; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001934 (gene) of Chayote v1 genome

Gene IDSed0001934
OrganismSechium edule (Chayote v1)
Descriptionhistone H1-like
Genome locationLG11:1989113..1990499
RNA-Seq ExpressionSed0001934
SyntenySed0001934
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599320.1 Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia]3.3e-5671.43Show/hide
Query:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS-------VK
        KASK KKPS AKRT+SSPTHPPFF+MISEAI+SLKERTGSSQYAITKF+EE+HKQLPSNFRKLLLV LKKLVAADK+VKVKNSYKLPSARS       V 
Subjt:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS-------VK

Query:  EK------SAAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTK
        +K       AA +   A VAK KAKTA KPKP    KPK  AKSK      A A  K KAA KVKKVAPKPKP AKPAK A+T SRTSPGKK  PAAK K
Subjt:  EK------SAAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTK

Query:  K------KIVKSPARKVQARKVKK
        K      K VKSPARKVQARKVKK
Subjt:  K------KIVKSPARKVQARKVKK

KAG7021165.1 Histone H1.2 [Cucurbita argyrosperma subsp. argyrosperma]7.3e-5668.86Show/hide
Query:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKS----
        K SK KK S AK+TKSSPTHPPFFQMISEAI+SLKERTGSSQYAITKF+EE+HK LPSNFRKLLLV LKKLVAADK+VKVKNSYKLPSARSV++KS    
Subjt:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKS----

Query:  -------------AAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPA
                     AA+   AA VAK KAKTA KPKP    KPKT+AKSK      AAA  KPKAA KVKKVAPKPKP +KP+K A+T SRTSPGK+  PA
Subjt:  -------------AAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPA

Query:  AKTKK------KIVKSPARKVQARKVKK
        AK+KK      K VKSP RK+ ARKVKK
Subjt:  AKTKK------KIVKSPARKVQARKVKK

XP_004139246.1 histone H1 [Cucumis sativus]3.9e-5768.49Show/hide
Query:  SSAAVKPVEKASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS
        S A      KASK KKPS AK+ +SSPTHPPF QMISEAI+SLKERTGSSQYAITKF EE+HKQLPSNFRKLLLV LKKLVAA+K+VKVKNSYKLPSARS
Subjt:  SSAAVKPVEKASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS

Query:  VKEKSAAAAAA------------------AAPVAKSKAKTAAKP------KPKPKTVAKSKAAA---AAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSR
        ++ K+AAAAAA                   A VAKSKAKTAAKP      KPKPKTVAKSK  A    A K KAA KVKKVAPKPKP AK AK A+T SR
Subjt:  VKEKSAAAAAA------------------AAPVAKSKAKTAAKP------KPKPKTVAKSKAAA---AAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSR

Query:  TSPGKKPLPAAKTKK------KIVKSPARKVQARKVKK
        TSPGK+  PA K KK      K VKSPARKVQARKVKK
Subjt:  TSPGKKPLPAAKTKK------KIVKSPARKVQARKVKK

XP_022946127.1 histone H1-like [Cucurbita moschata]7.3e-5670.98Show/hide
Query:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS-------VK
        KASK KKPS AKRT+SSPTHPPFF+MISEAI+SLKERTGSSQYAITKF+EE+HK+LPSNFRKLLLV LKKLVAADK+VKVKNSYKLPSARS       V 
Subjt:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS-------VK

Query:  EK------SAAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTK
        +K       AA +   A VAK KAKTA KPKP    KPK+ AKSK      A A  K KAA KVKKVAPKPKP AKPAK A+T SRTSPGKK  PAAK K
Subjt:  EK------SAAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTK

Query:  K------KIVKSPARKVQARKVKK
        K      K VKSPARKVQARKVKK
Subjt:  K------KIVKSPARKVQARKVKK

XP_023521173.1 histone H1-like [Cucurbita pepo subsp. pepo]3.3e-5671.43Show/hide
Query:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS-------VK
        KASK KKPS AKRT+SSPTHPPFF+MISEAI+SLKERTGSSQYAITKF+EE+HKQLPSNFRKLLLV LKKLVAADK+VKVKNSYKLPSARS       V 
Subjt:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS-------VK

