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Sed0001949 (gene) of Chayote v1 genome

Gene IDSed0001949
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF1677)
Genome locationLG02:49616868..49617338
RNA-Seq ExpressionSed0001949
SyntenySed0001949
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022934401.1 uncharacterized protein LOC111441587 [Cucurbita moschata]1.2e-4576.15Show/hide
Query:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSS-
        ME EVVVTCECCGLKEDCTQ YI+EVKAKFEGKWLCGLCSEAVRDEA RS  PL GL+EAV AHMSFCRKF+ANPA+RVADG+RL+LRRRS+DVSASSS 
Subjt:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSS-

Query:  -----SQARNFAASSTASQVGFDMSSLSTF
             S A  +  S ++SQVGFDMSSLS +
Subjt:  -----SQARNFAASSTASQVGFDMSSLSTF

XP_022955973.1 uncharacterized protein LOC111457807 [Cucurbita moschata]2.7e-4577.42Show/hide
Query:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSA--SS
        ME E+VVTC+CCGLKEDCTQ YI+EVKAKFEGKWLCGLCSEAVRDEA RS  PL GL+EAV+AHMSFCRKF++NPAVRVADGMRL+LRRRS+D+SA  SS
Subjt:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSA--SS

Query:  SSQARNFAASSTASQVGFDMSSLS
        SS ++ +  S+++SQVGFDMSSLS
Subjt:  SSQARNFAASSTASQVGFDMSSLS

XP_022974390.1 uncharacterized protein LOC111473071 [Cucurbita maxima]1.6e-4576.15Show/hide
Query:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSS-
        ME EVVVTCECCGLKEDCTQ YI+EVKAKFEGKWLCGLCSEAVRDEA RS  PL GL+EAV AHMSFCRKF+ANPA+RVADG+RL+LRRRS+DVSASSS 
Subjt:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSS-

Query:  -----SQARNFAASSTASQVGFDMSSLSTF
             S A  +  S ++SQVGFDMSSLS +
Subjt:  -----SQARNFAASSTASQVGFDMSSLSTF

XP_022980009.1 uncharacterized protein LOC111479543 [Cucurbita maxima]2.1e-4578.05Show/hide
Query:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSA-SSS
        ME E+VVTC+CCGLKEDCTQ YI+EVKAKFEGKWLCGLCSEAVRDEA RS  PL GL+EAV+AHMSFCRKF++NPAVRVADGMRL+LRRRS+D+SA SSS
Subjt:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSA-SSS

Query:  SQARNFAASSTASQVGFDMSSLS
        S ++ +  S+++SQVGFDMSSLS
Subjt:  SQARNFAASSTASQVGFDMSSLS

XP_023540731.1 uncharacterized protein LOC111801010 [Cucurbita pepo subsp. pepo]1.6e-4576.15Show/hide
Query:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSS-
        ME EVVVTCECCGLKEDCTQ YI+EVKAKFEGKWLCGLCSEAVRDEA RS  PL GL+EAV AHMSFCRKF+ANPA+RVADG+RL+LRRRS+DVSASSS 
Subjt:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSS-

Query:  -----SQARNFAASSTASQVGFDMSSLSTF
             S A  +  S ++SQVGFDMSSLS +
Subjt:  -----SQARNFAASSTASQVGFDMSSLSTF

TrEMBL top hitse value%identityAlignment
A0A5A7U0I4 Uncharacterized protein6.5e-4576.56Show/hide
Query:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPG-LDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSA---
        ME E+VVTC+CCGLKEDCTQ YI+EVKAKFEGKWLCGLCSEAVRDEA RS  PL G L+EAV+AHMSFCRKF++NPAVRVADGMRL+LRRRS+DVS+   
Subjt:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPG-LDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSA---

Query:  SSSSQARNFAASSTASQVGFDMSSLSTF
        SSSS A+ +A S+++SQVGFDMSSLS +
Subjt:  SSSSQARNFAASSTASQVGFDMSSLSTF

A0A6J1F1Q0 uncharacterized protein LOC1114415875.9e-4676.15Show/hide
Query:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSS-
        ME EVVVTCECCGLKEDCTQ YI+EVKAKFEGKWLCGLCSEAVRDEA RS  PL GL+EAV AHMSFCRKF+ANPA+RVADG+RL+LRRRS+DVSASSS 
Subjt:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSS-

Query:  -----SQARNFAASSTASQVGFDMSSLSTF
             S A  +  S ++SQVGFDMSSLS +
Subjt:  -----SQARNFAASSTASQVGFDMSSLSTF

A0A6J1GVH2 uncharacterized protein LOC1114578071.3e-4577.42Show/hide
Query:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSA--SS
        ME E+VVTC+CCGLKEDCTQ YI+EVKAKFEGKWLCGLCSEAVRDEA RS  PL GL+EAV+AHMSFCRKF++NPAVRVADGMRL+LRRRS+D+SA  SS
Subjt:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSA--SS

Query:  SSQARNFAASSTASQVGFDMSSLS
        SS ++ +  S+++SQVGFDMSSLS
Subjt:  SSQARNFAASSTASQVGFDMSSLS

A0A6J1IDB2 uncharacterized protein LOC1114730717.7e-4676.15Show/hide
Query:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSS-
        ME EVVVTCECCGLKEDCTQ YI+EVKAKFEGKWLCGLCSEAVRDEA RS  PL GL+EAV AHMSFCRKF+ANPA+RVADG+RL+LRRRS+DVSASSS 
Subjt:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSS-

