CuGenDBv2

Gene ID	Sed0001715
Organism	Sechium edule (Chayote v1)
Description	Exonuclease domain-containing protein
Genome location	LG01:62897161..62906074
RNA-Seq Expression	Sed0001715
Synteny	Sed0001715
Gene Ontology terms	GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process) GO:0005739 - mitochondrion (cellular component) GO:0000175 - 3'-5'-exoribonuclease activity (molecular function) GO:0003676 - nucleic acid binding (molecular function) GO:0004386 - helicase activity (molecular function)
InterPro domains	IPR012337 - Ribonuclease H-like superfamily IPR013520 - Exonuclease, RNase T/DNA polymerase III IPR022894 - Oligoribonuclease IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022957669.1 oligoribonuclease [Cucurbita moschata]

9.9e-116

86.4

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Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN
        M P VNAFSVLELD EDDQV   ST SKD+A++SSSSRTGK+KKEVN+SGD    +RQKQ QPD AAE YKFPLVWIDLEMTGLNVETDRILEIACII+N
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV
        GSLTKLVEGP LVIHQSKECLEKMGEWCQSHH ASGLTKKVLQS ISEREAEKQVIEFVKKHVG+YTLHLAGNS+Y+DFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SSVK+LCFRWFPR+ +KAPPKENKHRA+DDIRESIMELKYYKENIFK  K
Subjt:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

XP_022996309.1 oligoribonuclease [Cucurbita maxima]

8.4e-115

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Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN
        M P VNAFSVLELD EDDQV   ST SKD+ ++SSSSRTGK+KKEVN+SGD    ERQKQ QPDVAAE YKFPLVWIDLEMTGLNVETDRILEIACII+N
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV
        GSLTKLVEGP LVIHQSKECLEKMGEWCQSHH ASGLTKKVLQS ISEREAEKQVI+FVKKHVG+YTLHLAGNS+Y+DF FLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SSVK+LCFRWFPR+ +KAPPKENKHRA+DDIRESIMELKYYKENIFK  K
Subjt:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

XP_023533182.1 oligoribonuclease [Cucurbita pepo subsp. pepo]

1.4e-114

86.8

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Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN
        M P VNAFSVLELD EDDQV   ST SKD+A++SSSSRTGK+KKE N+SGD    ERQKQ QPDVAAE YKFPLVWIDLEMTGLNVETDRILEIACII+N
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV
        GSLTKLVEGP LVIHQSKECLEKMGEWCQSHH ASGLTKKVLQS ISEREAEKQVIEFVKKHVG+YTLHLAGNS+Y+DFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SSVK+LCFRWFPR+ +KAPPKENKHRA+DDIRESIMELKYYKENIFK  K
Subjt:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

XP_038902868.1 oligoribonuclease isoform X1 [Benincasa hispida]

1.8e-117

86.8

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Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN
        M PLVNAFSVLELD EDDQ+ A+ST SKDDA++SS SRTGK+KKEVN+SGD  T E+QKQ QPDVAAE YKFPLVWIDLEMTGL+VETDRILEIACII+N
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV
        GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHH ASGLTKKVLQS ISEREAEKQVIEFVKKHVG+Y LHLAGNS+YMDFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SSVK+LCFRW+PR+ +KAPPKENKHRA+DDIRESIMELKYYK+NIFK+ K
Subjt:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

XP_038902871.1 oligoribonuclease isoform X2 [Benincasa hispida]

5.6e-111

83.13

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Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGDKTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNG
        M PLVNAFSVLELD EDDQ+ A+ST SKDDA++SS SRTG              E+QKQ QPDVAAE YKFPLVWIDLEMTGL+VETDRILEIACII+NG
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGDKTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNG

Query:  SLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVS
        SLTKLVEGPDLVIHQSKECLEKMGEWCQSHH ASGLTKKVLQS ISEREAEKQVIEFVKKHVG+Y LHLAGNS+YMDFIFLKKYMPDLAGLFSHVLVDVS
Subjt:  SLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVS

Query:  SVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SVK+LCFRW+PR+ +KAPPKENKHRA+DDIRESIMELKYYK+NIFK+ K
Subjt:  SVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZ28 Exonuclease domain-containing protein