Query:  EK------SAAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTK
        +K       AA +   A VAK KAKTA KPKP    KPK  AKSK      A A  K KAA KVKKVAPKPKP AKPAK A+T SRTSPGKK  PAAK K
Subjt:  EK------SAAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTK

Query:  K------KIVKSPARKVQARKVKK
        K      K VKSPARKVQARKVKK
Subjt:  K------KIVKSPARKVQARKVKK

TrEMBL top hitse value%identityAlignment
A0A5D3D4H1 Histone H1-like3.9e-5568.86Show/hide
Query:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKSAAAA
        KASK KKPS AK+ +SSPTHPPF QMISEAI+SLKERTGSSQYAITKF EE+HKQLPSNFRKLLLV LKKLVAADK+VKVKNSYKLPSARS++ K+AAAA
Subjt:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKSAAAA

Query:  AAAA-----------------PVAKSKAKTAAKP------KPKPKTVAKSKAAA---AAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPA
          A                   VAK KAKTAAKP      KPKPKTV KSK  A    A K KAA KVKKVAPKPK  AK  K A+T SRTSPGK+  PA
Subjt:  AAAA-----------------PVAKSKAKTAAKP------KPKPKTVAKSKAAA---AAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPA

Query:  AKTKK------KIVKSPARKVQARKVKK
        AK KK      K VKSPARKVQARKVKK
Subjt:  AKTKK------KIVKSPARKVQARKVKK

A0A6J1CNP7 histone H1-like1.0e-5568.86Show/hide
Query:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKSAAAA
        KASK KKPS AKR KSSPTHPPFFQMISEAI+SLKERTGSSQYAITKF+EE+HKQLPSNFRKLLLV LKKLVAADK+VKVKNSYKLPSARS++ K+AA  
Subjt:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKSAAAA

Query:  AAAAP----------------VAKSKAKTAAKPKP----KPKTVAKS------KAAAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPA
        AA  P                V K KAKTA KPKP    KPKT++KS      KAAAAA KPKAA KV K A K KP A+PAK A+T ++TSPGK+  PA
Subjt:  AAAAP----------------VAKSKAKTAAKPKP----KPKTVAKS------KAAAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPA

Query:  AKTKK------KIVKSPARKVQARKVKK
        AK KK      K VKSPARKVQARKVKK
Subjt:  AKTKK------KIVKSPARKVQARKVKK

A0A6J1FIZ7 histone H1-like1.1e-5468.42Show/hide
Query:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKS----
        K SK KK S AK+TKSSPTHPPFFQMISEAI+SLKERTGSSQYAITKF+EE+HK LPSNFRKLLLV LKKLVAADK+VKVKNSYKLPSARSV++KS    
Subjt:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKS----

Query:  -------------AAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPA
                     AA+   AA VAK KAKTA KPKP    KPKTVAKSK      AAA  KPKAA KVKKVAPKPKP +K +K A+T SRTSPGK+  PA
Subjt:  -------------AAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPA

Query:  AKTKK------KIVKSPARKVQARKVKK
         K KK      K VKSP RK+ ARKVKK
Subjt:  AKTKK------KIVKSPARKVQARKVKK

A0A6J1G2W2 histone H1-like3.5e-5670.98Show/hide
Query:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS-------VK
        KASK KKPS AKRT+SSPTHPPFF+MISEAI+SLKERTGSSQYAITKF+EE+HK+LPSNFRKLLLV LKKLVAADK+VKVKNSYKLPSARS       V 
Subjt:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS-------VK

Query:  EK------SAAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTK
        +K       AA +   A VAK KAKTA KPKP    KPK+ AKSK      A A  K KAA KVKKVAPKPKP AKPAK A+T SRTSPGKK  PAAK K
Subjt:  EK------SAAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTK

