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Sed0001891 (gene) of Chayote v1 genome

Gene IDSed0001891
OrganismSechium edule (Chayote v1)
DescriptionEthylene-responsive transcription factor
Genome locationLG09:34221604..34221999
RNA-Seq ExpressionSed0001891
SyntenySed0001891
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574921.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2454.96Show/hide
Query:  MDDRRRRGAEIGGGER----------SFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESA---SLRNGNG
        MD+  R G + GG  R           FAAEIRDS+R GAR+WLGTF+TAEEAARAYDRAA+ MRG LA LNFP+E+P +  SSSGS S+   S R G+G
Subjt:  MDDRRRRGAEIGGGER----------SFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESA---SLRNGNG

Query:  GEERNEGLVFEFEYLDEKLLEELLDFDEGNK
        G       V E E LD+K+LEELL+++E  K
Subjt:  GEERNEGLVFEFEYLDEKLLEELLDFDEGNK

KAG7013489.1 Ethylene-responsive transcription factor 1B, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-2454.96Show/hide
Query:  MDDRRRRGAEIGGGER----------SFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESA---SLRNGNG
        MD+  R G + GG  R           FAAEIRDS+R GAR+WLGTF+TAEEAARAYDRAA+ MRG LA LNFP+E+P +  SSSGS S+   S R G+G
Subjt:  MDDRRRRGAEIGGGER----------SFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESA---SLRNGNG

Query:  GEERNEGLVFEFEYLDEKLLEELLDFDEGNK
        G       V E E LD+K+LEELL+++E  K
Subjt:  GEERNEGLVFEFEYLDEKLLEELLDFDEGNK

QNI23892.1 AP2/ERF transcription factor [Camptotheca acuminata]6.5e-2564.76Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEF--PLMNVSSSGSESASLRNGNGGEERNE--GLVFEFEYLDEKLLEELLDF
        FAAEIRDSAR GAR+WLGTF+TAE+AARAYDRAA+ MRG LA LNFP+E+  P    S+  S S+S+     G +R+E    VFEFEYLD+KLLEELLDF
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEF--PLMNVSSSGSESASLRNGNGGEERNE--GLVFEFEYLDEKLLEELLDF

Query:  DEGNK
        +E NK
Subjt:  DEGNK

XP_022958792.1 ethylene-responsive transcription factor ERF098-like [Cucurbita moschata]1.5e-2455.73Show/hide
Query:  MDDRRRRGAEIGGGER----------SFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSE---SASLRNGNG
        MD+  R G + GG  R           FAAEIRDS+R GAR+WLGTF+TAEEAARAYDRAA+ MRG LA LNFP+E+P +  SSSGS    SAS R G+G
Subjt:  MDDRRRRGAEIGGGER----------SFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSE---SASLRNGNG

Query:  GEERNEGLVFEFEYLDEKLLEELLDFDEGNK
        G       V E E LD+K+LEELL+++E  K
Subjt:  GEERNEGLVFEFEYLDEKLLEELLDFDEGNK

XP_038896382.1 ethylene-responsive transcription factor 14-like [Benincasa hispida]1.7e-2861.48Show/hide
Query:  MDDRRRRGAEI---------GGGER-------------SFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSE
        M+D R+R  EI         GGG R              FAAEIRDS RRG RIWLGTF+TAEEAARAYDRAAFRMRG+LATLNFPEE+PLM VSS  S+
Subjt:  MDDRRRRGAEI---------GGGER-------------SFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSE

Query:  SASLRNGNGGEERNEGLVFEFEYLDEKLLEELLDF
        S+SL+N     ER E  V EFE LDE LL+ELLDF
Subjt:  SASLRNGNGGEERNEGLVFEFEYLDEKLLEELLDF

TrEMBL top hitse value%identityAlignment
A0A6J1H2T4 ethylene-responsive transcription factor ERF098-like7.0e-2555.73Show/hide
Query:  MDDRRRRGAEIGGGER----------SFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSE---SASLRNGNG
        MD+  R G + GG  R           FAAEIRDS+R GAR+WLGTF+TAEEAARAYDRAA+ MRG LA LNFP+E+P +  SSSGS    SAS R G+G
Subjt:  MDDRRRRGAEIGGGER----------SFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSE---SASLRNGNG