3.9e-110

82.4

Show/hide

Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN
        M PLVNAFS+LELD EDDQ+ A+ST SKDDA+ S  S TGK KKEVN+SGD  T ERQKQ QP+  AE YKFPLVWIDLEMTGLNVETDRILEIACII+N
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV
        G+LTKLVEGPDLVIHQSKECL+KMGEWCQSHH ASGLTKKVL+S ISEREAEKQVI+FVKKHV    LHLAGNS+YMDFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SS+K+LC RW+PR+ +KAPPKENKHRA+DDIRESIMELKYYKENIFK+ K
Subjt:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

A0A1S3BNX4 oligoribonuclease

7.9e-111

84.27

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Query:  PLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGS
        PLVNAFSVLELD EDDQ+ A+ST SKDDA+ S SS TGK+KKEVN+SGD  T ERQKQ QP+  AE YKFPLVWIDLEMTGLNVETDRILEIACII+NG+
Subjt:  PLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGS

Query:  LTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSS
        LTKLVEGPDLVIHQSKECLEKMGEWCQSHH ASGLTKKV +S ISEREAEKQVIEFVKKHV    LHLAGNS+YMDFIFLKKYMPDLAGLFSHVLVDVSS
Subjt:  LTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSS

Query:  VKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        VK+LC RW+PR+ +KAPPKENKHRA+DDIRESIMELKYYKENIFK+ K
Subjt:  VKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

A0A6J1DKA2 oligoribonuclease isoform X1

8.2e-108

81.2

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Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN
        M  LVNAFSVLELD EDDQ+ A+ST SK DA++SSSS+TGK+KKEV++SGD  T ERQKQ   DVAAE YK PLVWIDLEMTGLNVETDRILEIACI++N
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV
        G+LTKL EGPDLVIHQSKECLEKMGEWCQ+HH ASGLTKKVL+S ISEREAEKQVIEFVKK+VG+YT  LAGNS+Y DFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SSVK+LC RW+P++ +KAP KENKHRA+DDIRESIMELKYYKENIFK  K
Subjt:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

A0A6J1H2M6 oligoribonuclease

4.8e-116

86.4

Show/hide

Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN
        M P VNAFSVLELD EDDQV   ST SKD+A++SSSSRTGK+KKEVN+SGD    +RQKQ QPD AAE YKFPLVWIDLEMTGLNVETDRILEIACII+N
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV
        GSLTKLVEGP LVIHQSKECLEKMGEWCQSHH ASGLTKKVLQS ISEREAEKQVIEFVKKHVG+YTLHLAGNS+Y+DFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SSVK+LCFRWFPR+ +KAPPKENKHRA+DDIRESIMELKYYKENIFK  K
Subjt:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

A0A6J1K8C8 oligoribonuclease

4.1e-115

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Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN
        M P VNAFSVLELD EDDQV   ST SKD+ ++SSSSRTGK+KKEVN+SGD    ERQKQ QPDVAAE YKFPLVWIDLEMTGLNVETDRILEIACII+N
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGD-KTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV
        GSLTKLVEGP LVIHQSKECLEKMGEWCQSHH ASGLTKKVLQS ISEREAEKQVI+FVKKHVG+YTLHLAGNS+Y+DF FLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SSVK+LCFRWFPR+ +KAPPKENKHRA+DDIRESIMELKYYKENIFK  K
Subjt:  SSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

SwissProt top hits

e value

%identity

Alignment

A2VE52 Oligoribonuclease, mitochondrial

1.7e-46

48.37

Show/hide

Query:  AAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGN
        A E     +VW+DLEMTGL++E D+I+E+AC+I++  L  L EGP+L+I Q  E L+ M +WC+ HHG SGLTK V +S ++ ++AE + + FV++    
Subjt:  AAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGN

Query:  YTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSK
            LAGNS++ D  FL KYMP       + ++DVS+VK LC RW+P E+  AP K   HRALDDI ESI EL++Y+ NIFK K
Subjt:  YTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSK

Q5U1X1 Oligoribonuclease, mitochondrial

8.6e-46

47.28

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Query:  AAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGN
        A E     +VW+DLEMTGL++E D+I+E+AC+I++  L  L EGP+L+I Q  E L+ M +WC+ HHG SGLTK V +S ++ ++AE + + FV++    
Subjt:  AAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGN

Query:  YTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSK
            LAGNS++ D  FL K+MP       + ++DVS+VK LC RW+P ++  AP K   HRALDDI ESI EL++Y+ NIFK K
Subjt:  YTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSK

Q9D8S4 Oligoribonuclease, mitochondrial

8.6e-46

47.28

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Query:  AAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGN
        A E     +VW+DLEMTGL++E D+I+E+AC+I++  L  L EGP+L+I Q  E L+ M +WC+ HHG SGLTK V +S ++ ++AE + + FV++    
Subjt:  AAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGN

Query:  YTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSK
            LAGNS++ D  FL K+MP       + ++DVS+VK LC RW+P ++  AP K   HRALDDI ESI EL++Y+ NIFK K
Subjt:  YTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSK

Q9Y3B8 Oligoribonuclease, mitochondrial

1.0e-46

48.91

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Query:  AAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGN
        A E     +VW+DLEMTGL++E D+I+E+AC+I++  L  L EGP+L+I Q  E L+ M +WC+ HHG SGLTK V +S I+ ++AE + + FV++    
Subjt:  AAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGN

Query:  YTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSK
            LAGNS++ D  FL KYMP       + ++DVS+VK LC RW+P E+  AP K   HRALDDI ESI EL++Y+ NIFK K
Subjt:  YTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSSVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSK

Q9ZVE0 Oligoribonuclease

3.8e-78

62.25

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Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGDKTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNG
        M  L NAFSVL               + +DA  +SSS TGK ++ VN S +  +              YK PLVWIDLEMTGLNVE DRILEIACII+NG
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGDKTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNG

Query:  SLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVS
         LT+ VEGPDLV+ Q+K+CL+KM +WCQ+HHGASGLTKKVL S I+EREAE++VIEFVKKHVG+    LAGNS+Y+DF+FLKKYMP+LA LF H+LVDVS
Subjt:  SLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVS

Query:  SVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SVK+LC RWFP E RKAP K+N HRA+DDIRESI ELKYYK+ IFK+++
Subjt:  SVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

Arabidopsis top hits

e value

%identity

Alignment

AT2G26970.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein

2.7e-79

62.25

Show/hide

Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGDKTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNG
        M  L NAFSVL               + +DA  +SSS TGK ++ VN S +  +              YK PLVWIDLEMTGLNVE DRILEIACII+NG
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGDKTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNG

Query:  SLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVS
         LT+ VEGPDLV+ Q+K+CL+KM +WCQ+HHGASGLTKKVL S I+EREAE++VIEFVKKHVG+    LAGNS+Y+DF+FLKKYMP+LA LF H+LVDVS
Subjt:  SLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVS

Query:  SVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SVK+LC RWFP E RKAP K+N HRA+DDIRESI ELKYYK+ IFK+++
Subjt:  SVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

AT2G26970.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein

1.3e-76

61.45

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Query:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGDKTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNG
        M  L NAFSVL               + +DA  +SSS T    + VN S +  +              YK PLVWIDLEMTGLNVE DRILEIACII+NG
Subjt:  MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGDKTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNG

Query:  SLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVS
         LT+ VEGPDLV+ Q+K+CL+KM +WCQ+HHGASGLTKKVL S I+EREAE++VIEFVKKHVG+    LAGNS+Y+DF+FLKKYMP+LA LF H+LVDVS
Subjt:  SLTKLVEGPDLVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVS

Query:  SVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK
        SVK+LC RWFP E RKAP K+N HRA+DDIRESI ELKYYK+ IFK+++
Subjt:  SVKSLCFRWFPREHRKAPPKENKHRALDDIRESIMELKYYKENIFKSKK

