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Sed0001939 (gene) of Chayote v1 genome

Gene IDSed0001939
OrganismSechium edule (Chayote v1)
DescriptionDNA-binding protein S1FA-like
Genome locationLG02:45245598..45248365
RNA-Seq ExpressionSed0001939
SyntenySed0001939
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006779 - DNA binding protein S1FA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442666.1 PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]5.4e-2888.46Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        MASANGKGNV+NDVEA G NP LIVL++VGGLLLTFLVGNYALYLYAQK+LPPKKKKPVSKKKM++ERLKQGVSAPGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

XP_022145490.1 DNA-binding protein S1FA-like [Momordica charantia]1.2e-2788.46Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        MAS+N KGNV+NDVEA G NPGLIVL++VGGLLL FLVGNYALYLYAQK+LPPKKKKPVSKKKMRKERLKQGVSAPGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

XP_022934038.1 DNA-binding protein S1FA-like [Cucurbita moschata]2.1e-2787.18Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        MASANGKGNV+NDVEA GLNP LIVL++VGGLLL FLVGNYALYLYAQK+LPPKKKKPVSKKKM+++RLKQGVSAPGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

XP_023005220.1 DNA-binding protein S1FA-like isoform X1 [Cucurbita maxima]2.7e-2785.9Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        MASANGKGNVMNDV A G NPGL+VL++VGGLLL FL+GNYALYLYAQK+LPPKKKKPVSKKKM++ERLKQGVSAPGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

XP_038905724.1 DNA-binding protein S1FA-like [Benincasa hispida]2.7e-2787.18Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        MASANGKGNV+NDVEA G NP LIVL++VGGLLL FLVGNYALYLYAQK+LPPKKKKPVSKKKM++ERLKQGVSAPGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

TrEMBL top hitse value%identityAlignment
A0A1S3B680 DNA-binding protein S1FA-like2.6e-2888.46Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        MASANGKGNV+NDVEA G NP LIVL++VGGLLLTFLVGNYALYLYAQK+LPPKKKKPVSKKKM++ERLKQGVSAPGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

A0A6J1CUM0 DNA-binding protein S1FA-like5.9e-2888.46Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        MAS+N KGNV+NDVEA G NPGLIVL++VGGLLL FLVGNYALYLYAQK+LPPKKKKPVSKKKMRKERLKQGVSAPGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

A0A6J1F6J1 DNA-binding protein S1FA-like1.0e-2787.18Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        MASANGKGNV+NDVEA GLNP LIVL++VGGLLL FLVGNYALYLYAQK+LPPKKKKPVSKKKM+++RLKQGVSAPGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

A0A6J1IZV9 DNA-binding protein S1FA-like1.0e-2787.18Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        MASANGKGNV+NDVEA GLNP LIVL++VGGLLL FLVGNYALYLYAQK+LPPKKKKPVSKKKM+++RLKQGVSAPGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

A0A6J1KWU8 DNA-binding protein S1FA-like isoform X11.3e-2785.9Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        MASANGKGNVMNDV A G NPGL+VL++VGGLLL FL+GNYALYLYAQK+LPPKKKKPVSKKKM++ERLKQGVSAPGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

SwissProt top hitse value%identityAlignment
P42551 DNA-binding protein S1FA19.7e-2075Show/hide
Query:  EANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        EA GLNPGLIVL+VVGG LL FL+ NY LY+YAQK+LPP+KKKPVSKKK+++E+LKQGV  PGE
Subjt:  EANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

P42552 DNA-binding protein S1FA1.9e-2379.41Show/hide
Query:  MNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        +N+VEA GLNPGLIVL+V+GGLLLTFLVGN+ LY YAQK+LPPKKKKP+SKKKM++ERLKQGV+ PGE
Subjt:  MNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

Q42337 DNA-binding protein S1FA21.5e-2064.1Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        M+S    G  +  VEA GLNPGLIVL+V+GGLL+TFL+ NY +Y+YAQK+LPP+KKKP+SKKK+++E+LKQGV  PGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

Q7XLX6 DNA-binding protein S1FA23.3e-2069.33Show/hide
Query:  ANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        A+   NV+ +    GLNPG+IVLIVV   LL F VGNYALY+YAQK+LPP+KKKPVSKKKM++E+LKQGVSAPGE
Subjt:  ANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

