CuGenDBv2

Gene ID	Sed0001903
Organism	Sechium edule (Chayote v1)
Description	ABC transporter F family member 3
Genome location	LG14:20988540..20992400
RNA-Seq Expression	Sed0001903
Synteny	Sed0001903
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7026769.1 hypothetical protein SDJN02_10775 [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-39

61.33

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Query:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP
        MGL  LRS LRPL  TL SR  T  TPSPS FTSP+  F+L S GAVG                                        PYAWV++TPG+P
Subjt:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP

Query:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM
        IQPNQPNEGSVKRRNEKKRIR RRAFI+AEKKKR+AQLQE  KKK+I+RVERKMAAVAR+RAW+QRLAELQ+LEEEKKKSM
Subjt:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM

XP_022132599.1 uncharacterized protein LOC111005424 [Momordica charantia]

4.1e-42

62.98

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Query:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTS--PRFHLPSSGAVGR---------------------------------------PYAWVRFTPGQP
        MGL  LRS++RPL  TLRSR ST  TP P+ FTS  PRFHL S G+VG                                        PYAWV++TPG+P
Subjt:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTS--PRFHLPSSGAVGR---------------------------------------PYAWVRFTPGQP

Query:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM
        I PNQPNEGSVKRRNEKKRIRLRRAFI+AEKKKRKAQ QE KKKKII+RVERKMAAVARERAW+QRLAELQQLEEE+KKSM
Subjt:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM

XP_022963246.1 uncharacterized protein LOC111463516 [Cucurbita moschata]

2.1e-38

60.22

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Query:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP
        MGL  LRS LRPL  TL SR  T  TPSPS F SP+  F+L S GAVG                                        PYAWV++TPG+P
Subjt:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP

Query:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM
        IQPNQPNEGSVKRRNEKKRIR RRAFI+AEKKKR+AQLQE  KKK+I+RVERKMAAVAR+RAW+QRLAELQ+LE+EKKKSM
Subjt:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM

XP_023002923.1 uncharacterized protein LOC111496683 [Cucurbita maxima]

1.6e-41

64.09

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Query:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP
        MGL  LRS LRPL  TL SR  T  TPSPS FTSP+  F+L S GAVG                                        PYAWV++TPG+P
Subjt:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP

Query:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM
        IQPNQPNEGSVKRRNEKKRIRLRRAFI+AEKKKRKAQLQE KKKKII+RVERKMAAVARERAW+ RLAELQQLEEEKKKSM
Subjt:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM

XP_023518561.1 uncharacterized protein LOC111782028 [Cucurbita pepo subsp. pepo]

4.3e-39

60.77

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Query:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP
        MGL  LRS LRPL  TL SR  T  TPSPS FTSP+  F+L S GAVG                                        PYAWV++TPG+P
Subjt:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP

Query:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM
        IQPNQPNEGSVKRRNEKKRIR RRAFI+AEKKKR++QLQE  KKK+I+RVERKMAAVAR+RAW+QRLAELQ+LEEEKKKSM
Subjt:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUQ0 Uncharacterized protein

1.1e-35

57.46

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Query:  MGLRTLRSILRPLATTLRSR--SSTFSTPSPSTFTSPRFHLPSSGAVGR---------------------------------------PYAWVRFTPGQP
        MGL  LRSI+RPL    RS   SS  + PS  TF+ P FHLPS+G+V                                         PYAWV +TPGQP
Subjt:  MGLRTLRSILRPLATTLRSR--SSTFSTPSPSTFTSPRFHLPSSGAVGR---------------------------------------PYAWVRFTPGQP

Query:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM
        I PNQPNEGSVKRRNEKKRIRL RAFIM+E+KKRKAQ+QE  KKK++ RVERKMAAVARERAW+ RLAELQ+LEEEKKKSM
Subjt:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM

A0A6J1BTI2 uncharacterized protein LOC111005424

2.0e-42

62.98

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Query:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTS--PRFHLPSSGAVGR---------------------------------------PYAWVRFTPGQP
        MGL  LRS++RPL  TLRSR ST  TP P+ FTS  PRFHL S G+VG                                        PYAWV++TPG+P
Subjt:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTS--PRFHLPSSGAVGR---------------------------------------PYAWVRFTPGQP

