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Sed0001937 (gene) of Chayote v1 genome

Gene IDSed0001937
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG05:33201938..33202252
RNA-Seq ExpressionSed0001937
SyntenySed0001937
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031619.1 hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa]2.5e-2066.35Show/hide
Query:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEV
        MAK CL+F  I+  ILLIQ +T SIAT T   PLSA  EP E    E S  AEAP+ RRLGKHH DKSVA GGVII G VT IFA VFCYIRVTR+R  V
Subjt:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEV

Query:  DSVH
        DSVH
Subjt:  DSVH

KAE8645753.1 hypothetical protein Csa_020263 [Cucumis sativus]9.2e-1560.87Show/hide
Query:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIR
        MAK CL+F  I+  I LIQ IT SIAT T   PLS   E  E    E S+ AEAP+ RRLGKHH DKS+A GGVII G VT +FA VFCYIR
Subjt:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIR

KAG2397280.1 uncharacterized protein HKW66_Vig0144840 [Vigna angularis]6.2e-1170.97Show/hide
Query:  ELEPLETSYGEESKAAEAPKSRRLGKHH-VDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRR
        E EP      +ESK+AEAP+ RRLGKHH  DKSVA GGVII G VT IFA VFCYIRVTRRR
Subjt:  ELEPLETSYGEESKAAEAPKSRRLGKHH-VDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRR

KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1760.58Show/hide
Query:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEV
        MAK  L+   IL  ILLIQ + ++  T T H  +SA  EP ET   E    AEAP+ RRLGKHHVDKSVA GGVII G VT +FA VFCYIRVTR+R  V
Subjt:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEV

Query:  DSVH
        DSVH
Subjt:  DSVH

KAG7011935.1 hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-1760.58Show/hide
Query:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEV
        MAK  L+   IL  ILLIQ + ++  T T H  +SA  EP ET   E    AEAP+ RRLGKHHVDKSVA GGVII G VT +FA VFCYIRVTR+R  V
Subjt:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEV

Query:  DSVH
        DSVH
Subjt:  DSVH

TrEMBL top hitse value%identityAlignment
A0A0A0K3N0 Uncharacterized protein4.6e-2062.5Show/hide
Query:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEV
        MAK CL+F  I+  I LIQ IT SIAT T   PLS   E  E    E S+ AEAP+ RRLGKHH DKS+A GGVII G VT +FA VFCYIRVTR+R  V
Subjt:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEV

Query:  DSVH
        DSVH
Subjt:  DSVH

A0A0L9V5U3 Uncharacterized protein3.0e-1170.97Show/hide
Query:  ELEPLETSYGEESKAAEAPKSRRLGKHH-VDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRR
        E EP      +ESK+AEAP+ RRLGKHH  DKSVA GGVII G VT IFA VFCYIRVTRRR
Subjt:  ELEPLETSYGEESKAAEAPKSRRLGKHH-VDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRR

A0A0S3SBR1 Uncharacterized protein3.0e-1170.97Show/hide
Query:  ELEPLETSYGEESKAAEAPKSRRLGKHH-VDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRR
        E EP      +ESK+AEAP+ RRLGKHH  DKSVA GGVII G VT IFA VFCYIRVTRRR
Subjt:  ELEPLETSYGEESKAAEAPKSRRLGKHH-VDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRR

A0A5D3C590 Uncharacterized protein1.2e-2066.35Show/hide
Query:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEV
        MAK CL+F  I+  ILLIQ +T SIAT T   PLSA  EP E    E S  AEAP+ RRLGKHH DKSVA GGVII G VT IFA VFCYIRVTR+R  V
Subjt:  MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEV

Query:  DSVH
        DSVH
Subjt:  DSVH

A0A6A1VD51 Uncharacterized protein5.1e-1163.89Show/hide
Query:  PLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEVDSVH
        P+S   EP    Y E S  AEAP +R+L KHH DKSVA GGVII G VT IFA VFCYIRVTRRR   D VH
Subjt:  PLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEVDSVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein8.3e-0639Show/hide
Query:  AKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEA---PKSRRLGKHH--VDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRR
        AKH ++  F+LT++      + + A+     P + +L   E   GEE++A E     ++ R G HH  V++SVA GGVI+ G  TT   VVFCYIR TR+
Subjt:  AKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEA---PKSRRLGKHH--VDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGCATTGCCTGATCTTCTACTTCATTCTGACCCACATTTTACTGATTCAACCTATAACGGCTTCAATTGCCACTGATACACATCACTGCCCTCTATCGGCCGA
GCTGGAGCCATTGGAGACCAGCTATGGAGAAGAGTCGAAAGCGGCCGAGGCACCGAAGAGCCGACGGCTGGGAAAGCACCACGTGGACAAGTCAGTGGCCGTAGGAGGAG
TCATCATCGTCGGGTTTGTAACGACCATTTTTGCTGTTGTTTTTTGTTATATTCGGGTTACTAGAAGAAGAGTTGAGGTTGATTCCGTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGCATTGCCTGATCTTCTACTTCATTCTGACCCACATTTTACTGATTCAACCTATAACGGCTTCAATTGCCACTGATACACATCACTGCCCTCTATCGGCCGA
GCTGGAGCCATTGGAGACCAGCTATGGAGAAGAGTCGAAAGCGGCCGAGGCACCGAAGAGCCGACGGCTGGGAAAGCACCACGTGGACAAGTCAGTGGCCGTAGGAGGAG
TCATCATCGTCGGGTTTGTAACGACCATTTTTGCTGTTGTTTTTTGTTATATTCGGGTTACTAGAAGAAGAGTTGAGGTTGATTCCGTTCATTGA
Protein sequenceShow/hide protein sequence
MAKHCLIFYFILTHILLIQPITASIATDTHHCPLSAELEPLETSYGEESKAAEAPKSRRLGKHHVDKSVAVGGVIIVGFVTTIFAVVFCYIRVTRRRVEVDSVH