Query:  K------KIVKSPARKVQARKVKK
        K      K VKSPARKVQARKVKK
Subjt:  K------KIVKSPARKVQARKVKK

A0A6J1KEC3 histone H1-like6.0e-5670.98Show/hide
Query:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS-------VK
        KASK KKPS AKRT+SSPTHPPFF+MISEAI+SLKERTGSSQYAITKF+EE+HKQLPSNFRKLLLV LKKLVAADK+VKVKNSYKLPSARS       V 
Subjt:  KASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARS-------VK

Query:  EK------SAAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTK
        +K       AA +   A VAK KAKTA KPKP    KPK  AKSK      A A  K KAA KVKKVAPKPKP AKPAK A+T SR SPGKK  PAAK K
Subjt:  EK------SAAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKA-----AAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTK

Query:  K------KIVKSPARKVQARKVKK
        K      K VKSPARKVQARKVKK
Subjt:  K------KIVKSPARKVQARKVKK

SwissProt top hitse value%identityAlignment
P08283 Histone H17.4e-2746.43Show/hide
Query:  VEKASKPK--KPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKS
        VEK  K K  KP  A + ++  +HP + +MI +AI+SLKE+ GSSQYAI KF EE+ KQLP+NF+KLLL  LKK VA+ K++KVK S+KL +A      +
Subjt:  VEKASKPK--KPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKS

Query:  AAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKAAAAAVKPKAAVKVKKVAPKPKPVA-------------KPAKAARTSSRTSPGK----------
           A  AA     KAK AAKPK     KPK  +K+KA AA  K KAA K K VA K KP A             KPAK A+TS +T+PGK          
Subjt:  AAAAAAAAPVAKSKAKTAAKPKP----KPKTVAKSKAAAAAVKPKAAVKVKKVAPKPKPVA-------------KPAKAARTSSRTSPGK----------

Query:  KPLPAAKTKKKIVKSPARKVQARK
        K +P    K K VKSP +KV  ++
Subjt:  KPLPAAKTKKKIVKSPARKVQARK

P23444 Histone H16.1e-2952.56Show/hide
Query:  ASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHK-QLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKSAAA-
        A+K KK +A K+ ++SPTH P+ +M+SEAI SLKERTGSS YAI KF E++HK +LP NFRKLL VQLKKLVA  K+ KVKNSYKL SA     K  AA 
Subjt:  ASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHK-QLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKSAAA-

Query:  ----------AAAAAPVAK--SKAKTAAKPKP--KPKTVAKSKA-AAAAVKPKAAVKVKKVAPKPKPVAKP---AKAARTSSRTSPGKKPLPAAKTKKKI
                   AAA P AK  +KAK A KPKP  KPK V K K  A    KP A  K K    KPKP+AK    AKAA+TS++ +PGKK         K 
Subjt:  ----------AAAAAPVAK--SKAKTAAKPKP--KPKTVAKSKA-AAAAVKPKAAVKVKKVAPKPKPVAKP---AKAARTSSRTSPGKKPLPAAKTKKKI

Query:  VKSPARKVQARKVKK
          +P RK  +RK KK
Subjt:  VKSPARKVQARKVKK

P26569 Histone H1.26.5e-3148.22Show/hide
Query:  MSSAAVKPVEKASKPKKPSAAKRTK-----SSPT-------HPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIV
        + S   KP  K  K KK + AK TK     ++PT       HP + +MI +AI++LKERTGSSQYAI KF EE+HK LP  FRKLLLV LK+LVA++K+V
Subjt:  MSSAAVKPVEKASKPKKPSAAKRTK-----SSPT-------HPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIV

Query:  KVKNSYKLPSARS---------VKEKSAAAA----AAAAPVAKSKAKTAAKPKPKP--------KTVAKSKAAAAAVKPK-----AAVKVKKVAPKPKPV
        KVK S+K+PSARS         VK+K+   A      AA VA +KAK AAK   KP        K  AK KA   A KPK     A  K K VA KPK  
Subjt:  KVKNSYKLPSARS---------VKEKSAAAA----AAAAPVAKSKAKTAAKPKPKP--------KTVAKSKAAAAAVKPK-----AAVKVKKVAPKPKPV