Query:  GEERNEGLVFEFEYLDEKLLEELLDFDEGNK
        G       V E E LD+K+LEELL+++E  K
Subjt:  GEERNEGLVFEFEYLDEKLLEELLDFDEGNK

A0A6P3YZW9 ethylene-responsive transcription factor ERF096-like2.0e-2463.89Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNG-------NGGEERNEGLVFEFEYLDEKLLEEL
        FA+EIRDSAR G R+WLGTF+TAEEAARAYDRAAF MRG+LA LNFP E  L   SSSGS S+S  +        N  E+ N+  VF FEYLD+KLLEEL
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNG-------NGGEERNEGLVFEFEYLDEKLLEEL

Query:  LDFDEGNK
        LDFD  +K
Subjt:  LDFDEGNK

A0A6P4A708 ethylene-responsive transcription factor ERF096-like2.7e-2463.3Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNG--------NGGEERNEGLVFEFEYLDEKLLEE
        FA+EIRDSAR G R+WLGTF+TAEEAARAYDRAAF MRG+LA LNFP E  L   SSSGS S+S  +         N  E+ N+  VF FEYLD+KLLEE
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNG--------NGGEERNEGLVFEFEYLDEKLLEE

Query:  LLDFDEGNK
        LLDFD  +K
Subjt:  LLDFDEGNK

A0A7G8AUM3 AP2/ERF transcription factor3.2e-2564.76Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEF--PLMNVSSSGSESASLRNGNGGEERNE--GLVFEFEYLDEKLLEELLDF
        FAAEIRDSAR GAR+WLGTF+TAE+AARAYDRAA+ MRG LA LNFP+E+  P    S+  S S+S+     G +R+E    VFEFEYLD+KLLEELLDF
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEF--PLMNVSSSGSESASLRNGNGGEERNE--GLVFEFEYLDEKLLEELLDF

Query:  DEGNK
        +E NK
Subjt:  DEGNK

A0A7N2LY93 AP2/ERF domain-containing protein2.7e-2461.47Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASL---RNGNGGEERNEGL--------VFEFEYLDEKL
        FAAEIRDS R GAR+WLGTF+TAEEAARAYDRAA+ MRG LA LNFP E+PL +  +SGS S+S     + +      EG         VFEFEYLD+KL
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASL---RNGNGGEERNEGL--------VFEFEYLDEKL

Query:  LEELLDFDE
        LEELLD+DE
Subjt:  LEELLDFDE

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI52.8e-1559.49Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVS---SSGSESASLRNGNGGEERNE
        +AAEIRDSAR GAR+WLGTF+TAEEAA AYDRAAFRMRG  A LNFP E    +VS    S   ++   N N     NE
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVS---SSGSESASLRNGNGGEERNE

P93822 Ethylene-responsive transcription factor 142.0e-2154.08Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEELLDFDE
        +AAEIRDS + G R+WLGTFDTAE+AARAYDRAA+ MRGK A LNFP E+ +     +GS S +  + +  ++     VFEFEYLD+ +L+ELL++ E
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEELLDFDE

Q9LSX0 Ethylene-responsive transcription factor ERF0969.1e-2254.46Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEELLDFDEGN
        +AAEIRDS + G R+WLGTFDTAEEAARAYD+AA+ MRG+ A LNFP E+ + +  SS +  A   + +     +   VFEFEYLD+ +LEELL  +EG 
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEELLDFDEGN

Query:  K
        K
Subjt:  K

Q9LTC5 Ethylene-responsive transcription factor ERF0984.4e-2459.43Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEE-FPLMN-------VSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEE
        FAAEIRD +R GAR+WLGTF+TAEEAARAYDRAAF +RG LA LNFP E +P M+        +SS S S+S         +N+  VFEFEYLD+K+LEE
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEE-FPLMN-------VSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEE

Query:  LLDFDE
        LLD +E
Subjt:  LLDFDE

Q9LTC6 Ethylene-responsive transcription factor ERF0952.3e-2560Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSG-------SESASLRNGNGGEERNEGLVFEFEYLDEKLLEEL
        +AAEIRDSAR GAR+WLGTF+TAE+AARAYDRAAF MRG+ A LNFP E+ +M    +G       S S+  R G GG++  E  V EFEYLD+ LLEEL
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSG-------SESASLRNGNGGEERNEGLVFEFEYLDEKLLEEL

