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Sed0001808 (gene) of Chayote v1 genome

Gene IDSed0001808
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:12669365..12669908
RNA-Seq ExpressionSed0001808
SyntenySed0001808
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5531823.1 hypothetical protein DKX38_018493 [Salix brachista]3.9e-1256.94Show/hide
Query:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCG
        MAR + E   V+   GV G   +LLWA L TLC++S IIFSC++G+SKD+ S AD  LYGGGC A CGA CG
Subjt:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCG

KAE8652552.1 hypothetical protein Csa_013579 [Cucumis sativus]1.3e-2074.32Show/hide
Query:  MARLIGETGGVNETFGVA-GDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCGA
        MARL+ E    N +FG+A G+ Y L W ALFTLCIIST+IFSCSDGMSKDR+ST DV+LYGGGCAAGCGAGCGA
Subjt:  MARLIGETGGVNETFGVA-GDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCGA

KAG6572949.1 hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1975.36Show/hide
Query:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGA
        MARLIGE G V+ +FG++GDI  L  AALFTLCIIS I FSCSDG+SK+R+STADV+LYGGGCAAGCGA
Subjt:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGA

KAG6584341.1 hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2382.43Show/hide
Query:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMS-KDRDSTADVDLYGGGCAAGCGAGCGA
        MARL+ E G  N +FG+AGDIYLL WAALFTLCIISTIIFSCSDGMS KDR+STADV+LYG GCAAGCGAGCGA
Subjt:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMS-KDRDSTADVDLYGGGCAAGCGAGCGA

XP_015882794.1 uncharacterized protein LOC107418606 [Ziziphus jujuba]1.3e-1260.27Show/hide
Query:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCGA
        M RL  +   V+ + G AG  +++LW AL  +CIIS IIFSC+DG+SK++ STAD +LYGGGCAAGCGAGCGA
Subjt:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCGA

TrEMBL top hitse value%identityAlignment
A0A0A0LQU7 Uncharacterized protein6.5e-2174.32Show/hide
Query:  MARLIGETGGVNETFGVA-GDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCGA
        MARL+ E    N +FG+A G+ Y L W ALFTLCIIST+IFSCSDGMSKDR+ST DV+LYGGGCAAGCGAGCGA
Subjt:  MARLIGETGGVNETFGVA-GDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCGA

A0A2P5FVW4 Uncharacterized protein3.2e-1256.76Show/hide
Query:  MARLIGETGGVNETFGV--AGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCG
        M RL  E  GV+   G   +G   + L   L TLCI+ST+IFSC+DG+SK++ S AD +LYGGGCAAGCGAGCG
Subjt:  MARLIGETGGVNETFGV--AGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCG

A0A5N5KN69 Uncharacterized protein1.9e-1256.94Show/hide
Query:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCG
        MAR + E   V+   GV G   +LLWA L TLC++S IIFSC++G+SKD+ S AD  LYGGGC A CGA CG
Subjt:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCG

A0A6P3ZT85 uncharacterized protein LOC1074186066.5e-1360.27Show/hide
Query:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCGA
        M RL  +   V+ + G AG  +++LW AL  +CIIS IIFSC+DG+SK++ STAD +LYGGGCAAGCGAGCGA
Subjt:  MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCGA

B9I2J4 Uncharacterized protein5.5e-1264.91Show/hide
Query:  GVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCG
        GV G   +LLWA L TLC++S I+FSC++G+SKD+ S AD  LYGGGCAAGCGA CG
Subjt:  GVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68238.1 unknown protein9.0e-0746.3Show/hide
Query:  GDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCG
        G++ L +WAA+    +I+ +IFSCSD  SK   +    D+ G  CAAGCG GCG
Subjt:  GDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCG

AT3G18250.1 Putative membrane lipoprotein2.9e-0542.86Show/hide
Query:  AGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGC-AAGCGAGCG
        A  ++ +++ A+   CI+S ++FSC+DG+S +R +T+     GGGC  AGCG GCG
Subjt:  AGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGC-AAGCGAGCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGACTGATCGGAGAAACTGGCGGCGTTAATGAAACTTTTGGGGTCGCCGGTGACATTTACTTGCTGTTATGGGCGGCTCTGTTCACACTCTGCATAATCTCCAC
TATAATTTTCTCTTGCTCCGATGGCATGTCAAAGGACAGGGATTCCACGGCGGACGTTGACCTCTACGGCGGCGGTTGCGCCGCCGGGTGCGGCGCTGGATGTGGGGCTT
AA
mRNA sequenceShow/hide mRNA sequence
CTCAACTGGGTCTTTTTTCTTTTCAGACCCATAAAAAAAGGTTGCAGAAATGGCGAGACTGATCGGAGAAACTGGCGGCGTTAATGAAACTTTTGGGGTCGCCGGTGACA
TTTACTTGCTGTTATGGGCGGCTCTGTTCACACTCTGCATAATCTCCACTATAATTTTCTCTTGCTCCGATGGCATGTCAAAGGACAGGGATTCCACGGCGGACGTTGAC
CTCTACGGCGGCGGTTGCGCCGCCGGGTGCGGCGCTGGATGTGGGGCTTAAAAAATTTTCACTTTTTATTTTATAGGGGAATTTCTTCACAGGCGACAAAAGCGAGAGCC
TGTTGATTACTGCCATCATTTTTGTTAGAATTGTGATTTATGGTATGTCTCGTAGTGATTATGAAAATAATAAAGGTGTGTTTGGACCCATTTATATAAACGGTCGAGTT
GGTTACCCAACCGATGTTTGCCCCACCGTTTATTATAAACCGCGGTTACCTAAACCTGCATACTCATTTATCTAAACCTTACATAATCAGCCTCTCAAACACAG
Protein sequenceShow/hide protein sequence
MARLIGETGGVNETFGVAGDIYLLLWAALFTLCIISTIIFSCSDGMSKDRDSTADVDLYGGGCAAGCGAGCGA