:  VVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR
        VV +L ESTGSVVVNQIGRT +IYRPS+TKMK EEEKRRARK Y+RKEPDRVKSILQ KI+T +SSNRGRRG+SR
Subjt:  VVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR

XP_022971306.1 uncharacterized protein LOC111470060 [Cucurbita maxima]1.3e-8169.53Show/hide
Query:  MGAPIISAHFHPLLLRPVPAS--------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEISYE
        M +P  S   H LLLR VP+S        +A ISAA   Q +PNSSIFL RQSPH  RSFT S+SVSFSRSFSS +S  + V F E+DD I+D  E  YE
Subjt:  MGAPIISAHFHPLLLRPVPAS--------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEISYE

Query:  DEDEIEDFELED-------------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPE
        DE EIEDFELED                    +RSEVKSIPSLTVKEKKELASYA SLGKKLK Q+VGKSGVTPGLATSFIETLEANELLKIKVL NCP 
Subjt:  DEDEIEDFELED-------------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPE

Query:  ELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR
        ELEDVV QLEESTGSVVV++IGRT +IYRPS++KMK EEEKRRARK YVRKEPDRVK  LQNK+QT RSSNRGRRGSSR
Subjt:  ELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR

XP_023529380.1 uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]5.3e-8067.25Show/hide
Query:  MGAPIISAHFHPLLLRPVPAS--------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFD-----EEDDEIEDGG
        M +P  S   H LLLR VP+S        +AAISAA   Q +PNSSIFL RQSPH  RSF+ S+SVSFSRSFSS +SD + V F+     ++DDE +   
Subjt:  MGAPIISAHFHPLLLRPVPAS--------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFD-----EEDDEIEDGG

Query:  EISYEDEDEIEDFELED-------------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVL
        E+  EDE EIEDFELED                    +RSEVK+IPSLTVKEKKELASYA SLGKKLK Q+VGKSGVTPGLATSFIETLEANELLKIKVL
Subjt:  EISYEDEDEIEDFELED-------------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVL

Query:  DNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR
         NCP ELEDVV QLEESTGSVVV++IGRT +IYRPS++KMK EEEKRRARK YVRKEPDRVK  LQNK+QT RSSNRGRRGSSR
Subjt:  DNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR

XP_038888218.1 uncharacterized protein LOC120078082 [Benincasa hispida]1.2e-7967.87Show/hide
Query:  MGAPIISAHFHPLLLRPVPAS----------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEIS
        MGA IIS H H LLLR VP+S          AAA +A  F Q +P SS F TR+S HH RSF  S S+SF RSF+S +S  ++  FDE+DDEIED  E  
Subjt:  MGAPIISAHFHPLLLRPVPAS----------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEIS

Query:  YEDEDEIEDFE-LED--------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEEL
        YEDE EIE  E +ED               NR+EVK+IPSLT+KEKKELASYA SLGKKLK Q+VGKSGVTPGLATSFIETLEANELLKIK+L NCPEEL
Subjt:  YEDEDEIEDFE-LED--------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEEL

Query:  EDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR
        ED V +LEESTGSVVVNQIGRT +IYRPS+TKMK E++KR+ARK YVRKE DRVKSILQNKIQT RSSNRGRRGSSR
Subjt:  EDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein1.5e-8368Show/hide
Query:  MGAPIISAHFHPLLLRPVPAS----------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEIS
        MGA IIS+H H LLLR +P+S          AAAIS   F Q +P+SS  LTR+SPHH R FT S+ +SFSRSFSS +SD ++V+FDE DDEIED  E  
Subjt:  MGAPIISAHFHPLLLRPVPAS----------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEIS

Query:  YEDEDEIEDFELEDT-------------NRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELED
        YEDE E+ED   + T             +R+EVK+IPSLT+KEKKELASYA  LGKKLK Q+VGKSGVTPGLATSFIETLEANELLKIK+L NCPEELED
Subjt:  YEDEDEIEDFELEDT-------------NRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELED

Query:  VVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR
        VV +L ESTGSVVVNQIGRT +IYRPS+TKMK EEEKRRARK Y+RKEPDRVKSILQ KI+T +SSNRGRRG+SR
Subjt:  VVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR

A0A1S3BJF7 uncharacterized protein LOC1034903501.3e-7966.31Show/hide
Query:  MGAPIIS----AHFHPLLLRPVPAS----------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDG
        M A IIS    +H H LLLR VP+S           AA S   F Q +P+SS FLTR+SPH+ R FT S+S+SFSR FSS VS  ++V FDE DDEIED 
Subjt:  MGAPIIS----AHFHPLLLRPVPAS----------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDG

Query:  GEISYEDEDEIEDFELEDT-------------NRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPE
         E  YEDE E+ED   + T             NR+EVK+IPSLT+KEKKELASYA  LGKKLK Q+VGKSGVTPGLATSFIETLEANELLKIK+L NCPE
Subjt:  GEISYEDEDEIEDFELEDT-------------NRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPE

Query:  ELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR
        +LEDVV +LEESTGSVVVNQIGRT +IYRPS+TKMK EEEKRR+RK Y+RKEPDRVKSILQ K++T RSSNRGRRG+SR
Subjt:  ELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR

A0A5D3DFJ1 Putative RNA-binding CRS1 / YhbY domain protein4.3e-5984.35Show/hide
Query:  NRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPSL
        NR+EVK+IPSLT+KEKKELASYA  LGKKLK Q+VGKSGVTPGLATSFIETLEANELLKIK+L NCPEELEDVV +LEESTGSVVVNQIGRT +IYRPS+
Subjt:  NRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPSL

Query:  TKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR
        TKMK EEEKRR+RK Y+RKEPDRVKSILQ K++T RSSNRGRRG+SR
Subjt:  TKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR

A0A6J1C409 uncharacterized protein LOC1110077238.4e-5570.49Show/hide
Query:  YEDEDEIEDFELED-------------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNC
        YE E  I DFELE+                    N SEVK++PSLTVKEKKELASYA SLGKKLK Q+VGKSGVTPGLA SF+ETLEANELLKIK+L NC
Subjt:  YEDEDEIEDFELED-------------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNC

Query:  PEELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQT--VRSSNRGRRGSSR
        P EL+D V QLEESTGSVVV+QIGRT +IYRPS++KMK EE+KR+ARK YVRKEPDRVKSILQNK+QT  + +SNRGRRGSSR
Subjt:  PEELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQT--VRSSNRGRRGSSR

A0A6J1I2Z3 uncharacterized protein LOC1114700606.1e-8269.53Show/hide
Query:  MGAPIISAHFHPLLLRPVPAS--------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEISYE
        M +P  S   H LLLR VP+S        +A ISAA   Q +PNSSIFL RQSPH  RSFT S+SVSFSRSFSS +S  + V F E+DD I+D  E  YE
Subjt:  MGAPIISAHFHPLLLRPVPAS--------AAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEISYE

Query:  DEDEIEDFELED-------------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPE
        DE EIEDFELED                    +RSEVKSIPSLTVKEKKELASYA SLGKKLK Q+VGKSGVTPGLATSFIETLEANELLKIKVL NCP 
Subjt:  DEDEIEDFELED-------------------TNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPE

Query:  ELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR
        ELEDVV QLEESTGSVVV++IGRT +IYRPS++KMK EEEKRRARK YVRKEPDRVK  LQNK+QT RSSNRGRRGSSR
Subjt:  ELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY3.8e-0430Show/hide
Query:  SLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPS
        +L+ K+K+ L   A  L     + ++G +G+T G+     + LE +EL+K+K+     E    +V  +   TG+  V  IG+T ++YRP+
Subjt:  SLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPS

P0AGK5 RNA-binding protein YhbY3.8e-0430Show/hide
Query:  SLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPS
        +L+ K+K+ L   A  L     + ++G +G+T G+     + LE +EL+K+K+     E    +V  +   TG+  V  IG+T ++YRP+
Subjt:  SLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPS

P0AGK6 RNA-binding protein YhbY3.8e-0430Show/hide
Query:  SLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPS
        +L+ K+K+ L   A  L     + ++G +G+T G+     + LE +EL+K+K+     E    +V  +   TG+  V  IG+T ++YRP+
Subjt:  SLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPS

P0AGK7 RNA-binding protein YhbY3.8e-0430Show/hide
Query:  SLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPS
        +L+ K+K+ L   A  L     + ++G +G+T G+     + LE +EL+K+K+     E    +V  +   TG+  V  IG+T ++YRP+
Subjt:  SLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPS

P54454 Probable RNA-binding protein YqeI7.4e-0838.54Show/hide
Query:  LTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVE
        LT K+K+ L S A  L     I  VGK GV   +     E LEA EL+K+ VL NC E+  DV   L + + S +V  IG T ++Y+ S    ++E
Subjt:  LTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVE

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.0e-2843.12Show/hide
Query:  HPLLLRPVPASAAAISAASFRQLQPNSSIFLTRQSPHHL---------RSFTSSSSVSFSRSFSS---AVSDLADVVFDEEDDEIEDGGEISYEDEDEIE
        H LL    P S   +       L+P S   L R+S HH          R + S S +   +SFSS   +  D  +V      +EI D G+   ED  E+ 
Subjt:  HPLLLRPVPASAAAISAASFRQLQPNSSIFLTRQSPHHL---------RSFTSSSSVSFSRSFSS---AVSDLADVVFDEEDDEIEDGGEISYEDEDEIE

Query:  DFELEDTNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTA
           + +  RS   S   L+ KEK++LASYA  LG KLK Q+VGKSGVT  +  SF+ETLE NELLK+K+   CP ELED++++LEE+TGSV V QI RT 
Subjt:  DFELEDTNRSEVKSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTA

Query:  LIYRPSLTKMKVEEEKRR
        ++YRPS TK+K +E+K+R
Subjt:  LIYRPSLTKMKVEEEKRR

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein4.1e-3039.93Show/hide
Query:  LLLRPVPASAAAISAASFRQLQPNSSIFLTRQSPHH-----LRSFTSSSSVSFSRSFSSAVSDLADVVF---DEEDDEIEDGGEI----------SYEDE
        L LRP    +A++S ++ R  +P    F ++  P H     ++SF+S           S   D +   +   DEE+++ +D G +          + E+ 
Subjt:  LLLRPVPASAAAISAASFRQLQPNSSIFLTRQSPHH-----LRSFTSSSSVSFSRSFSSAVSDLADVVF---DEEDDEIEDGGEI----------SYEDE

Query:  DEIEDFELEDTNRSEVKSIPS---LTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVV
         EI D E +  N  + KS  S   L++KEKKELASYA SLG KLK Q+VGKSGVT  +  SF+ETLE NELLK+K+    P+ELED V  LEE+TGSV V
Subjt:  DEIEDFELEDTNRSEVKSIPS---LTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVV

Query:  NQIGRTALIYRPSLTKMKVEEEKRRA-------RKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR
         QIGRT ++YRPS TKMK E +K+         R+ Y    P +       +  + R   RGRRG SR
Subjt:  NQIGRTALIYRPSLTKMKVEEEKRRA-------RKTYVRKEPDRVKSILQNKIQTVRSSNRGRRGSSR

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein2.0e-2941.2Show/hide
Query:  LLLRPVPASAAAISAASFRQLQPNSSIFLTRQSPHH-----LRSFTSSSSVSFSRSFSSAVSDLADVVF---DEEDDEIEDGGEI----------SYEDE
        L LRP    +A++S ++ R  +P    F ++  P H     ++SF+S           S   D +   +   DEE+++ +D G +          + E+ 
Subjt:  LLLRPVPASAAAISAASFRQLQPNSSIFLTRQSPHH-----LRSFTSSSSVSFSRSFSSAVSDLADVVF---DEEDDEIEDGGEI----------SYEDE

Query:  DEIEDFELEDTNRSEVKSIPS---LTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVV
         EI D E +  N  + KS  S   L++KEKKELASYA SLG KLK Q+VGKSGVT  +  SF+ETLE NELLK+K+    P+ELED V  LEE+TGSV V
Subjt:  DEIEDFELEDTNRSEVKSIPS---LTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVV

Query:  NQIGRTALIYRPSLTKMKVEEEKRRARKTYVRK
         QIGRT ++YRPS TKMK E +K+   +  + +
Subjt:  NQIGRTALIYRPSLTKMKVEEEKRRARKTYVRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTCCTATAATTTCCGCTCACTTTCACCCTCTTCTTCTCCGGCCAGTTCCCGCTTCCGCCGCCGCCATCTCCGCCGCTTCCTTTCGTCAATTGCAACCTAACAG
TTCAATTTTCCTCACTCGCCAGTCTCCTCACCATTTACGGTCTTTCACTTCCTCTTCATCAGTTTCCTTCTCTCGCTCCTTTTCCTCCGCCGTTTCCGATCTCGCCGATG
TCGTATTTGACGAAGAAGACGATGAAATTGAGGATGGAGGTGAAATCAGTTACGAAGATGAAGATGAAATCGAAGATTTCGAACTGGAAGACACCAATAGAAGTGAAGTG
AAGAGTATTCCGAGTTTGACGGTCAAGGAGAAGAAAGAGTTGGCGTCGTACGCTCGTAGCCTGGGGAAGAAGCTGAAGATTCAGATGGTGGGAAAGTCTGGGGTTACTCC
TGGATTAGCCACTTCTTTCATTGAGACACTTGAAGCTAACGAGCTGCTCAAGATCAAAGTTCTGGATAACTGTCCTGAAGAGCTGGAAGATGTGGTTATGCAATTGGAGG
AATCAACTGGATCTGTGGTGGTCAATCAAATTGGCAGAACTGCTCTTATTTATAGGCCCAGCCTCACAAAAATGAAAGTGGAGGAAGAAAAACGACGAGCCCGAAAAACT
TATGTGAGAAAAGAACCCGATCGAGTGAAATCCATTTTGCAGAATAAAATACAAACAGTCAGGAGCTCGAATCGTGGTCGTCGTGGAAGCAGCAGATCGGGTTTTGATCT
TAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTCCTATAATTTCCGCTCACTTTCACCCTCTTCTTCTCCGGCCAGTTCCCGCTTCCGCCGCCGCCATCTCCGCCGCTTCCTTTCGTCAATTGCAACCTAACAG
TTCAATTTTCCTCACTCGCCAGTCTCCTCACCATTTACGGTCTTTCACTTCCTCTTCATCAGTTTCCTTCTCTCGCTCCTTTTCCTCCGCCGTTTCCGATCTCGCCGATG
TCGTATTTGACGAAGAAGACGATGAAATTGAGGATGGAGGTGAAATCAGTTACGAAGATGAAGATGAAATCGAAGATTTCGAACTGGAAGACACCAATAGAAGTGAAGTG
AAGAGTATTCCGAGTTTGACGGTCAAGGAGAAGAAAGAGTTGGCGTCGTACGCTCGTAGCCTGGGGAAGAAGCTGAAGATTCAGATGGTGGGAAAGTCTGGGGTTACTCC
TGGATTAGCCACTTCTTTCATTGAGACACTTGAAGCTAACGAGCTGCTCAAGATCAAAGTTCTGGATAACTGTCCTGAAGAGCTGGAAGATGTGGTTATGCAATTGGAGG
AATCAACTGGATCTGTGGTGGTCAATCAAATTGGCAGAACTGCTCTTATTTATAGGCCCAGCCTCACAAAAATGAAAGTGGAGGAAGAAAAACGACGAGCCCGAAAAACT
TATGTGAGAAAAGAACCCGATCGAGTGAAATCCATTTTGCAGAATAAAATACAAACAGTCAGGAGCTCGAATCGTGGTCGTCGTGGAAGCAGCAGATCGGGTTTTGATCT
TAAGTAG
Protein sequenceShow/hide protein sequence
MGAPIISAHFHPLLLRPVPASAAAISAASFRQLQPNSSIFLTRQSPHHLRSFTSSSSVSFSRSFSSAVSDLADVVFDEEDDEIEDGGEISYEDEDEIEDFELEDTNRSEV
KSIPSLTVKEKKELASYARSLGKKLKIQMVGKSGVTPGLATSFIETLEANELLKIKVLDNCPEELEDVVMQLEESTGSVVVNQIGRTALIYRPSLTKMKVEEEKRRARKT
YVRKEPDRVKSILQNKIQTVRSSNRGRRGSSRSGFDLK