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Sed0001905 (gene) of Chayote v1 genome

Gene IDSed0001905
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:27148476..27149019
RNA-Seq ExpressionSed0001905
SyntenySed0001905
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588361.1 hypothetical protein SDJN03_16926, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1275.47Show/hide
Query:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        M+QN+SS++IGLVGAA+TLSAY Q W+SPT+ IT GLLVL+FGLLV EGFISI
Subjt:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
KAG7022210.1 hypothetical protein SDJN02_15940, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-1275.47Show/hide
Query:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        M+QN+SS++IGLVGAA+TLSAY Q W+SPT+ IT GLLVL+FGLLV EGFISI
Subjt:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
XP_016562272.1 PREDICTED: uncharacterized protein LOC107861446 [Capsicum annuum]8.3e-1267.92Show/hide
Query:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        M+QN++S++IGLVGAA TL AY QPW++PT  IT+GL+ L+FGLLVREGFIS+
Subjt:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
XP_022933884.1 uncharacterized protein LOC111441164 [Cucurbita moschata]2.8e-1275.47Show/hide
Query:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        M+QN+SS++IGLVGAA+TLSAY Q W+SPT+ IT GLLVL+FGLLV EGFISI
Subjt:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
XP_023531694.1 uncharacterized protein LOC111793862 [Cucurbita pepo subsp. pepo]2.8e-1275.47Show/hide
Query:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        M+QN+SS++IGLVGAA+TLSAY Q W+SPT+ IT GLLVL+FGLLV EGFISI
Subjt:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
TrEMBL top hitse value%identityAlignment
A0A2G2V9I1 Uncharacterized protein4.0e-1267.92Show/hide
Query:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        M+QN++S++IGLVGAA TL AY QPW++PT  IT+GL+ L+FGLLVREGFIS+
Subjt:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
A0A2G3ACA8 uncharacterized protein LOC1078614464.0e-1267.92Show/hide
Query:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        M+QN++S++IGLVGAA TL AY QPW++PT  IT+GL+ L+FGLLVREGFIS+
Subjt:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
A0A2G3D9L9 Uncharacterized protein4.0e-1267.92Show/hide
Query:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        M+QN++S++IGLVGAA TL AY QPW++PT  IT+GL+ L+FGLLVREGFIS+
Subjt:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
A0A6J1DXU0 uncharacterized protein LOC1110255204.0e-1273.58Show/hide
Query:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        M++N+SS++IGLVGAAITLSAY Q WISPT+ IT+GLLVL+FGLLV EG IS+
Subjt:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
A0A6J1F0Z9 uncharacterized protein LOC1114411641.4e-1275.47Show/hide
Query:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        M+QN+SS++IGLVGAA+TLSAY Q W+SPT+ IT GLLVL+FGLLV EGFISI
Subjt:  MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29034.1 unknown protein8.2e-1056.86Show/hide
Query:  QNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI
        +N+ S++IGLVG A+TL AY Q ++ P   I  GL VL FGLLV EGFIS+
Subjt:  QNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAGAATGTGAGCTCCATGATCATAGGATTGGTGGGAGCAGCCATCACTCTGTCAGCTTATTATCAGCCGTGGATTTCCCCAACGGACGGCATCACCATCGGCCT
TCTTGTTCTTCTTTTCGGCCTTCTTGTTCGTGAAGGTTTCATCTCTATTTAA
mRNA sequenceShow/hide mRNA sequence
TATATTCCCACATGTTCTCTCTCTCTAGAAAGTTGACTTTTTGATTTTGGGTGAAAGAAGGTGTTAAAAGGCTAAGGCATCCAATAAATGAGTTGATGAAAGCTGAATAA
TTTGGGATTGGGAAGCAAAGCAGAAAGGAAAATGGATCAGAATGTGAGCTCCATGATCATAGGATTGGTGGGAGCAGCCATCACTCTGTCAGCTTATTATCAGCCGTGGA
TTTCCCCAACGGACGGCATCACCATCGGCCTTCTTGTTCTTCTTTTCGGCCTTCTTGTTCGTGAAGGTTTCATCTCTATTTAATTACCTTCTTCTTTTCATTTTCATTTC
CCCTAATTTCTTTCTTTATGCCTTTTTTTTTCTTTCCATCTCCAAAATAATTATGGCGGATCCAAGATTTCAGATCCATTTTCATTTCCTCCATCTTTGCAAATTTGAAT
AAGTTGTATAATGAAATGGTACTCATCAGTTGATGTGATGCTTCTTTTGGTTTCTCTGTTTAAATCATGTTGCTAAATAGTGATCAAGATCCTTTCAACTTTCA
Protein sequenceShow/hide protein sequence
MDQNVSSMIIGLVGAAITLSAYYQPWISPTDGITIGLLVLLFGLLVREGFISI