; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001679 (gene) of Chayote v1 genome

Gene IDSed0001679
OrganismSechium edule (Chayote v1)
Descriptionacidic mammalian chitinase-like
Genome locationLG10:31213871..31214743
RNA-Seq ExpressionSed0001679
SyntenySed0001679
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
InterPro domainsIPR001223 - Glycoside hydrolase family 18, catalytic domain
IPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599362.1 Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3266.94Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS
        +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S+TYQVTIDPSQ ILI QFSS VK SNPEVKTLLSIAA               + FIKS
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS

Query:  SIEMARAGEFDGLDLQWLYPS
        SI  AR G FDGLDLQWLYPS
Subjt:  SIEMARAGEFDGLDLQWLYPS

KAG6599434.1 Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia]4.3e-3266.12Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS
        +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S+TYQVTIDPS  ILI QFSS VK SNPEVKTLLSIAA               + FIKS
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS

Query:  SIEMARAGEFDGLDLQWLYPS
        SI  AR G FDGLDLQWLYPS
Subjt:  SIEMARAGEFDGLDLQWLYPS

KAG6599437.1 Class V chitinase, partial [Cucurbita argyrosperma subsp. sororia]4.3e-3266.12Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS
        +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S+TYQVTIDPS  ILI QFSS VK SNPEVKTLLSIAA               + FIKS
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS

Query:  SIEMARAGEFDGLDLQWLYPS
        SI  AR G FDGLDLQWLYPS
Subjt:  SIEMARAGEFDGLDLQWLYPS

KAG7030350.1 Chitotriosidase-1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-3266.12Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS
        +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S+TYQVTIDPS  ILI QFSS VK SNPEVKTLLSIAA               + FIKS
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS

Query:  SIEMARAGEFDGLDLQWLYPS
        SI  AR G FDGLDLQWLYPS
Subjt:  SIEMARAGEFDGLDLQWLYPS

XP_022946077.1 acidic mammalian chitinase-like [Cucurbita moschata]4.3e-3266.12Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS
        +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S TYQVT+DPSQ ILI QFSS VK SNPEVKTLLSIAA               + FIKS
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS

Query:  SIEMARAGEFDGLDLQWLYPS
        SI  AR G FDGLDLQWLYPS
Subjt:  SIEMARAGEFDGLDLQWLYPS

TrEMBL top hitse value%identityAlignment
A0A6J1G2P4 acidic mammalian chitinase-like2.1e-3266.12Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS
        +  T  VNAGYWLA+T+D LP ANIDA+LFTHLF GYA + S TYQVT+DPSQ ILI QFSS VK SNPEVKTLLSIAA               + FIKS
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS

Query:  SIEMARAGEFDGLDLQWLYPS
        SI  AR G FDGLDLQWLYPS
Subjt:  SIEMARAGEFDGLDLQWLYPS

A0A6J1G4H5 chitotriosidase-1-like isoform X15.1e-3159.26Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS
        +  T  VNAGYWLA+TND L  ANIDA+LFTHLFVGYA +  +T+QVT+DPSQ ILI QFSS VK SNP+VKTLLSIAA               + FIKS
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS

Query:  SIEMARAGEFDGLDLQWLYPS--YGANSWRLFCHN
        SI  AR G FDGLDLQWLYPS  Y   +++   H+
Subjt:  SIEMARAGEFDGLDLQWLYPS--YGANSWRLFCHN

A0A6J1G4J9 acidic mammalian chitinase-like isoform X21.5e-3061.24Show/hide
Query:  VNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMAR
        VNAGYWLA T+DTL  ANIDA+LFTHLFVGYA +  +T+QVT+DPSQ ILI QFSS VK SNP+VKTLLSIAA               + FIKSSI  AR
Subjt:  VNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKSSIEMAR

Query:  AGEFDGLDLQWLYPS--YGANSWRLFCHN
         G FDGLDLQWLYPS  Y   +++   H+
Subjt:  AGEFDGLDLQWLYPS--YGANSWRLFCHN

A0A6J1KB82 chitotriosidase-1-like6.0e-3264.46Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS
        +  T  VNAGYWLA+T+ TLP ANIDA+LFTHLF GYA + S+TYQVT+DPSQ ILI QFSS VK SNP+VKTLLSIA                + FIKS
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS

Query:  SIEMARAGEFDGLDLQWLYPS
        SI  AR G FDGLDLQWLYPS
Subjt:  SIEMARAGEFDGLDLQWLYPS

A0A6J1KFT3 chitotriosidase-1-like1.7e-3164.46Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS
        +  T  VNAGYWLA+T+ TLP ANIDA+LFTHLF GYA + S+TYQVT+DPSQ ILI QFSS VK SNP VKTLLSIA                + FIKS
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG--------------NIFIKS

Query:  SIEMARAGEFDGLDLQWLYPS
        SI  AR G FDGLDLQWLYPS
Subjt:  SIEMARAGEFDGLDLQWLYPS

SwissProt top hitse value%identityAlignment
A0A072UR65 Class V chitinase CHIT5b2.8e-1033.87Show/hide
Query:  ASQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSI-AAGN----------------I
        +S + T V   YWL   N   P   +D SLFTH+F  +    + TY++ I  SQ + +  F+   K  +P   TL SI  AG+                 
Subjt:  ASQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSI-AAGN----------------I

Query:  FIKSSIEMARAGEFDGLDLQWLYP
        FI S+I++AR   FDG+DL W +P
Subjt:  FIKSSIEMARAGEFDGLDLQWLYP

A0A072VEP0 Class V chitinase CHIT5a4.9e-0733.9Show/hide
Query:  VNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQ-FSSIVKQSNPEVKTLLSIAAG-----------------NIFIKSSI
        V + YW A   D    + ID + FTH+ + +      ++++ I  S  I  GQ F   ++  +P VKTLLSI  G                  IFI S+I
Subjt:  VNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQ-FSSIVKQSNPEVKTLLSIAAG-----------------NIFIKSSI

Query:  EMARAGEFDGLDLQWLYP
        E+AR   FDG+DL W +P
Subjt:  EMARAGEFDGLDLQWLYP

O81862 Class V chitinase2.6e-1641.13Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG-----------------NIF
        S   T+V A YW   +    PV +ID+SLFTHLF  +A + S+T QVT+  +       F+  V++ NP VKTLLSI  G                   F
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG-----------------NIF

Query:  IKSSIEMARAGEFDGLDLQWLYPS
        I SSI +AR+  F GLDL W YPS
Subjt:  IKSSIEMARAGEFDGLDLQWLYPS

Q15782 Chitinase-3-like protein 24.2e-0629.46Show/hide
Query:  NIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAGNI-----------------FIKSSIEMARAGEFDGLDLQWLYP
        NID  L +HL   +A +  E  +V I    ++++ Q  + +K  NP++K LLSI                      FI S I   R   FDGLD+ W+YP
Subjt:  NIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAGNI-----------------FIKSSIEMARAGEFDGLDLQWLYP

Query:  SYGANS-WRLFCHNLDDDRVKFMTLDDKD
            N+ + +  H L +   K  T   K+
Subjt:  SYGANS-WRLFCHNLDDDRVKFMTLDDKD

U5N4E3 Nod factor hydrolase protein 13.4e-0830.16Show/hide
Query:  TTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIG----QFSSIVKQSNPEVKTLLSI-----------------AAGN
        +TT V   YW+   N   P ++ID SLFTH+F  +      TY++  +      +      F++  K   P + TLLSI                  A  
Subjt:  TTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIG----QFSSIVKQSNPEVKTLLSI-----------------AAGN

Query:  IFIKSSIEMARAGEFDGLDLQWLYPS
         FI S+I++AR   FDG+D  W +P+
Subjt:  IFIKSSIEMARAGEFDGLDLQWLYPS

Arabidopsis top hitse value%identityAlignment
AT4G19750.1 Glycosyl hydrolase family protein with chitinase insertion domain6.4e-1839.84Show/hide
Query:  QTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIA------------AGN-----IFI
        +T ++V A YW+    +  P  NID++ FTHLF  +A V S T++VTI  +    +  F+  VK  N +V+TLLSI             A N      FI
Subjt:  QTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIA------------AGN-----IFI

Query:  KSSIEMARAGEFDGLDLQWLYPS
         SSI++AR  +F GLDL W YPS
Subjt:  KSSIEMARAGEFDGLDLQWLYPS

AT4G19760.1 Glycosyl hydrolase family protein with chitinase insertion domain6.6e-1537.4Show/hide
Query:  QTTTLVNAGYWLAN--------TNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIA------------AGN
        +T ++V A YW  +         +   P + ID++LFTHLF  +A V S T++VTI  +       F+  VK+ N +V+TLLSI             A N
Subjt:  QTTTLVNAGYWLAN--------TNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIA------------AGN