Query:  LDFDE
        LD+ E
Subjt:  LDFDE

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 141.4e-2254.08Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEELLDFDE
        +AAEIRDS + G R+WLGTFDTAE+AARAYDRAA+ MRGK A LNFP E+ +     +GS S +  + +  ++     VFEFEYLD+ +L+ELL++ E
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEELLDFDE

AT3G23220.1 Integrase-type DNA-binding superfamily protein1.7e-2660Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSG-------SESASLRNGNGGEERNEGLVFEFEYLDEKLLEEL
        +AAEIRDSAR GAR+WLGTF+TAE+AARAYDRAAF MRG+ A LNFP E+ +M    +G       S S+  R G GG++  E  V EFEYLD+ LLEEL
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSG-------SESASLRNGNGGEERNEGLVFEFEYLDEKLLEEL

Query:  LDFDE
        LD+ E
Subjt:  LDFDE

AT3G23230.1 Integrase-type DNA-binding superfamily protein3.1e-2559.43Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEE-FPLMN-------VSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEE
        FAAEIRD +R GAR+WLGTF+TAEEAARAYDRAAF +RG LA LNFP E +P M+        +SS S S+S         +N+  VFEFEYLD+K+LEE
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEE-FPLMN-------VSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEE

Query:  LLDFDE
        LLD +E
Subjt:  LLDFDE

AT4G17500.1 ethylene responsive element binding factor 15.9e-1660.81Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFP------EEFPLMNVSSSGSESASLRNG
        FAAEIRD A+ GAR+WLGTF+TAE+AA AYDRAAFRMRG  A LNFP      E  P+   S   S S+S  NG
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFP------EEFPLMNVSSSGSESASLRNG

AT5G43410.1 Integrase-type DNA-binding superfamily protein6.5e-2354.46Show/hide
Query:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEELLDFDEGN
        +AAEIRDS + G R+WLGTFDTAEEAARAYD+AA+ MRG+ A LNFP E+ + +  SS +  A   + +     +   VFEFEYLD+ +LEELL  +EG 
Subjt:  FAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEELLDFDEGN

Query:  K
        K
Subjt:  K


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGATCGCCGCCGCAGGGGAGCGGAGATCGGCGGCGGAGAGAGGAGTTTCGCAGCGGAGATTCGGGACTCGGCTCGGCGGGGGGCTCGGATCTGGCTGGGGACGTT
CGACACGGCGGAGGAGGCGGCGAGAGCGTACGATCGAGCGGCGTTTAGAATGAGAGGGAAATTGGCGACTCTGAACTTTCCGGAGGAGTTTCCATTGATGAATGTTTCGA
GCTCTGGATCTGAATCGGCTTCGTTGCGAAATGGAAATGGTGGAGAAGAGAGAAATGAGGGTTTGGTTTTTGAATTTGAGTATTTGGATGAGAAGTTGTTGGAGGAGCTT
CTTGATTTTGATGAGGGGAATAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGATCGCCGCCGCAGGGGAGCGGAGATCGGCGGCGGAGAGAGGAGTTTCGCAGCGGAGATTCGGGACTCGGCTCGGCGGGGGGCTCGGATCTGGCTGGGGACGTT
CGACACGGCGGAGGAGGCGGCGAGAGCGTACGATCGAGCGGCGTTTAGAATGAGAGGGAAATTGGCGACTCTGAACTTTCCGGAGGAGTTTCCATTGATGAATGTTTCGA
GCTCTGGATCTGAATCGGCTTCGTTGCGAAATGGAAATGGTGGAGAAGAGAGAAATGAGGGTTTGGTTTTTGAATTTGAGTATTTGGATGAGAAGTTGTTGGAGGAGCTT
CTTGATTTTGATGAGGGGAATAAATAG
Protein sequenceShow/hide protein sequence
MDDRRRRGAEIGGGERSFAAEIRDSARRGARIWLGTFDTAEEAARAYDRAAFRMRGKLATLNFPEEFPLMNVSSSGSESASLRNGNGGEERNEGLVFEFEYLDEKLLEEL
LDFDEGNK