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Sed0001742 (gene) of Chayote v1 genome

Gene IDSed0001742
OrganismSechium edule (Chayote v1)
DescriptionChlororespiratory reduction 42
Genome locationLG01:12661725..12665956
RNA-Seq ExpressionSed0001742
SyntenySed0001742
Gene Ontology termsNA
InterPro domainsIPR021495 - Protein of unknown function DUF3148


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449832.1 PREDICTED: uncharacterized protein LOC103491596 [Cucumis melo]2.9e-2761.48Show/hide
Query:  FSLATAIPRPSISLINSI-PFSTSNNLT-------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM
        FS  T I RPSI  + SI  F+ SNNL+                    +TPPA  ++LEIGSPVI++EAPKMIKTAASVPCLRVN GI+N   GDVGRI+
Subjt:  FSLATAIPRPSISLINSI-PFSTSNNLT-------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM

Query:  SRKPKDVWVVRLKVGTYLIDGR
        SRKPKDVW VRLKVGTYLIDGR
Subjt:  SRKPKDVWVVRLKVGTYLIDGR

XP_022153826.1 uncharacterized protein LOC111021250 [Momordica charantia]4.3e-3168.6Show/hide
Query:  SLATAIPRPSISLINSI-PFSTSNNLT-------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIMS
        S ATAIPRPSIS+INSI  F+ SN L+                   DETPPA  R+LEIGSPVI+VEAPKMIKTAASVPCLRVN GI+N   GDVGRI+S
Subjt:  SLATAIPRPSISLINSI-PFSTSNNLT-------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIMS

Query:  RKPKDVWVVRLKVGTYLIDGR
        RKPKDVW VRLKVGTYLIDGR
Subjt:  RKPKDVWVVRLKVGTYLIDGR

XP_022985824.1 uncharacterized protein LOC111483753 [Cucurbita maxima]1.5e-2865.57Show/hide
Query:  SLATAIPRPS--ISLINSI-PFSTSNNLT------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM
        S ATAIPRPS  I ++NSI  F+ SN+L+                  D TPPA  R+LEIGSPVI+VEAPKMIKTAASVPCLRVN GI+N   GDVGRI+
Subjt:  SLATAIPRPS--ISLINSI-PFSTSNNLT------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM

Query:  SRKPKDVWVVRLKVGTYLIDGR
        SRKPKDVW VRLKVGTYLIDGR
Subjt:  SRKPKDVWVVRLKVGTYLIDGR

XP_023513105.1 uncharacterized protein LOC111777646 [Cucurbita pepo subsp. pepo]4.5e-2864.75Show/hide
Query:  SLATAIPRPS--ISLINSI-PFSTSNNLT------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM
        S ATAIPRPS  I +++SI  F+ SN+L+                  D TPPA  R+LEIGSPVI+VEAPKMIKTAASVPCLRVN GI+N   GDVGRI+
Subjt:  SLATAIPRPS--ISLINSI-PFSTSNNLT------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM

Query:  SRKPKDVWVVRLKVGTYLIDGR
        SRKPKDVW VRLKVGTYLIDGR
Subjt:  SRKPKDVWVVRLKVGTYLIDGR

XP_038900819.1 uncharacterized protein LOC120087887 [Benincasa hispida]1.3e-2760.83Show/hide
Query:  SLATAIPRPSISLINSI-------------------PFSTSNNLTDETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIMSR
        S ATAI RPSI++++SI                      +S +  D+TPP N R+LEIGSPVI++EAPKMIKTAASVPCLRVN GI+N   GDVGRI+SR
Subjt:  SLATAIPRPSISLINSI-------------------PFSTSNNLTDETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIMSR

Query:  KPKDVWVVRLKVGTYLIDGR
        KPKDVW VRLKVGTYLIDG+
Subjt:  KPKDVWVVRLKVGTYLIDGR

TrEMBL top hitse value%identityAlignment
A0A1S3BMX2 uncharacterized protein LOC1034915961.4e-2761.48Show/hide
Query:  FSLATAIPRPSISLINSI-PFSTSNNLT-------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM
        FS  T I RPSI  + SI  F+ SNNL+                    +TPPA  ++LEIGSPVI++EAPKMIKTAASVPCLRVN GI+N   GDVGRI+
Subjt:  FSLATAIPRPSISLINSI-PFSTSNNLT-------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM

Query:  SRKPKDVWVVRLKVGTYLIDGR
        SRKPKDVW VRLKVGTYLIDGR
Subjt:  SRKPKDVWVVRLKVGTYLIDGR

A0A5A7T9E1 Chlororespiratory reduction 421.4e-2761.48Show/hide
Query:  FSLATAIPRPSISLINSI-PFSTSNNLT-------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM
        FS  T I RPSI  + SI  F+ SNNL+                    +TPPA  ++LEIGSPVI++EAPKMIKTAASVPCLRVN GI+N   GDVGRI+
Subjt:  FSLATAIPRPSISLINSI-PFSTSNNLT-------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM

Query:  SRKPKDVWVVRLKVGTYLIDGR
        SRKPKDVW VRLKVGTYLIDGR
Subjt:  SRKPKDVWVVRLKVGTYLIDGR

A0A6J1DLV6 uncharacterized protein LOC1110212502.1e-3168.6Show/hide
Query:  SLATAIPRPSISLINSI-PFSTSNNLT-------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIMS
        S ATAIPRPSIS+INSI  F+ SN L+                   DETPPA  R+LEIGSPVI+VEAPKMIKTAASVPCLRVN GI+N   GDVGRI+S
Subjt:  SLATAIPRPSISLINSI-PFSTSNNLT-------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIMS

Query:  RKPKDVWVVRLKVGTYLIDGR
        RKPKDVW VRLKVGTYLIDGR
Subjt:  RKPKDVWVVRLKVGTYLIDGR

A0A6J1FYJ7 uncharacterized protein LOC1114487511.8e-2763.93Show/hide
Query:  SLATAIPRPS--ISLINSI-PFSTSNNLT------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM
        S ATAIPRPS  I +++SI  F+ SN+L+                  D TPPA   +LEIGSPVI+VEAPKMIKTAASVPCLRVN GI+N   GDVGRI+
Subjt:  SLATAIPRPS--ISLINSI-PFSTSNNLT------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM

Query:  SRKPKDVWVVRLKVGTYLIDGR
        SRKPKDVW VRLKVGTYLIDGR
Subjt:  SRKPKDVWVVRLKVGTYLIDGR

A0A6J1JEC4 uncharacterized protein LOC1114837537.4e-2965.57Show/hide
Query:  SLATAIPRPS--ISLINSI-PFSTSNNLT------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM
        S ATAIPRPS  I ++NSI  F+ SN+L+                  D TPPA  R+LEIGSPVI+VEAPKMIKTAASVPCLRVN GI+N   GDVGRI+
Subjt:  SLATAIPRPS--ISLINSI-PFSTSNNLT------------------DETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIM

Query:  SRKPKDVWVVRLKVGTYLIDGR
        SRKPKDVW VRLKVGTYLIDGR
Subjt:  SRKPKDVWVVRLKVGTYLIDGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G20935.1 unknown protein5.1e-2266.2Show/hide
Query:  ELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIMSRKPKDVWVVRLKVGTYLIDGRLRKKI
        +L++GSP+IIVEAPK+IKTAAS+PCLR N G+V    GDVGRI+SRKPKD+W VRL +GTYL+DG+  K +
Subjt:  ELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIMSRKPKDVWVVRLKVGTYLIDGRLRKKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTTTCACTCGCCACAGCAATTCCACGCCCAAGCATCAGCCTCATCAATTCAATCCCCTTCAGCACCTCGAACAACTTAACCGACGAGACACCGCCCGCGAATAT
TCGAGAGCTCGAGATCGGCTCCCCTGTAATCATAGTTGAAGCTCCGAAGATGATAAAGACGGCGGCCTCGGTTCCATGCCTCAGGGTCAATTTTGGCATAGTCAACATGC
CTCAGGGCGACGTCGGCAGAATCATGTCGAGAAAACCGAAGGACGTGTGGGTTGTGCGGCTTAAGGTCGGGACTTATCTCATCGATGGGAGGTTGAGAAAAAAAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTTTCACTCGCCACAGCAATTCCACGCCCAAGCATCAGCCTCATCAATTCAATCCCCTTCAGCACCTCGAACAACTTAACCGACGAGACACCGCCCGCGAATAT
TCGAGAGCTCGAGATCGGCTCCCCTGTAATCATAGTTGAAGCTCCGAAGATGATAAAGACGGCGGCCTCGGTTCCATGCCTCAGGGTCAATTTTGGCATAGTCAACATGC
CTCAGGGCGACGTCGGCAGAATCATGTCGAGAAAACCGAAGGACGTGTGGGTTGTGCGGCTTAAGGTCGGGACTTATCTCATCGATGGGAGGTTGAGAAAAAAAATTTAA
ATGGAAAGCTGAAGGCAATTATTGCTTACTTTAGCAATGGTTCTATGAACAAACCCAATGTCATGTAATGCTTGATATCAATTCTCTTTTTTTGAAGTTTTCCAACAATT
GTGATGGATAGAATGTACAAAAATAAACAGGTGCTTAAATTATTGTCTTGACTTAAACAATTTGGCGAACATGGAGAAGAAGAACAGTTCATTGTACGATAAACTCAGCT
CTTATAATTGCAACCAAAGTTGTGCAAGCAGGTGTTGATGGAATCATTGTCTCCAATCATAGAGCCCGTCAACTAGGCTTTGCTCCTGCCACTATTTTTGTCCTTGAAAA
GATATGTTTAGTTTCATTTTATACTAGTCAAATACATGGAGATAAAATTACTAAAGTTTTTGCATAAATTAATTTCACATTACTTCAATTCCACCTTATTTGTTTTTCAC
TTTTAACCTTTCTAATATTGCATTTCTTCTAGAATAGATTTTTTTTTTTTTGAAATAAGGGTAACCACACCCGTTTCTAGGCTAGGCACTGGGAGACATCGAAGGAATGA
AGACACGGGAGGTAATTTTCTTTTGATAGTTTTTTTTGATAGTATGAACACATTTTGTTGATTTGCTTGATTCTCCTATCACTTATTCATAATCCCACTTAGGAATGACT
TCTATTGAGTTTTATTGAAAGATATTAAGCTACCTAATAATCGTTTTAACATTTTGTTTCACCCATTAATGAACTTGATTATTGTATTTGCAACAAGTTTAGGTTTTGGT
ACAAATGAGTCATTTCTATTTGATGAGGCATTGTTATTCAATATGAAGTTATATATATGTATATGTATATACCAAAGGTATGACTTCAAGACTAGATACATGATAAATTT
ATCATTGTTAGTGTTTTTATGTTAGGTAAGAACTTTTTTTTTAATATTTGTTTTCTTGTAGGTGTGCCCCTCTGGTATTTGAGAGATTGCTAGGTTATTTGATGGTGATT
TTTATTTTATTTGTGGTTCATACATATTCAGAAATTTATTCCTTGCATCTATTTTCTTTTGTTATTTTATTTTGATTCAAACAACTGATTTCCATTATTTTTCTCCAAGA
GAAACAATAAATTGATGTTAGCAATATTTCCTCTCATAACTATTCTACTTAGGCTCTAATTATAATTAGCATGAAAGTGTTCCTTGATCAACTTAGTGAAATTACTATAG
GTCAACCTAGTGAAATTATTATAGGATGAACCATCTCTATTGCTTGTTTGTTTCAACTTTTGAAACTTTTTTGTGTCTTAGTTTGCTGGTGTTATGGCAAAAGATAACTT
CAATGGAGTTTGACCATATATCGAAAGAACAATAGAGTTCTTTTTATTTATTTTATTTTTTTATATGAAAGTCTCTTGTGGGTCCTAGAAGAATGATGTTTTTTGGGAAC
AATTAACACTTGCAGCATTGTATCAAATAAATCTAATTTTTTACTTCTAAAATAATGTACCACTCACATTTTTTATGCATTTCGAATAGTGTTTATGTGTTTATCCTATA
GTTATGGTAGCCTGGAATGAAAATTGAGGTAATCCTTAGAAGTTTGTAATTTTTATTTTGTAGGTACTTTGTTCAAGGTAATGATCGTTTGCATGAACAATCATCGCCCA
AGTTGTCAGTTATTGTACGAGTTGCCAAAGTATTCCATTCTAG
Protein sequenceShow/hide protein sequence
MCFSLATAIPRPSISLINSIPFSTSNNLTDETPPANIRELEIGSPVIIVEAPKMIKTAASVPCLRVNFGIVNMPQGDVGRIMSRKPKDVWVVRLKVGTYLIDGRLRKKI