Query:  AKPAKAARTSSRTSPGKKPLPAAK---------TKKKIVKSPARKVQARKVKK
         +PAKA+RTS+RTSPGKK    AK          K   VKSPA++   RK KK
Subjt:  AKPAKAARTSSRTSPGKKPLPAAK---------TKKKIVKSPARKVQARKVKK

P37218 Histone H13.4e-3246.43Show/hide
Query:  EKASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPS-------ARSV
        +K +K KKP+A ++  ++PTHPP+F+MI +AI++LKERTGSSQ+AITKF EE+ K LPSNF+KLLL QLKK VA++K+VKVKNSYKLPS       A   
Subjt:  EKASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPS-------ARSV

Query:  KEKSAAA------------------------------AAAAAPVAKSKAKTAAKPKPKPKTVAKSK-AAAAAVKPKAAVKVKKVAPKPKPVAKP------
        K+K AAA                              AA A P AK+K    AKP  K K VAK+K  AAAA KPKAAVK K    K K   KP      
Subjt:  KEKSAAA------------------------------AAAAAPVAKSKAKTAAKPKPKPKTVAKSK-AAAAAVKPKAAVKVKKVAPKPKPVAKP------

Query:  --AKAARTSSRTSPGKKPLPAA---------KTKKKIVKSPARKVQARKVKK
          AK A+T++RT+P +K  P A         K   K VKSPA+K   ++ +K
Subjt:  --AKAARTSSRTSPGKKPLPAA---------KTKKKIVKSPARKVQARKVKK

Q9M5W4 Histone H17.2e-3057.28Show/hide
Query:  SAAVK-PVEKASKPKKPSAAKRTKSSPT--HPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSA
        +AAVK P EK    KK  AAK+ KS  T  HP FF+MIS+AI +LKERTGSSQYAI KF E++HKQLPSNFRKLLL  LKKLVA+ K+VKVKNS+KLPSA
Subjt:  SAAVK-PVEKASKPKKPSAAKRTKSSPT--HPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSA

Query:  RSVKEKS-AAAAAAAAPVAKSKAKTA---AKPKPKPKTVAKSKAAAAAVKPK--AAVKVKKVAPKPKPV-AKPAKAARTSSRTSPGKKPLPAAKTKKKIV
        R+    + A       P   +K KTA   AKPK K K  AK+KA    V  K  AA    K A KPK V AKPAK A+T++  SPGKK     K K K V
Subjt:  RSVKEKS-AAAAAAAAPVAKSKAKTA---AKPKPKPKTVAKSKAAAAAVKPK--AAVKVKKVAPKPKPV-AKPAKAARTSSRTSPGKKPLPAAKTKKKIV

Query:  KSPARK
        KSPA K
Subjt:  KSPARK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein1.4e-2545.38Show/hide
Query:  KPVEKASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKS
        K V++  + K  +AA + ++  +HP + +MI +AI++LKERTGSSQYAI KF EE+ K+LP  FRKLLL+ LK+LVA+ K+VKVK S+KLPSA S K  S
Subjt:  KPVEKASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKS

Query:  AAAAAAAAPVAKSKAKTAAKPKPKPKTVAKSKA-AAAAVKPK---------------------AAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPA
          AAA  +  AK K  T A  K K K  A SKA    AVKPK                     AA K K V  KPK  A+PAKAA+T+  TSP KK + A
Subjt:  AAAAAAAAPVAKSKAKTAAKPKPKPKTVAKSKA-AAAAVKPK---------------------AAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPA

Query:  AK----------------TKKKIVKSPARKVQARKVKK
         K                 K K VKSPA++  +R VKK
Subjt:  AK----------------TKKKIVKSPARKVQARKVKK

AT2G18050.1 histone H1-31.7e-1037.5Show/hide
Query:  VKPVEKASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQ-LPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKE
        +K    A KP+KP        + THPP+FQMI EA++ LKE+ GSS YAI K  EE+HK  LP +FRK L +QLK  VA  K+VK++ SYKL     +  
Subjt:  VKPVEKASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQ-LPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKE

Query:  KSAAAAAAAAPVAKSKAKTAAKPKPKPKTVAKSKAAAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKK
        +            +   K     K + K + K +  +++ +PK  V V K   K K   K A+  + S ++S GKK
Subjt:  KSAAAAAAAAPVAKSKAKTAAKPKPKPKTVAKSKAAAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKK

AT2G18050.2 histone H1-32.1e-0536.99Show/hide
Query:  MISEAIISLKERTGSSQYAITKFNEERHKQ-LPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKSAAAAAAAAPVAKSKAKTAAKPKPKPKTV
        MI EA++ LKE+ GSS YAI K  EE+HK  LP +FRK L +QLK  VA  K+VK++ SYKL     +  +            +   K     K + K +
Subjt:  MISEAIISLKERTGSSQYAITKFNEERHKQ-LPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKSAAAAAAAAPVAKSKAKTAAKPKPKPKTV

Query:  AKSKAAAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKK
         K +  +++ +PK  V V K   K K   K A+  + S ++S GKK
Subjt:  AKSKAAAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKK

AT2G30620.1 winged-helix DNA-binding transcription factor family protein4.6e-3248.22Show/hide
Query:  MSSAAVKPVEKASKPKKPSAAKRTK-----SSPT-------HPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIV
        + S   KP  K  K KK + AK TK     ++PT       HP + +MI +AI++LKERTGSSQYAI KF EE+HK LP  FRKLLLV LK+LVA++K+V
Subjt:  MSSAAVKPVEKASKPKKPSAAKRTK-----SSPT-------HPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIV

Query:  KVKNSYKLPSARS---------VKEKSAAAA----AAAAPVAKSKAKTAAKPKPKP--------KTVAKSKAAAAAVKPK-----AAVKVKKVAPKPKPV
        KVK S+K+PSARS         VK+K+   A      AA VA +KAK AAK   KP        K  AK KA   A KPK     A  K K VA KPK  
Subjt:  KVKNSYKLPSARS---------VKEKSAAAA----AAAAPVAKSKAKTAAKPKPKP--------KTVAKSKAAAAAVKPK-----AAVKVKKVAPKPKPV

Query:  AKPAKAARTSSRTSPGKKPLPAAK---------TKKKIVKSPARKVQARKVKK
         +PAKA+RTS+RTSPGKK    AK          K   VKSPA++   RK KK
Subjt:  AKPAKAARTSSRTSPGKKPLPAAK---------TKKKIVKSPARKVQARKVKK

AT2G30620.2 winged-helix DNA-binding transcription factor family protein1.1e-2545.37Show/hide
Query:  MSSAAVKPVEKASKPKKPSAAKRTK-----SSPT-------HPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIV
        + S   KP  K  K KK + AK TK     ++PT       HP + +MI +AI++LKERTGSSQYAI KF EE+HK LP  FRKLLLV LK+LVA++K+V
Subjt:  MSSAAVKPVEKASKPKKPSAAKRTK-----SSPT-------HPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIV

Query:  KVKNSYKLPSARSVKEKSAAAAAAAAPVAKSKAKTAAKPKPKPKTVAKSKAAAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAK--
        KVK S+K+PSARS                      AA PKP           AA VK KA V           VAKP KA+RTS+RTSPGKK    AK  
Subjt:  KVKNSYKLPSARSVKEKSAAAAAAAAPVAKSKAKTAAKPKPKPKTVAKSKAAAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAK--

