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Sed0001788 (gene) of Chayote v1 genome

Gene IDSed0001788
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG01:15866719..15869696
RNA-Seq ExpressionSed0001788
SyntenySed0001788
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146608.1 uncharacterized protein LOC101210942 [Cucumis sativus]1.1e-4288.29Show/hide
Query:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV
        MA NDSGDGEVSSAQAVLLGALAPGVNGPTW  LKS FLMLGLCL+LML LAFSSSDSWLILHVTFLVVIT TLFLLLNWFLS+TGLVSVKNQMEELQL 
Subjt:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV

Query:  PKSQDNIVKND
        PKSQD   KN+
Subjt:  PKSQDNIVKND
XP_008442704.1 PREDICTED: uncharacterized protein LOC103486495 [Cucumis melo]7.2e-4287.39Show/hide
Query:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV
        MA NDSGDGEVSSAQAVLLGALAPGVNGPTW  LKS FLMLGLCL+LML LAFSSSDSWLILHVTFLVVIT TLFLLLNWFLS+TGLVSVKNQMEELQL 
Subjt:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV

Query:  PKSQDNIVKND
        PKS+D   KN+
Subjt:  PKSQDNIVKND
XP_022954415.1 uncharacterized protein LOC111456676 [Cucurbita moschata]2.5e-4287.39Show/hide
Query:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV
        MAG+DSGDGEVSSAQAVLLGALAPGVNGPTW  LKS FLMLGLCL+LML LAFS+SDSWLILHVTFLVVIT TLFLLLNWFLSETGLVSVKNQMEELQ+ 
Subjt:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV

Query:  PKSQDNIVKND
        PKSQD   KN+
Subjt:  PKSQDNIVKND
XP_022994498.1 uncharacterized protein LOC111490203 [Cucurbita maxima]7.2e-4286.49Show/hide
Query:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV
        MAG+DSGDGEVSSAQAVLLGALAPGVNGPTW  LKS FLMLGLCL+LML LAFS+SDSWLILHVTFLVVIT TLFLLLNWFLSETGLVSVKNQMEELQ+ 
Subjt:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV

Query:  PKSQDNIVKND
        PKS+D   KN+
Subjt:  PKSQDNIVKND
XP_038876938.1 uncharacterized protein LOC120069298 [Benincasa hispida]6.5e-4388.29Show/hide
Query:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV
        MA N+SGDGEVSSAQAVLLGALAPGVNGPTW  LKSTFLMLGLCL+LMLGLAFSSSDSWLILHVTFLV ITVTLFLLLNWFLS+TGLVSVKNQMEEL L 
Subjt:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV

Query:  PKSQDNIVKND
        PKSQD   KN+
Subjt:  PKSQDNIVKND
TrEMBL top hitse value%identityAlignment
A0A0A0LUL6 Uncharacterized protein5.4e-4388.29Show/hide
Query:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV
        MA NDSGDGEVSSAQAVLLGALAPGVNGPTW  LKS FLMLGLCL+LML LAFSSSDSWLILHVTFLVVIT TLFLLLNWFLS+TGLVSVKNQMEELQL 
Subjt:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV

Query:  PKSQDNIVKND
        PKSQD   KN+
Subjt:  PKSQDNIVKND
A0A1R3H4F3 Uncharacterized protein3.0e-3378.43Show/hide
Query:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV
        M    +  GE+SSAQAVLLGALAPGVNGPTWN LKSTFLMLGLCL LMLGLAFSSSDS LILHV FLV+IT+TLFLLLNWFL +TGLVSV++QM+E+ L 
Subjt:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV

Query:  PK
        PK
Subjt:  PK
A0A1S3B5U3 uncharacterized protein LOC1034864953.5e-4287.39Show/hide
Query:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV
        MA NDSGDGEVSSAQAVLLGALAPGVNGPTW  LKS FLMLGLCL+LML LAFSSSDSWLILHVTFLVVIT TLFLLLNWFLS+TGLVSVKNQMEELQL 
Subjt:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV

Query:  PKSQDNIVKND
        PKS+D   KN+
Subjt:  PKSQDNIVKND
A0A6J1GSC6 uncharacterized protein LOC1114566761.2e-4287.39Show/hide
Query:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV
        MAG+DSGDGEVSSAQAVLLGALAPGVNGPTW  LKS FLMLGLCL+LML LAFS+SDSWLILHVTFLVVIT TLFLLLNWFLSETGLVSVKNQMEELQ+ 
Subjt:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV

Query:  PKSQDNIVKND
        PKSQD   KN+
Subjt:  PKSQDNIVKND
A0A6J1K5C1 uncharacterized protein LOC1114902033.5e-4286.49Show/hide
Query:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV
        MAG+DSGDGEVSSAQAVLLGALAPGVNGPTW  LKS FLMLGLCL+LML LAFS+SDSWLILHVTFLVVIT TLFLLLNWFLSETGLVSVKNQMEELQ+ 
Subjt:  MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLV

Query:  PKSQDNIVKND
        PKS+D   KN+
Subjt:  PKSQDNIVKND
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28250.1 unknown protein1.8e-2762.11Show/hide
Query:  EVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLVPKSQ
        ++SS +AV LGALAPGVNGPTWN L+  FL+LGLCL  ML +AF+S  S L++HV FL+VI  TLF+LLNWFL++TGLV V+ QM+EL L+P  +
Subjt:  EVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLVPKSQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGCAACGATTCTGGTGATGGAGAAGTATCTTCAGCACAAGCAGTTTTGCTCGGAGCTTTAGCCCCTGGTGTCAACGGTCCTACATGGAATGCGCTCAAATCAAC
GTTTCTGATGTTGGGTCTTTGTCTTCTCCTGATGCTTGGCCTTGCATTCTCTTCCAGCGATTCTTGGTTGATTCTTCATGTTACCTTCCTTGTGGTTATAACTGTCACTC
TTTTCTTGCTTCTTAACTGGTTTCTTTCTGAGACTGGCTTGGTTTCAGTGAAGAACCAAATGGAAGAGCTTCAGCTGGTGCCAAAGAGTCAAGATAACATCGTAAAGAAC
GATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGCAACGATTCTGGTGATGGAGAAGTATCTTCAGCACAAGCAGTTTTGCTCGGAGCTTTAGCCCCTGGTGTCAACGGTCCTACATGGAATGCGCTCAAATCAAC
GTTTCTGATGTTGGGTCTTTGTCTTCTCCTGATGCTTGGCCTTGCATTCTCTTCCAGCGATTCTTGGTTGATTCTTCATGTTACCTTCCTTGTGGTTATAACTGTCACTC
TTTTCTTGCTTCTTAACTGGTTTCTTTCTGAGACTGGCTTGGTTTCAGTGAAGAACCAAATGGAAGAGCTTCAGCTGGTGCCAAAGAGTCAAGATAACATCGTAAAGAAC
GATTGA
Protein sequenceShow/hide protein sequence
MAGNDSGDGEVSSAQAVLLGALAPGVNGPTWNALKSTFLMLGLCLLLMLGLAFSSSDSWLILHVTFLVVITVTLFLLLNWFLSETGLVSVKNQMEELQLVPKSQDNIVKN
D