; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001693 (gene) of Chayote v1 genome

Gene IDSed0001693
OrganismSechium edule (Chayote v1)
DescriptionLOB domain-containing protein
Genome locationLG13:1112161..1113005
RNA-Seq ExpressionSed0001693
SyntenySed0001693
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014789.1 LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-5375.51Show/hide
Query:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK
        MISGRCAACKY+RR+C SDCIFSPFFPSNNPQRF+IVH+IYGASNVAKFLHQ+PVHLR EAAE+LF+EAKCRIEDPVYG VGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK

Query:  TRAEIA-----------------PIQGPNC-----VGLSAPAHLFNS
        TRAEIA                 PIQGPN      +GLS PAH FNS
Subjt:  TRAEIA-----------------PIQGPNC-----VGLSAPAHLFNS

XP_004140854.1 LOB domain-containing protein 24 [Cucumis sativus]5.8e-5474.67Show/hide
Query:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK
        MISGRCAACKY+RR+C SDCIFSPFFPSNNPQRF+IVH+IYGASNVAKFLHQ+P HLRAEAAETL +EAKCRIEDPVYG VGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK

Query:  TRAEIA------------------PIQGPNCV-----GLSAPAHLFNSSF
        TRAEIA                  PIQGPN V     GLS PAH FNS+F
Subjt:  TRAEIA------------------PIQGPNCV-----GLSAPAHLFNSSF

XP_008439169.1 PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]3.4e-5474.83Show/hide
Query:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK
        MISGRCAACKY+RR+C SDCIFSPFFPSNNPQRF+IVH+IYGASNVAKFLHQ+P HLR EAAETL +EAKCRIEDPVYG VGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK

Query:  TRAEIA-------------------PIQGPNCV-----GLSAPAHLFNSSF
        TRAEIA                   PIQGPN V     GLS+PAH FNSSF
Subjt:  TRAEIA-------------------PIQGPNCV-----GLSAPAHLFNSSF

XP_022985104.1 LOB domain-containing protein 24-like [Cucurbita maxima]1.5e-5476.35Show/hide
Query:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK
        MISGRCAACKY+RR+C SDCIFSPFFPSNNPQRF+IVH+IYGASNVAKFLHQ+PVHLRAEAAETLF+EAKCRIEDPVYG VGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK

Query:  TRAEIA------------------PIQGPNC-----VGLSAPAHLFNS
        TRAEIA                  PIQGPN      +GLS PAH FNS
Subjt:  TRAEIA------------------PIQGPNC-----VGLSAPAHLFNS

XP_023522202.1 LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]9.9e-5475.51Show/hide
Query:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK
        MISGRCAACKY+RR+C SDCIFSPFFPSNNPQRF+IVH+IYGASNVAKFLHQ+P+HLR EAAETLF+EAKCRIEDPVYG VGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK

Query:  TRAEIA-----------------PIQGPNC-----VGLSAPAHLFNS
        TRAEIA                 PIQGPN      +GLS PAH FNS
Subjt:  TRAEIA-----------------PIQGPNC-----VGLSAPAHLFNS

TrEMBL top hitse value%identityAlignment
A0A0A0L9N7 LOB domain-containing protein2.8e-5474.67Show/hide
Query:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK
        MISGRCAACKY+RR+C SDCIFSPFFPSNNPQRF+IVH+IYGASNVAKFLHQ+P HLRAEAAETL +EAKCRIEDPVYG VGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK

Query:  TRAEIA------------------PIQGPNCV-----GLSAPAHLFNSSF
        TRAEIA                  PIQGPN V     GLS PAH FNS+F
Subjt:  TRAEIA------------------PIQGPNCV-----GLSAPAHLFNSSF

A0A0A0LLX6 LOB domain-containing protein3.7e-4666.21Show/hide
Query:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK
        MI  RCAACKY+RR+C S+CIFSP+FPSNNPQRF+IVH+IYGASNVAKFL Q+P+ LR EAAETL++EAKCRIEDP+YG VGIISQLQ++LHVAETQLAK
Subjt:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK

Query:  TRAEIA------------------PIQGPNCVGLSAPAHLFNSSF
        TRAEIA                  P  GP   GLS PAH     F
Subjt:  TRAEIA------------------PIQGPNCVGLSAPAHLFNSSF

A0A1S3AY36 LOB domain-containing protein 24-like1.6e-5474.83Show/hide
Query:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK
        MISGRCAACKY+RR+C SDCIFSPFFPSNNPQRF+IVH+IYGASNVAKFLHQ+P HLR EAAETL +EAKCRIEDPVYG VGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK

Query:  TRAEIA-------------------PIQGPNCV-----GLSAPAHLFNSSF
        TRAEIA                   PIQGPN V     GLS+PAH FNSSF
Subjt:  TRAEIA-------------------PIQGPNCV-----GLSAPAHLFNSSF

A0A6J1E5I6 LOB domain-containing protein 24-like1.1e-5374.83Show/hide
Query:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK
        MISGRCAACKY+RR+C SDCIFSPFFPSNNPQRF+IVH+IYGASNVAKFLHQ+P+HLR EAAE+LF+EAKCRIEDPVYG VGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK

Query:  TRAEIA-----------------PIQGPNC-----VGLSAPAHLFNS
        TRAEIA                 PIQGPN      +GLS PAH FNS
Subjt:  TRAEIA-----------------PIQGPNC-----VGLSAPAHLFNS

A0A6J1JCD0 LOB domain-containing protein 24-like7.4e-5576.35Show/hide
Query:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK
        MISGRCAACKY+RR+C SDCIFSPFFPSNNPQRF+IVH+IYGASNVAKFLHQ+PVHLRAEAAETLF+EAKCRIEDPVYG VGIISQLQHQLHVAETQLAK
Subjt:  MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAK

Query:  TRAEIA------------------PIQGPNC-----VGLSAPAHLFNS
        TRAEIA                  PIQGPN      +GLS PAH FNS
Subjt:  TRAEIA------------------PIQGPNC-----VGLSAPAHLFNS

SwissProt top hitse value%identityAlignment
P59467 LOB domain-containing protein 231.5e-3360.95Show/hide
Query:  RCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAE
        RCAACKY+RR+C  DC+FSP+FP N+PQ+F+ VH+IYGA NV+K L Q+P   RAEA E+L +EAKCR++DPVYG VGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAE

Query:  IAPIQ
        IA  Q
Subjt:  IAPIQ

P59468 LOB domain-containing protein 241.5e-3360.95Show/hide
Query:  RCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAE
        RCAACKY+RR+C  DC+FSP+FP N+PQ+F+ VH+IYGA NV+K L Q+P   RAEA E+L +EAKCR++DPVYG VGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAE

Query:  IAPIQ
        IA  Q
Subjt:  IAPIQ

Q8LBW3 LOB domain-containing protein 122.3e-2952.73Show/hide
Query:  SGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTR
        S  CA+CK +RR+C  DCIF+P+FP ++P +F+IVH+++GASNV+K L ++PVH RA+A  +L +EA  R+ DPVYG VG IS LQ+Q+   + QLA  +
Subjt:  SGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTR

Query:  AEIAPIQGPN
        AEI  IQ  N
Subjt:  AEIAPIQGPN

Q9FKZ3 LOB domain-containing protein 362.0e-2848.21Show/hide
Query:  SGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTR
        S  CAACK++RRKC  +C+F+P+FP + PQ+F+ VH+++GASNVAK L+++  + R +A  +LFYEA+ R+ DPVYG VG+IS LQH+L      L   +
Subjt:  SGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTR

Query:  AEIAPIQGPNCV
         E+A   GP  +
Subjt:  AEIAPIQGPNCV

Q9SHE9 LOB domain-containing protein 46.7e-2950.96Show/hide
Query:  CAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAEI
        CAACK +RR+C  DC+FSP+FP++ PQ+F+ VH+++GASNV K L ++P+H R +A  ++ YEA  R+ DPVYG VG IS LQ Q+ V + QLA  +AE+
Subjt:  CAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAEI

Query:  APIQ
          ++
Subjt:  APIQ

Arabidopsis top hitse value%identityAlignment
AT1G31320.1 LOB domain-containing protein 44.8e-3050.96Show/hide
Query:  CAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAEI
        CAACK +RR+C  DC+FSP+FP++ PQ+F+ VH+++GASNV K L ++P+H R +A  ++ YEA  R+ DPVYG VG IS LQ Q+ V + QLA  +AE+
Subjt:  CAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAEI

Query:  APIQ
          ++
Subjt:  APIQ

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein1.6e-3052.73Show/hide
Query:  SGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTR
        S  CA+CK +RR+C  DCIF+P+FP ++P +F+IVH+++GASNV+K L ++PVH RA+A  +L +EA  R+ DPVYG VG IS LQ+Q+   + QLA  +
Subjt:  SGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTR

Query:  AEIAPIQGPN
        AEI  IQ  N
Subjt:  AEIAPIQGPN

AT3G26620.1 LOB domain-containing protein 231.1e-3460.95Show/hide
Query:  RCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAE
        RCAACKY+RR+C  DC+FSP+FP N+PQ+F+ VH+IYGA NV+K L Q+P   RAEA E+L +EAKCR++DPVYG VGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAE

Query:  IAPIQ
        IA  Q
Subjt:  IAPIQ

AT3G26660.1 LOB domain-containing protein 241.1e-3460.95Show/hide
Query:  RCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAE
        RCAACKY+RR+C  DC+FSP+FP N+PQ+F+ VH+IYGA NV+K L Q+P   RAEA E+L +EAKCR++DPVYG VGII  L+ Q+   + +LAKT+AE
Subjt:  RCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAE

Query:  IAPIQ
        IA  Q
Subjt:  IAPIQ

AT5G66870.1 ASYMMETRIC LEAVES 2-like 11.4e-2948.21Show/hide
Query:  SGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTR
        S  CAACK++RRKC  +C+F+P+FP + PQ+F+ VH+++GASNVAK L+++  + R +A  +LFYEA+ R+ DPVYG VG+IS LQH+L      L   +
Subjt:  SGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTR

Query:  AEIAPIQGPNCV
         E+A   GP  +
Subjt:  AEIAPIQGPNCV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCTGGTCGTTGTGCAGCTTGTAAATATGTGAGAAGAAAATGCCGATCTGATTGCATTTTTTCCCCTTTCTTTCCTTCTAATAACCCTCAAAGATTTTCC
ATTGTTCATCAAATCTATGGTGCCAGCAATGTTGCTAAATTTCTTCATCAAATTCCTGTCCATTTACGAGCTGAAGCAGCAGAAACATTATTTTATGAAGCGAAA
TGCAGAATTGAAGATCCAGTTTATGGAATTGTTGGGATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGAGCTGAGATT
GCTCCCATTCAAGGCCCAAATTGTGTTGGGCTTTCTGCTCCAGCCCATTTGTTTAATTCAAGCTTTTCTAAATTTCTAAGCACCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCTGGTCGTTGTGCAGCTTGTAAATATGTGAGAAGAAAATGCCGATCTGATTGCATTTTTTCCCCTTTCTTTCCTTCTAATAACCCTCAAAGATTTTCC
ATTGTTCATCAAATCTATGGTGCCAGCAATGTTGCTAAATTTCTTCATCAAATTCCTGTCCATTTACGAGCTGAAGCAGCAGAAACATTATTTTATGAAGCGAAA
TGCAGAATTGAAGATCCAGTTTATGGAATTGTTGGGATTATTTCTCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGAGCTGAGATT
GCTCCCATTCAAGGCCCAAATTGTGTTGGGCTTTCTGCTCCAGCCCATTTGTTTAATTCAAGCTTTTCTAAATTTCTAAGCACCTTCTAA
Protein sequenceShow/hide protein sequence
MISGRCAACKYVRRKCRSDCIFSPFFPSNNPQRFSIVHQIYGASNVAKFLHQIPVHLRAEAAETLFYEAKCRIEDPVYGIVGIISQLQHQLHVAETQLAKTRAEI
APIQGPNCVGLSAPAHLFNSSFSKFLSTF