; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001729 (gene) of Chayote v1 genome

Gene IDSed0001729
OrganismSechium edule (Chayote v1)
DescriptionLipoxygenase
Genome locationLG11:3143653..3145094
RNA-Seq ExpressionSed0001729
SyntenySed0001729
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR013819 - Lipoxygenase, C-terminal
IPR020833 - Lipoxygenase, iron binding site
IPR020834 - Lipoxygenase, conserved site
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579062.1 putative linoleate 9S-lipoxygenase 4, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4978.69Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        ++PH  K GE LWQLAKAYV VN++GHHQL SHWLNTHAVIEPFVIAT+RQLSVLHPIHKLL+PHFRYT+KINSLARA LINA+GI+EKTQ+PSK+SMEM
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQTWNFNHQALPIDLINR
        S  AY++WNF  QALP DLI R
Subjt:  SSMAYQTWNFNHQALPIDLINR

KAG6599240.1 putative linoleate 9S-lipoxygenase 4, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4978.69Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        ++PH  K GE LWQLAKAYV VN++GHHQL SHWLNTHAVIEPFVIAT+RQLSVLHPIHKLL+PHFRYT+KINSLARA LINA+GI+EKTQ+PSK+SMEM
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQTWNFNHQALPIDLINR
        S  AY++WNF  QALP DLI R
Subjt:  SSMAYQTWNFNHQALPIDLINR

XP_022150826.1 linoleate 9S-lipoxygenase 6-like [Momordica charantia]2.7e-4575.41Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        ++P  Q   E LWQLAKAYV VN++GHHQL SHWLNTHAVIEPFVIAT+RQLSV+HPIHKLLIPHFRYT+ IN+LAR  LINA+GI+EKTQ+PSK+SMEM
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQTWNFNHQALPIDLINR
        SS AYQ W F  QALP DLI R
Subjt:  SSMAYQTWNFNHQALPIDLINR

XP_022946253.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita moschata]2.8e-5078.69Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        ++PH  K GE LWQLAKAYV VN++GHHQL SHWLNTHAVIEPFVIAT+RQLSVLHPIHKLL+PHFRYT+KINSLARA LINA+G++EKTQ+PSK+SMEM
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQTWNFNHQALPIDLINR
        SS AY++WNF  QALP DLI R
Subjt:  SSMAYQTWNFNHQALPIDLINR

XP_023545376.1 linoleate 9S-lipoxygenase 6-like [Cucurbita pepo subsp. pepo]3.3e-5178.86Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        ++PH  K GE LWQLAKAYV VN++GHHQL SHWLNTHAVIEPFVIAT+RQLSVLHPIHKLL+PHFRYT+KINSLARA LINADG++EKTQ+PSK+SMEM
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQTWNFNHQALPIDLINRI
        SS AY++WNF  QALP DLI R+
Subjt:  SSMAYQTWNFNHQALPIDLINRI

TrEMBL top hitse value%identityAlignment
A0A5A7TXS8 Lipoxygenase1.4e-4269.67Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        ++P  +     LWQLAKAYV +N+ GHHQL SHWLNTHAVIEPFVIAT+RQLSVLHPIHKLLIPHF+ T+KIN++AR +LIN DGIIE+T +P+K+SMEM
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQTWNFNHQALPIDLINR
        SS AY+ W F  QALP DLI R
Subjt:  SSMAYQTWNFNHQALPIDLINR

A0A5D3CPU3 Lipoxygenase2.3e-4269.67Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        ++P  +     LWQLAKAYV +N+ GHHQL SHWLNTHAVIEPFVIAT RQLSVLHPIHKLLIPHF+ T+KIN++AR +LIN DGIIE+T +P+K+SMEM
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQTWNFNHQALPIDLINR
        SS AY+ W F  QALP DLI R
Subjt:  SSMAYQTWNFNHQALPIDLINR