Sequences

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CDS sequence

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ATGATGCCACTCGTAAATGCATTCTCAGTTCTGGAGCTCGATGTTGAAGACGATCAAGTTCACGCTATTTCCACTCTCTCCAAAGACGACGCTTCCTCATCTTCCTCTTC
AAGAACAGGAAAAAACAAGAAGGAAGTTAATGTCTCGGGTGATAAGACGGAAGAAAGACAGAAACAAGACCAACCAGATGTAGCTGCAGAAGGTTACAAATTTCCTCTTG
TTTGGATTGACCTCGAAATGACGGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCGTGTATAATTTCCAATGGAAGTCTGACCAAATTGGTTGAGGGACCTGAC
TTAGTGATTCACCAGTCAAAAGAATGTCTAGAAAAAATGGGAGAATGGTGTCAAAGTCATCATGGAGCCAGTGGATTGACAAAAAAAGTGCTACAAAGTAAAATTAGCGA
ACGAGAAGCTGAGAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGCAACTATACTCTACATTTGGCTGGAAATTCAATTTATATGGATTTTATTTTCTTGAAGAAAT
ACATGCCAGATTTGGCTGGACTGTTTTCACATGTACTTGTGGACGTCAGTAGTGTTAAAAGTCTATGCTTTCGCTGGTTTCCAAGAGAACACAGGAAAGCCCCGCCGAAA
GAGAATAAACATAGGGCTCTGGATGATATCAGAGAAAGCATAATGGAACTTAAATATTATAAGGAAAATATTTTCAAGTCTAAGAAGTGA

mRNA sequence

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ATTAAAACTCAATTTAAACAACGTTAAGCAGAAGCACAAAAGAGGAGACGAAGGCGGGGAAGTTGACCCATTTGAGCGATTGTGGAGCTTGATTTGGGGAGAGAAAGAGC
GCAATGATGCCACTCGTAAATGCATTCTCAGTTCTGGAGCTCGATGTTGAAGACGATCAAGTTCACGCTATTTCCACTCTCTCCAAAGACGACGCTTCCTCATCTTCCTC
TTCAAGAACAGGAAAAAACAAGAAGGAAGTTAATGTCTCGGGTGATAAGACGGAAGAAAGACAGAAACAAGACCAACCAGATGTAGCTGCAGAAGGTTACAAATTTCCTC
TTGTTTGGATTGACCTCGAAATGACGGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCGTGTATAATTTCCAATGGAAGTCTGACCAAATTGGTTGAGGGACCT
GACTTAGTGATTCACCAGTCAAAAGAATGTCTAGAAAAAATGGGAGAATGGTGTCAAAGTCATCATGGAGCCAGTGGATTGACAAAAAAAGTGCTACAAAGTAAAATTAG
CGAACGAGAAGCTGAGAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGCAACTATACTCTACATTTGGCTGGAAATTCAATTTATATGGATTTTATTTTCTTGAAGA
AATACATGCCAGATTTGGCTGGACTGTTTTCACATGTACTTGTGGACGTCAGTAGTGTTAAAAGTCTATGCTTTCGCTGGTTTCCAAGAGAACACAGGAAAGCCCCGCCG
AAAGAGAATAAACATAGGGCTCTGGATGATATCAGAGAAAGCATAATGGAACTTAAATATTATAAGGAAAATATTTTCAAGTCTAAGAAGTGATGCAGGAAGTGACACCA
CAACCACAAGGTTGCATGTCTTAAAATTGTAATCTATTTATTCAATTGTGGTGTATATACTGTGGTATCTTTGGTTCTAATGGATAGTCAAGTGTGGTGCTAGTATAGAC
CTTGTACATCTTAGAGGTGTCATTCCCATCTCTTCCTTTTGTAAATTTAACTTGCAACTCAGACCTCGAGTATCCAACCCAAATCGTGAGAGCTGGG

Protein sequence

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MMPLVNAFSVLELDVEDDQVHAISTLSKDDASSSSSSRTGKNKKEVNVSGDKTEERQKQDQPDVAAEGYKFPLVWIDLEMTGLNVETDRILEIACIISNGSLTKLVEGPD
LVIHQSKECLEKMGEWCQSHHGASGLTKKVLQSKISEREAEKQVIEFVKKHVGNYTLHLAGNSIYMDFIFLKKYMPDLAGLFSHVLVDVSSVKSLCFRWFPREHRKAPPK
ENKHRALDDIRESIMELKYYKENIFKSKK

Sed0001715 (gene) of Chayote v1 genome