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Sed0001670 (gene) of Chayote v1 genome

Gene IDSed0001670
OrganismSechium edule (Chayote v1)
Descriptionprotein BOLA4, chloroplastic/mitochondrial
Genome locationLG01:65649958..65653820
RNA-Seq ExpressionSed0001670
SyntenySed0001670
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsIPR002634 - BolA protein
IPR036065 - BolA-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605693.1 Protein BOLA4, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.2e-5067.05Show/hide
Query:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME
        MIKVPQ+A R VLPLFVHRN +F +VS+QF TNCVR    +AAI TT+ T   SKS NV K SY NGR S WGSSR++C+RATQVNDSGS+DSPLMQSME
Subjt:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME

Query:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
         K+KEQL+AQSV+++ +Y         +  S   G++AVNRQRMVYKAIWEELQSTVHAVDQMTT TPAEA AQ S
Subjt:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
KAG7035601.1 Protein BOLA4, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-5067.05Show/hide
Query:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME
        MIKVPQ+A R VLPLFVHRN +F +VS+QF T+CVR    +AAI TT+ TG  SKS NV K SY N RFS WGSSR++C+RATQVNDSGS+DSPLMQSME
Subjt:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME

Query:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
         K+KEQL+AQSV+++ +Y         +  S   G++AVNRQRMVYKAIWEELQSTVHAVDQMTT TPAEA AQ S
Subjt:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
XP_022958680.1 protein BOLA4, chloroplastic/mitochondrial [Cucurbita moschata]2.8e-5067.05Show/hide
Query:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME
        MIKVPQ+A R VLPLFVHRN +F +VS+QF TNCVR    +AAI TT+ T   SKS NV K SY NGR S WGSSR++C+RATQVNDSGS+DSPLMQSME
Subjt:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME

Query:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
         K+KEQL+AQSV+++ +Y         +  S   G++AVNRQRMVYKAIWEELQSTVHAVDQMTT TPAEA AQ S
Subjt:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
XP_022996142.1 protein BOLA4, chloroplastic/mitochondrial [Cucurbita maxima]6.1e-5368.16Show/hide
Query:  STRMIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQ
        STRMIKVPQ+A R VLPLFVHRN +F +VS+QF TNCVR    +AAI TT+ TG  SKS NV K SY NGRFS WGSSR++C+RATQVNDSGS+DSPLMQ
Subjt:  STRMIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQ

Query:  SMEKKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
        SME K+KEQL+AQSV+++ +Y         +  S   G++AVNRQRMVYKAIWEELQSTVHAVDQMTT TP EA AQ S
Subjt:  SMEKKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
XP_023534696.1 protein BOLA4, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]9.7e-5167.61Show/hide
Query:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME
        MIK PQ+A R VLPL VHRN +F VVS+QF TNCVR    +AAI TT+ TG  SKS NV K SY NGRFS WGSSR++C+RATQVNDSGS+DSPLMQSME
Subjt:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME

Query:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
         K+KEQL+AQSV+++ +Y         +  S   G++AVNRQRMVYKAIWEELQSTVHAVDQMTT TPAEA AQ S
Subjt:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
TrEMBL top hitse value%identityAlignment
A0A0A0KRR5 Uncharacterized protein1.1e-4766.48Show/hide
Query:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCV----RAAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME
        MIKVPQ+A R VLP+F+ RN  F VVSRQ  +NCV      A I +TSTTG  SKS NV+K S ANG F KWGSSR+L IRATQVN+SGS+DSPLMQSME
Subjt:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCV----RAAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME

Query:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
         K+KEQLDAQSV+++ +Y         +  S   G++AVNRQRMVYKAIWEELQSTVHAVDQMTT TPAEAAAQ S
Subjt:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
A0A1S3CT29 protein BOLA4, chloroplastic/mitochondrial5.9e-4665.34Show/hide
Query:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVRAAA----IATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME
        MIKVPQ+A R VLP+ + RN  F VVSRQ  +NCV  AA    I + S TG  SKS NV K S ANG F KWGSSR+L IRATQVN+SGS+DSPLMQSME
Subjt:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVRAAA----IATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME

Query:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
         K+KEQLDAQSV+++ +Y         +  S   G++AVNRQRMVYKAIWEELQSTVHAVDQMTT TPAEAAAQ S
Subjt:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
A0A6J1DZG6 protein BOLA4, chloroplastic/mitochondrial5.7e-4967.82Show/hide
Query:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR--AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSMEKK
        M++VPQ+A R VLPLFVHR+  F VVSRQ  TNCVR  AAAI++ +TT    KS NV+K   ANG FSKWGSSR+L IRATQVNDSGS+DSPLMQSME K
Subjt:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR--AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSMEKK

Query:  MKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
        +KEQLDAQSVT++ +Y         +  S   G+SAVNRQRMVYKAIWEELQSTVHAVDQMTT TPAEAA + S
Subjt:  MKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
A0A6J1H464 protein BOLA4, chloroplastic/mitochondrial1.4e-5067.05Show/hide
Query:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME
        MIKVPQ+A R VLPLFVHRN +F +VS+QF TNCVR    +AAI TT+ T   SKS NV K SY NGR S WGSSR++C+RATQVNDSGS+DSPLMQSME
Subjt:  MIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSME

Query:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
         K+KEQL+AQSV+++ +Y         +  S   G++AVNRQRMVYKAIWEELQSTVHAVDQMTT TPAEA AQ S
Subjt:  KKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
A0A6J1K139 protein BOLA4, chloroplastic/mitochondrial2.9e-5368.16Show/hide
Query:  STRMIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQ
        STRMIKVPQ+A R VLPLFVHRN +F +VS+QF TNCVR    +AAI TT+ TG  SKS NV K SY NGRFS WGSSR++C+RATQVNDSGS+DSPLMQ
Subjt:  STRMIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVR----AAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQ

Query:  SMEKKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
        SME K+KEQL+AQSV+++ +Y         +  S   G++AVNRQRMVYKAIWEELQSTVHAVDQMTT TP EA AQ S
Subjt:  SMEKKMKEQLDAQSVTLQFSY---------ICFSM--GKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS
SwissProt top hitse value%identityAlignment
Q9LF68 Protein BOLA4, chloroplastic/mitochondrial3.1e-2049.59Show/hide
Query:  SKSRNVSKSSYAN--GRFSKWGS----SRDLCIRATQVNDSGSVDSPLMQSMEKKMKEQLDAQSVTL-----QFSYICFSM------GKSAVNRQRMVYK
        S+      S Y N   R S +G+    S +   +++Q+ND+GS+D  LMQSME K+KEQL+A+SVT+        ++C ++      G+SAVNRQRMVYK
Subjt:  SKSRNVSKSSYAN--GRFSKWGS----SRDLCIRATQVNDSGSVDSPLMQSMEKKMKEQLDAQSVTL-----QFSYICFSM------GKSAVNRQRMVYK

Query:  AIWEELQSTVHAVDQMTTTTPAE
        AIWEELQ+ VHAVDQMTT TP+E
Subjt:  AIWEELQSTVHAVDQMTTTTPAE
Arabidopsis top hitse value%identityAlignment
AT5G17560.1 BolA-like family protein2.2e-2149.59Show/hide
Query:  SKSRNVSKSSYAN--GRFSKWGS----SRDLCIRATQVNDSGSVDSPLMQSMEKKMKEQLDAQSVTL-----QFSYICFSM------GKSAVNRQRMVYK
        S+      S Y N   R S +G+    S +   +++Q+ND+GS+D  LMQSME K+KEQL+A+SVT+        ++C ++      G+SAVNRQRMVYK
Subjt:  SKSRNVSKSSYAN--GRFSKWGS----SRDLCIRATQVNDSGSVDSPLMQSMEKKMKEQLDAQSVTL-----QFSYICFSM------GKSAVNRQRMVYK

Query:  AIWEELQSTVHAVDQMTTTTPAE
        AIWEELQ+ VHAVDQMTT TP+E
Subjt:  AIWEELQSTVHAVDQMTTTTPAE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACGAGGATGATCAAGGTTCCGCAAATCGCGCTCCGTAGCGTTCTTCCACTGTTCGTTCACCGCAACGGCCGGTTTCCGGTTGTCTCCCGTCAATTTCCGACCAA
CTGTGTCCGCGCCGCCGCAATCGCCACCACATCCACCACCGGCTTCCATAGTAAGAGCCGGAATGTTTCGAAATCAAGCTATGCTAATGGAAGATTCTCAAAATGGGGCT
CGAGTCGGGATTTGTGTATTAGAGCCACTCAAGTGAATGACTCTGGATCTGTTGATTCTCCGCTTATGCAGTCAATGGAGAAAAAGATGAAGGAACAATTAGATGCACAG
TCTGTCACGTTGCAATTTTCCTACATTTGCTTTTCTATGGGGAAATCGGCTGTTAACCGGCAGAGGATGGTATACAAAGCTATTTGGGAGGAGCTACAGAGCACAGTGCA
TGCAGTGGATCAGATGACCACCACAACACCCGCTGAAGCCGCAGCTCAGACCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACGAGGATGATCAAGGTTCCGCAAATCGCGCTCCGTAGCGTTCTTCCACTGTTCGTTCACCGCAACGGCCGGTTTCCGGTTGTCTCCCGTCAATTTCCGACCAA
CTGTGTCCGCGCCGCCGCAATCGCCACCACATCCACCACCGGCTTCCATAGTAAGAGCCGGAATGTTTCGAAATCAAGCTATGCTAATGGAAGATTCTCAAAATGGGGCT
CGAGTCGGGATTTGTGTATTAGAGCCACTCAAGTGAATGACTCTGGATCTGTTGATTCTCCGCTTATGCAGTCAATGGAGAAAAAGATGAAGGAACAATTAGATGCACAG
TCTGTCACGTTGCAATTTTCCTACATTTGCTTTTCTATGGGGAAATCGGCTGTTAACCGGCAGAGGATGGTATACAAAGCTATTTGGGAGGAGCTACAGAGCACAGTGCA
TGCAGTGGATCAGATGACCACCACAACACCCGCTGAAGCCGCAGCTCAGACCTCATAA
Protein sequenceShow/hide protein sequence
MSTRMIKVPQIALRSVLPLFVHRNGRFPVVSRQFPTNCVRAAAIATTSTTGFHSKSRNVSKSSYANGRFSKWGSSRDLCIRATQVNDSGSVDSPLMQSMEKKMKEQLDAQ
SVTLQFSYICFSMGKSAVNRQRMVYKAIWEELQSTVHAVDQMTTTTPAEAAAQTS