Query:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM
        I PNQPNEGSVKRRNEKKRIRLRRAFI+AEKKKRKAQ QE KKKKII+RVERKMAAVARERAW+QRLAELQQLEEE+KKSM
Subjt:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM

A0A6J1HFM5 uncharacterized protein LOC111463516

1.0e-38

60.22

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Query:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP
        MGL  LRS LRPL  TL SR  T  TPSPS F SP+  F+L S GAVG                                        PYAWV++TPG+P
Subjt:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP

Query:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM
        IQPNQPNEGSVKRRNEKKRIR RRAFI+AEKKKR+AQLQE  KKK+I+RVERKMAAVAR+RAW+QRLAELQ+LE+EKKKSM
Subjt:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM

A0A6J1KV00 uncharacterized protein LOC111496683

7.6e-42

64.09

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Query:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP
        MGL  LRS LRPL  TL SR  T  TPSPS FTSP+  F+L S GAVG                                        PYAWV++TPG+P
Subjt:  MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPR--FHLPSSGAVGR---------------------------------------PYAWVRFTPGQP

Query:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM
        IQPNQPNEGSVKRRNEKKRIRLRRAFI+AEKKKRKAQLQE KKKKII+RVERKMAAVARERAW+ RLAELQQLEEEKKKSM
Subjt:  IQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSM

A0A7N2LZ47 Uncharacterized protein

8.1e-36

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Query:  GLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPRF---------------HLPS--------------------SGAVGRPYAWVRFTPGQPIQPNQPN
        G+  LR+++RPL+ TL SRSST +TP  STFTSP+                HL S                    S     PYAWV++TPG+PI PN+PN
Subjt:  GLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPRF---------------HLPS--------------------SGAVGRPYAWVRFTPGQPIQPNQPN

Query:  EGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSMA
        EGSVKRRNEKKR+R RRAFI+AEKKKRKAQLQE  +KK I+RVERKMAAVARERAW+QRLAELQQLEEEKKKSMA
Subjt:  EGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVERKMAAVARERAWSQRLAELQQLEEEKKKSMA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51010.1 unknown protein

2.8e-28

60.31

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Query:  PLATTLRSRSSTFS-TPSPSTFTSPRFHLPSSGAVGRPYAWVRFTPGQPIQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVE
        P+A    S S T +  P     T P+         G PYA+V++TPGQPI  N PNEGSVKRRN KKRI  RRAFI++EKKKR+A +QE K+KK I++VE
Subjt:  PLATTLRSRSSTFS-TPSPSTFTSPRFHLPSSGAVGRPYAWVRFTPGQPIQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVE

Query:  RKMAAVARERAWSQRLAELQQLEEEKKKSMA
        RKMAAVAR+RAW++RL ELQQLEEEKKKSM+
Subjt:  RKMAAVARERAWSQRLAELQQLEEEKKKSMA

Sequences

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CDS sequence

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ATGGGGCTTCGAACCCTAAGATCCATTCTCCGACCGTTAGCCACGACCTTGAGATCACGATCCTCCACATTTTCGACACCATCGCCGTCCACTTTCACTTCCCCTAGGTT
TCATCTCCCTTCTTCCGGTGCAGTTGGGAGGCCTTACGCTTGGGTTCGATTTACCCCTGGTCAGCCGATTCAGCCTAATCAACCGAACGAGGGGAGTGTGAAGAGAAGGA
ATGAGAAGAAACGCATTAGGCTGCGCCGCGCGTTTATTATGGCTGAAAAAAAGAAGCGAAAAGCTCAGCTTCAAGAGACAAAGAAGAAGAAAATTATCGAGAGAGTGGAA
CGAAAAATGGCTGCAGTAGCGAGGGAAAGGGCATGGAGTCAAAGATTAGCCGAACTTCAACAGCTCGAAGAAGAGAAGAAAAAATCTATGGCATAG

mRNA sequence

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Protein sequence

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MGLRTLRSILRPLATTLRSRSSTFSTPSPSTFTSPRFHLPSSGAVGRPYAWVRFTPGQPIQPNQPNEGSVKRRNEKKRIRLRRAFIMAEKKKRKAQLQETKKKKIIERVE
RKMAAVARERAWSQRLAELQQLEEEKKKSMA

Sed0001903 (gene) of Chayote v1 genome