Query:  -----IFIKSSIEMARAGEFDGLDLQWLYPS
              FI SSI++AR  +F GLDL W YPS
Subjt:  -----IFIKSSIEMARAGEFDGLDLQWLYPS

AT4G19800.1 Glycosyl hydrolase family protein with chitinase insertion domain2.0e-1640.68Show/hide
Query:  LVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAGNI-----------------FIKSSI
        +V A YW   T+   P  +ID+SLFTHLF  +A + +E+Y++TI          F+  V+Q NP VKTLLSI  GN                  FI+S+I
Subjt:  LVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAGNI-----------------FIKSSI

Query:  EMARAGEFDGLDLQWLYP
         +AR+  F GLDL W YP
Subjt:  EMARAGEFDGLDLQWLYP

AT4G19810.1 Glycosyl hydrolase family protein with chitinase insertion domain1.9e-1741.13Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG-----------------NIF
        S   T+V A YW   +    PV +ID+SLFTHLF  +A + S+T QVT+  +       F+  V++ NP VKTLLSI  G                   F
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAG-----------------NIF

Query:  IKSSIEMARAGEFDGLDLQWLYPS
        I SSI +AR+  F GLDL W YPS
Subjt:  IKSSIEMARAGEFDGLDLQWLYPS

AT4G19820.1 Glycosyl hydrolase family protein with chitinase insertion domain1.9e-1740.32Show/hide
Query:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSI-----------------AAGNIF
        S   T+V A YW A +    P+A ID+SLFTHLF  +A + + TYQV +          F+  V++ NP VKTLLSI                  +  +F
Subjt:  SQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSI-----------------AAGNIF

Query:  IKSSIEMARAGEFDGLDLQWLYPS
        I SSI++AR+  F GLDL W YPS
Subjt:  IKSSIEMARAGEFDGLDLQWLYPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCCAAACCACAACATTGGTGAATGCTGGTTATTGGCTTGCCAATACGAATGATACACTTCCAGTTGCAAATATCGATGCTAGTCTTTTCACCCATTTGTTTGT
TGGTTATGCTGGTGTCACCTCCGAAACTTATCAAGTCACCATAGATCCTTCTCAAGATATCCTAATTGGGCAATTTTCTTCCATTGTGAAACAAAGCAATCCTGAGGTTA
AAACTTTATTGTCCATTGCAGCAGGGAACATCTTCATCAAATCTTCCATTGAAATGGCCAGGGCAGGGGAGTTTGATGGGCTTGATCTCCAATGGTTATACCCATCATAT
GGTGCCAACTCTTGGAGATTATTCTGCCACAACCTAGATGATGATCGAGTGAAGTTCATGACTCTTGATGACAAGGATCCACACTCTTCAAGCATACGCCACTTTTATCC
GTTTATTTATTTTTATTTTGTAGTAGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCCAAACCACAACATTGGTGAATGCTGGTTATTGGCTTGCCAATACGAATGATACACTTCCAGTTGCAAATATCGATGCTAGTCTTTTCACCCATTTGTTTGT
TGGTTATGCTGGTGTCACCTCCGAAACTTATCAAGTCACCATAGATCCTTCTCAAGATATCCTAATTGGGCAATTTTCTTCCATTGTGAAACAAAGCAATCCTGAGGTTA
AAACTTTATTGTCCATTGCAGCAGGGAACATCTTCATCAAATCTTCCATTGAAATGGCCAGGGCAGGGGAGTTTGATGGGCTTGATCTCCAATGGTTATACCCATCATAT
GGTGCCAACTCTTGGAGATTATTCTGCCACAACCTAGATGATGATCGAGTGAAGTTCATGACTCTTGATGACAAGGATCCACACTCTTCAAGCATACGCCACTTTTATCC
GTTTATTTATTTTTATTTTGTAGTAGTATAG
Protein sequenceShow/hide protein sequence
MASQTTTLVNAGYWLANTNDTLPVANIDASLFTHLFVGYAGVTSETYQVTIDPSQDILIGQFSSIVKQSNPEVKTLLSIAAGNIFIKSSIEMARAGEFDGLDLQWLYPSY
GANSWRLFCHNLDDDRVKFMTLDDKDPHSSSIRHFYPFIYFYFVVV