A0A6J1D9G9 Lipoxygenase5.7e-4173.87Show/hide
Query:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN
        +WQLAKAYV VN+ G+HQL SHWLNTHAVIEPFVIAT+RQLSV+HPIHKLL+PHFR T+ IN+LAR +LINADGIIE T +P+K+SMEMSS  Y+ W F 
Subjt:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN

Query:  HQALPIDLINR
         QALP DLI R
Subjt:  HQALPIDLINR

A0A6J1DCP2 Lipoxygenase1.3e-4575.41Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        ++P  Q   E LWQLAKAYV VN++GHHQL SHWLNTHAVIEPFVIAT+RQLSV+HPIHKLLIPHFRYT+ IN+LAR  LINA+GI+EKTQ+PSK+SMEM
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQTWNFNHQALPIDLINR
        SS AYQ W F  QALP DLI R
Subjt:  SSMAYQTWNFNHQALPIDLINR

A0A6J1G3A1 Lipoxygenase1.4e-5078.69Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        ++PH  K GE LWQLAKAYV VN++GHHQL SHWLNTHAVIEPFVIAT+RQLSVLHPIHKLL+PHFRYT+KINSLARA LINA+G++EKTQ+PSK+SMEM
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQTWNFNHQALPIDLINR
        SS AY++WNF  QALP DLI R
Subjt:  SSMAYQTWNFNHQALPIDLINR

SwissProt top hitse value%identityAlignment
P38415 Linoleate 9S-lipoxygenase A1.4e-4172.07Show/hide
Query:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN
        +WQLAKAYV VN++G HQL SHWLNTHAVIEPFVIAT+RQLSVLHPIHKLL PHFR T+ IN+LAR  LINA G++E T FPSKF+MEMS++ Y+ W F 
Subjt:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN

Query:  HQALPIDLINR
         QALP DL+ R
Subjt:  HQALPIDLINR

Q41238 Linoleate 9S-lipoxygenase 6 (Fragment)2.5e-4171.17Show/hide
Query:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN
        +WQLAKAYV VN++G HQL SHWLNTHAVIEPFVIAT+RQLSVLHPIHKLL PHFR T+ IN++AR  LINA G++E T FPSKF+MEMS++ Y+ W F 
Subjt:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN

Query:  HQALPIDLINR
         QALP DL+ R
Subjt:  HQALPIDLINR

Q43190 Probable linoleate 9S-lipoxygenase 42.5e-4171.17Show/hide
Query:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN
        +WQLAKAYV VN++G HQL SHWLNTHAVIEPFVIAT+RQLSVLHPIHKLL PHFR T+ IN++AR  LINA G++E T FPSKF+MEMS++ Y+ W F 
Subjt:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN

Query:  HQALPIDLINR
         QALP DL+ R
Subjt:  HQALPIDLINR

Q43191 Probable linoleate 9S-lipoxygenase 51.6e-4070.27Show/hide
Query:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN
        +WQLAKAYV VN++G HQL SHWLNTHA IEPFVIAT+RQLSVLHPIHKLL PHFR T+ IN+LAR  LINA G++E T FP+K++MEMS++ Y++W F 
Subjt:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN

Query:  HQALPIDLINR
         QALP DLI R
Subjt:  HQALPIDLINR

Q53RB0 Probable linoleate 9S-lipoxygenase 42.5e-4168.47Show/hide
Query:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN
        +WQLAKAY  VN++  HQL SHWLNTHAVIEPFVIAT+RQLSV+HP+HKLL PH+R T+ IN+LAR  LINADGI EKT FP K+++EMSS+ Y+ W F 
Subjt:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN

Query:  HQALPIDLINR
         QALP+DL+ R
Subjt:  HQALPIDLINR

Arabidopsis top hitse value%identityAlignment
AT1G17420.1 lipoxygenase 32.3e-3455.28Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        + P V      +WQLAKA+V  N+AG HQL +HWL THA +EPF++A HRQLS +HPI KLL PH RYTL+IN+LAR +LI+ADG+IE       + MEM
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQ-TWNFNHQALPIDLINR
        S+ AY+ +W F+ + LP DLI R
Subjt:  SSMAYQ-TWNFNHQALPIDLINR