Q93VI0 DNA-binding protein S1FA31.8e-2176.92Show/hide
Query:  VEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        +E+ GLNPGLIVL+V+GGLLLTFLVGN+ LY YAQK+LPP+KKKPVSKKKM+KE++KQGV  PGE
Subjt:  VEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

Arabidopsis top hitse value%identityAlignment
AT2G37120.1 S1FA-like DNA-binding protein1.1e-2164.1Show/hide
Query:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        M+S    G  +  VEA GLNPGLIVL+V+GGLL+TFL+ NY +Y+YAQK+LPP+KKKP+SKKK+++E+LKQGV  PGE
Subjt:  MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

AT3G09735.1 S1FA-like DNA-binding protein1.2e-2276.92Show/hide
Query:  VEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        +E+ GLNPGLIVL+V+GGLLLTFLVGN+ LY YAQK+LPP+KKKPVSKKKM+KE++KQGV  PGE
Subjt:  VEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

AT3G53370.1 S1FA-like DNA-binding protein6.9e-2175Show/hide
Query:  EANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        EA GLNPGLIVL+VVGG LL FL+ NY LY+YAQK+LPP+KKKPVSKKK+++E+LKQGV  PGE
Subjt:  EANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE

AT3G53370.2 S1FA-like DNA-binding protein1.3e-0669.7Show/hide
Query:  YAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE
        +A K+LPP+KKKPVSKKK+++E+LKQGV  PGE
Subjt:  YAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAGCCAATGGCAAGGGAAACGTTATGAATGATGTTGAAGCAAACGGATTGAATCCAGGGCTTATAGTACTTATTGTTGTTGGTGGGTTGCTGCTGACTTTCCT
CGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAGTCTCCCACCCAAGAAGAAAAAGCCAGTATCTAAAAAGAAGATGAGGAAGGAAAGACTGAAACAAGGAGTGT
CTGCACCTGGAGAGTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAACTAATAAATGTATTTTCCATGCTTTCAAAAAAAAATATTTTCCAACTAAAAAAGGTAAAATACGTGTGAGAAGAGCGGCCCATAGAGACAGCAGAATTCGGGTG
GACCAAATCGCCGATCTGTATGAATCTTCCCCTTTTCTAAGATCTAACTTGACATTTTTCCGTCAACGCTTCACCGCCGATCCGATCCGATCCGTACAATTTCTCAGATT
CAGATTCTTATAGCCGGCGGCGGATCTGTCCAGCTCTGAGTCGCAGTCATGGCTTCAGCCAATGGCAAGGGAAACGTTATGAATGATGTTGAAGCAAACGGATTGAATCC
AGGGCTTATAGTACTTATTGTTGTTGGTGGGTTGCTGCTGACTTTCCTCGTAGGGAACTATGCACTTTACTTGTATGCACAGAAGAGTCTCCCACCCAAGAAGAAAAAGC
CAGTATCTAAAAAGAAGATGAGGAAGGAAAGACTGAAACAAGGAGTGTCTGCACCTGGAGAGTAAAAAAAATAAACTTCCTGAGGTTTCCTTCTCTGTAGAACGTTTCGA
TTTTTGTTTTTTAGAACCTGCATAGAGTGGCTAGAAAATATTACAGTTGTTTCTTTCTTTTTATCTACTGTCTTTAACTCTTTAGGAATCCAACTTGATGGTGAGTTCTT
AACTCATATTACATTACATGGGCTCTTTTCTTAAGGTTACATTGCCTCTTTTCTACTTATTCCCCTCCTTTTGGCACTCACCTGAGATTTTTGTTTCTCCACCTTTAAAC
AGCCTTAACTCGGTCCTTTTAACTATTAGAATCTTTTCCTTTTTTGCCTTGAATCTTTCAATAAATGATGGAGAGAAAGAGAAAGAGAGAGAGAGGGATTGCATGGTTTA
GTGACTGAGTTGTTTAACTCTGTTTAGAAGATTACAAAACATCAGCCTTAGAGGGAAGGTGATGGAAGGCTTGGGATCAGGGAAGGTGCCAGCCCGCCCCTCCAATCTTT
GTAGGATCGGATGCAGG
Protein sequenceShow/hide protein sequence
MASANGKGNVMNDVEANGLNPGLIVLIVVGGLLLTFLVGNYALYLYAQKSLPPKKKKPVSKKKMRKERLKQGVSAPGE