Query:  -------TKKKIVKSPARKVQARKVKK
                K   VKSPA++   RK KK
Subjt:  -------TKKKIVKSPARKVQARKVKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCGCCGCCGTTAAACCGGTGGAAAAAGCTTCGAAGCCTAAGAAACCATCTGCTGCGAAGAGGACCAAATCTTCGCCGACTCATCCTCCATTCTTTCAGATGAT
TAGCGAAGCGATCATATCGCTGAAGGAAAGAACCGGATCGAGTCAATACGCGATTACAAAGTTCAACGAAGAGAGGCACAAGCAATTGCCGTCCAATTTCAGGAAGCTAT
TGCTCGTTCAATTGAAGAAACTAGTCGCCGCCGATAAAATCGTAAAGGTAAAAAACTCCTACAAGCTTCCATCGGCGCGATCTGTTAAGGAAAAATCCGCCGCCGCCGCA
GCAGCAGCAGCGCCAGTCGCGAAATCGAAGGCGAAAACAGCCGCAAAACCTAAACCGAAGCCGAAGACGGTTGCGAAATCCAAGGCCGCCGCTGCCGCGGTGAAGCCTAA
GGCTGCAGTGAAGGTCAAGAAAGTTGCTCCGAAGCCAAAACCTGTAGCGAAACCTGCTAAGGCTGCGAGAACTTCGTCGCGAACTTCGCCGGGAAAGAAACCGCTACCGG
CGGCGAAGACGAAGAAGAAGATTGTTAAATCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGTCAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTAGATTTAACGTTTCGAGTTCGAGCTCCATTGATTCCGATCATGTCTTCCGCCGCCGTTAAACCGGTGGAAAAAGCTTCGAAGCCTAAGAAACCATCTGCTG
CGAAGAGGACCAAATCTTCGCCGACTCATCCTCCATTCTTTCAGATGATTAGCGAAGCGATCATATCGCTGAAGGAAAGAACCGGATCGAGTCAATACGCGATTACAAAG
TTCAACGAAGAGAGGCACAAGCAATTGCCGTCCAATTTCAGGAAGCTATTGCTCGTTCAATTGAAGAAACTAGTCGCCGCCGATAAAATCGTAAAGGTAAAAAACTCCTA
CAAGCTTCCATCGGCGCGATCTGTTAAGGAAAAATCCGCCGCCGCCGCAGCAGCAGCAGCGCCAGTCGCGAAATCGAAGGCGAAAACAGCCGCAAAACCTAAACCGAAGC
CGAAGACGGTTGCGAAATCCAAGGCCGCCGCTGCCGCGGTGAAGCCTAAGGCTGCAGTGAAGGTCAAGAAAGTTGCTCCGAAGCCAAAACCTGTAGCGAAACCTGCTAAG
GCTGCGAGAACTTCGTCGCGAACTTCGCCGGGAAAGAAACCGCTACCGGCGGCGAAGACGAAGAAGAAGATTGTTAAATCGCCGGCGAGGAAAGTCCAGGCAAGGAAAGT
CAAGAAATGAAACGGTTAGTGTGTTTTGATTGAATTCTAGGGTTTGTAGTTTCCTACTACTTGTTCGTAGCGATGTAAATTAGGGATAACGAGATTGAAATCGTTGCATT
TATACTTGTTATTCAAATTCACTTTGATGAATTCTCTAGGGTTTATAAAAGTTATCGTTCTCTTCTTTGAGACTGTTCAGTGCTGAGATTCTGTGAGTATTTTTTTACAT
TTGGGTTTTAAAAGCTTTGATCGTTGCTTCAATGGCGGATTTCCCGTTTCTGAAAGCTTTGTTTTGGTCGCACGTGCGTATCTAATTCCGTAACGTCGTTTCAAAATCCG
TTATAATCCACGTTGGATTTGATTTTTTTTTTTTTAAAAGAATAATTTGGATTTATATATACATTGTCACG
Protein sequenceShow/hide protein sequence
MSSAAVKPVEKASKPKKPSAAKRTKSSPTHPPFFQMISEAIISLKERTGSSQYAITKFNEERHKQLPSNFRKLLLVQLKKLVAADKIVKVKNSYKLPSARSVKEKSAAAA
AAAAPVAKSKAKTAAKPKPKPKTVAKSKAAAAAVKPKAAVKVKKVAPKPKPVAKPAKAARTSSRTSPGKKPLPAAKTKKKIVKSPARKVQARKVKK