AT1G55020.1 lipoxygenase 14.9e-3762.7Show/hide
Query:  VPHVQKPGE----LLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFS
        V  V  PGE     LWQLAKA+V VN++G+HQL SHW+ THA IEPFVIAT+RQLSVLHP+ KLL PHFR T+ IN+LAR  LIN  GI E T FPSK++
Subjt:  VPHVQKPGE----LLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFS

Query:  MEMSSMAYQT-WNFNHQALPIDLINR
        MEMSS  Y+  W F  QALP +L  R
Subjt:  MEMSSMAYQT-WNFNHQALPIDLINR

AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein1.5e-3357.14Show/hide
Query:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQT-WNF
        +W+LAKA+V  N+AG HQL +HWL THA +EP++IAT+RQLS +HP++KLL PH RYTL+IN+ AR +LIN  GIIE    P K++ME+SS AY++ W F
Subjt:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQT-WNF

Query:  NHQALPIDLINR
        + + LP DL+ R
Subjt:  NHQALPIDLINR

AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein1.5e-3353.66Show/hide
Query:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM
        + P V      +WQLAKA+V  N+AG HQL +HWL THA +EPF++A HRQLS +HPI KLL PH RYTL+IN++AR  LI+ADG+IE      ++ +E+
Subjt:  MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEM

Query:  SSMAYQT-WNFNHQALPIDLINR
        SS AY+  W F+ + LP DLI R
Subjt:  SSMAYQT-WNFNHQALPIDLINR

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein5.6e-4166.67Show/hide
Query:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN
        +WQLAKAY  VN++G+HQL SHWL THAVIEPF+IA++RQLSV+HPIHKLL PHFR T+ IN+LAR  LIN+DG++E+T FPS+++MEMSS  Y+ W F 
Subjt:  LWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNFN

Query:  HQALPIDLINR
         QALP DL+ R
Subjt:  HQALPIDLINR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCCCCATGTTCAAAAACCTGGTGAATTACTTTGGCAATTGGCTAAAGCTTATGTTCTTGTCAACGAGGCTGGGCACCACCAACTTTGCAGCCATTGGCTGAACAC
ACATGCAGTAATTGAGCCATTTGTGATTGCAACACATAGACAATTGAGTGTTCTTCATCCAATTCACAAACTGCTTATTCCCCATTTTCGATACACTTTGAAGATCAACT
CTCTTGCAAGGGCAGCCCTCATTAATGCTGATGGCATCATTGAGAAAACTCAATTTCCATCCAAGTTCTCAATGGAGATGTCTTCTATGGCTTACCAAACTTGGAACTTC
AATCACCAAGCACTCCCTATTGATCTAATTAACAGAATTTGGGGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCCCCATGTTCAAAAACCTGGTGAATTACTTTGGCAATTGGCTAAAGCTTATGTTCTTGTCAACGAGGCTGGGCACCACCAACTTTGCAGCCATTGGCTGAACAC
ACATGCAGTAATTGAGCCATTTGTGATTGCAACACATAGACAATTGAGTGTTCTTCATCCAATTCACAAACTGCTTATTCCCCATTTTCGATACACTTTGAAGATCAACT
CTCTTGCAAGGGCAGCCCTCATTAATGCTGATGGCATCATTGAGAAAACTCAATTTCCATCCAAGTTCTCAATGGAGATGTCTTCTATGGCTTACCAAACTTGGAACTTC
AATCACCAAGCACTCCCTATTGATCTAATTAACAGAATTTGGGGTAGTTGA
Protein sequenceShow/hide protein sequence
MVPHVQKPGELLWQLAKAYVLVNEAGHHQLCSHWLNTHAVIEPFVIATHRQLSVLHPIHKLLIPHFRYTLKINSLARAALINADGIIEKTQFPSKFSMEMSSMAYQTWNF
NHQALPIDLINRIWGS