Query:  -----SQARNFAASSTASQVGFDMSSLSTF
             S A  +  S ++SQVGFDMSSLS +
Subjt:  -----SQARNFAASSTASQVGFDMSSLSTF

A0A6J1IY61 uncharacterized protein LOC1114795431.0e-4578.05Show/hide
Query:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSA-SSS
        ME E+VVTC+CCGLKEDCTQ YI+EVKAKFEGKWLCGLCSEAVRDEA RS  PL GL+EAV+AHMSFCRKF++NPAVRVADGMRL+LRRRS+D+SA SSS
Subjt:  METEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSA-SSS

Query:  SQARNFAASSTASQVGFDMSSLS
        S ++ +  S+++SQVGFDMSSLS
Subjt:  SQARNFAASSTASQVGFDMSSLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72510.1 Protein of unknown function (DUF1677)1.4e-1847.73Show/hide
Query:  VTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRA-----NPAVRVADGMRLLLRR
        VTC+CCGL E+CTQSYI  V+ ++ GKW+CGLCSEAV+ E  R+   L   +EA++ HM+ C KF++     NP   +   MR +LR+
Subjt:  VTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRA-----NPAVRVADGMRLLLRR

AT1G72510.2 Protein of unknown function (DUF1677)1.4e-1847.73Show/hide
Query:  VTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRA-----NPAVRVADGMRLLLRR
        VTC+CCGL E+CTQSYI  V+ ++ GKW+CGLCSEAV+ E  R+   L   +EA++ HM+ C KF++     NP   +   MR +LR+
Subjt:  VTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRA-----NPAVRVADGMRLLLRR

AT1G79770.1 Protein of unknown function (DUF1677)1.8e-1851.76Show/hide
Query:  CECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKF----RANPAVRVADGMRLLLRR
        CECCG++E+CT  YI  V+ KF GKW+CGLCSEAV++E  R      GL+ A+  HMS C +F    R  PA+  AD MR +LRR
Subjt:  CECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKF----RANPAVRVADGMRLLLRR

AT3G22540.1 Protein of unknown function (DUF1677)6.5e-2961.9Show/hide
Query:  VTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRA-NPAVRVADGMRLLLRRRSTDVSASSSSQARNF
        V CECCGL EDCTQ YI+EVK+ F+ KWLCGLCSEAVRDE +R    +  +DEAV AH+SFC KF+  NPAV VADGMR +LRRRS +++ SS+S  + F
Subjt:  VTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRA-NPAVRVADGMRLLLRRRSTDVSASSSSQARNF

Query:  AASST
          S+T
Subjt:  AASST

AT4G14819.1 Protein of unknown function (DUF1677)1.3e-2963.46Show/hide
Query:  VTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSSSQARNFA
        VTCECCGL EDCTQ YI++VKA F GKWLCGLCSEAV DE +RS+     ++EAV+AHMSFC KF ANPA  VADGMR +LRRRS ++S   S   + F 
Subjt:  VTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSSSQARNFA

Query:  ASST
         S+T
Subjt:  ASST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAACGGAGGTGGTTGTCACGTGCGAATGCTGTGGCCTGAAAGAGGACTGCACCCAATCCTACATCACCGAAGTGAAGGCCAAGTTCGAAGGGAAATGGCTCTG
TGGCCTTTGCTCCGAAGCTGTCAGAGACGAAGCTACCCGAAGCAACAACCCACTGCCAGGTTTGGACGAGGCTGTCAGTGCCCACATGTCGTTTTGCCGTAAATTCAGAG
CCAACCCTGCGGTTCGTGTCGCTGACGGAATGAGGCTCCTGCTTCGGAGGAGATCCACCGACGTGTCGGCTTCTTCTTCTTCGCAGGCTCGGAACTTCGCTGCATCGTCC
ACCGCGTCGCAGGTGGGTTTCGACATGTCGTCGCTGTCCACCTTCTACTGA
mRNA sequenceShow/hide mRNA sequence
CCAAAATTTAGAGCTTATAATTTTCATTAATGATGGAAACGGAGGTGGTTGTCACGTGCGAATGCTGTGGCCTGAAAGAGGACTGCACCCAATCCTACATCACCGAAGTG
AAGGCCAAGTTCGAAGGGAAATGGCTCTGTGGCCTTTGCTCCGAAGCTGTCAGAGACGAAGCTACCCGAAGCAACAACCCACTGCCAGGTTTGGACGAGGCTGTCAGTGC
CCACATGTCGTTTTGCCGTAAATTCAGAGCCAACCCTGCGGTTCGTGTCGCTGACGGAATGAGGCTCCTGCTTCGGAGGAGATCCACCGACGTGTCGGCTTCTTCTTCTT
CGCAGGCTCGGAACTTCGCTGCATCGTCCACCGCGTCGCAGGTGGGTTTCGACATGTCGTCGCTGTCCACCTTCTACTGATTTTTTTTTTTTAGAAATTTGGTTTGTTAA
TTAAGTATTGACCAATAATTAAAGTTTCGGC
Protein sequenceShow/hide protein sequence
MMETEVVVTCECCGLKEDCTQSYITEVKAKFEGKWLCGLCSEAVRDEATRSNNPLPGLDEAVSAHMSFCRKFRANPAVRVADGMRLLLRRRSTDVSASSSSQARNFAASS
TASQVGFDMSSLSTFY