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Sed0001809 (gene) of Chayote v1 genome

Gene IDSed0001809
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:1512978..1514045
RNA-Seq ExpressionSed0001809
SyntenySed0001809
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]2.3e-0650.68Show/hide
Query:  KVTFFALLFLCFNVSARKLDGTNLVARIARE----TDGVKGRRLIIQDQLDGPWKGHYKSPPPRPPPPPPPRS
        KV F   L +  +VSAR+L G N+V R ARE     +GV G   +I  QLD  W+GHY  PPPR PPPPP  S
Subjt:  KVTFFALLFLCFNVSARKLDGTNLVARIARE----TDGVKGRRLIIQDQLDGPWKGHYKSPPPRPPPPPPPRS
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]3.5e-0758.75Show/hide
Query:  WK-VTFFALLFLCFNVSARKLDGTNLVARIARE--TDGVKGRRLIIQDQLDGPWKGHYKSPPPRPPPPPPPRSPSYCPPP
        WK V FFALL L FNVSAR+L GTN+VAR   E   +   GRRLI + QLD  W G+Y  PPPR PPPPPP    Y P P
Subjt:  WK-VTFFALLFLCFNVSARKLDGTNLVARIARE--TDGVKGRRLIIQDQLDGPWKGHYKSPPPRPPPPPPPRSPSYCPPP
KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-0549.32Show/hide
Query:  KVTFFALLFLCFNVSARKLDGTNLVARIARE----TDGVKGRRLIIQDQLDGPWKGHYKSPPPRPPPPPPPRS
        KV F   L +  +VSAR+L G N+V R ARE     +GV     +I  QLD  W+GHY  PPPR PPPPP  S
Subjt:  KVTFFALLFLCFNVSARKLDGTNLVARIARE----TDGVKGRRLIIQDQLDGPWKGHYKSPPPRPPPPPPPRS
KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-0557.5Show/hide
Query:  WK-VTFFALLFLCFNVSARKLDGTNLVARIARE--TDGVKGRRLIIQDQLDGPWKGHYKSPPPRPPPPPPPRSPSYCPPP
        WK V FFALL L FNVSAR+L GTN+VAR   E   +   GRRLI + QLD  W G+Y  PPPR  PPPPP    Y P P
Subjt:  WK-VTFFALLFLCFNVSARKLDGTNLVARIARE--TDGVKGRRLIIQDQLDGPWKGHYKSPPPRPPPPPPPRSPSYCPPP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTGCAAGAGCTCATGGACTTGATTGGAAGGTGACCTTCTTTGCTTTGCTTTTCCTCTGTTTCAATGTTTCTGCAAGAAAACTTGATGGGACCAACCTGGTGGC
TCGCATAGCTCGCGAGACAGATGGGGTGAAGGGAAGGCGATTAATTATTCAAGATCAGTTGGATGGCCCTTGGAAGGGACACTATAAATCTCCTCCTCCTCGACCTCCTC
CTCCGCCGCCACCTCGTTCACCTTCGTATTGTCCTCCTCCACCTTATTAA
mRNA sequenceShow/hide mRNA sequence
CTCTCTTTGGTTAGTTCTATATATGTAACCAAAATCTCTCTACTTGACACACAACTCTAGCTTTCTTTGAAAAGGTGAGATTATGGCTGCTGCAAGAGCTCATGGACTTG
ATTGGAAGGTGACCTTCTTTGCTTTGCTTTTCCTCTGTTTCAATGTTTCTGCAAGAAAACTTGATGGGACCAACCTGGTGGCTCGCATAGCTCGCGAGACAGATGGGGTG
AAGGGAAGGCGATTAATTATTCAAGATCAGTTGGATGGCCCTTGGAAGGGACACTATAAATCTCCTCCTCCTCGACCTCCTCCTCCGCCGCCACCTCGTTCACCTTCGTA
TTGTCCTCCTCCACCTTATTAAAGGCAATAAGTCTTGAATTTTTGTGTATGTTCTTTAATTATCTATCTGTAGTTGGAGAATAAAGCCAGTATGGTTGAATTTGGATGAA
ATATCCATGAGTAAGTTTATGAACTAAACTTTTTTCCATTGAAAGTTGTGGACTTTAATGTTGTTGCTTTTGTGTTGCAAAATGTTGACTTAGCTTATTCAGGATCATGT
ATTATAGTCCACTTTAATTAGTCTCA
Protein sequenceShow/hide protein sequence
MAAARAHGLDWKVTFFALLFLCFNVSARKLDGTNLVARIARETDGVKGRRLIIQDQLDGPWKGHYKSPPPRPPPPPPPRSPSYCPPPPY