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Sed0001954 (gene) of Chayote v1 genome

Gene IDSed0001954
OrganismSechium edule (Chayote v1)
DescriptionGlycoprotein membrane precursor GPI-anchored
Genome locationLG11:2957474..2959090
RNA-Seq ExpressionSed0001954
SyntenySed0001954
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599253.1 putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3451.83Show/hide
Query:  SLVAVFAIAFLFFLSTSVHSRE------GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTA
        S+  VFAIAFLFF S  +   E      G NSYRQAQNL PL  N  ADCIA +IA+D    Q CA   AK   V S PSQITKF ++AEKCKV+INTT 
Subjt:  SLVAVFAIAFLFFLSTSVHSRE------GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTA

Query:  DAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVRL
        DA+VMP CVP++VQTL                  FVGAG+G ED W+VV+LTT A  G F GS   S+ AS+ G VA        G+FVRL
Subjt:  DAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVRL

XP_008454814.1 PREDICTED: uncharacterized GPI-anchored protein At3g06035 [Cucumis melo]5.2e-3653.97Show/hide
Query:  SLVAVFAIAFLFFLSTSVHSRE-----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTAD
        S+  VF IA LFF        E     G NSYRQAQNL PL+ N  ADCIAN++A D+A  Q CA    K   VAS PSQITKFP++AEKCKV+INTTAD
Subjt:  SLVAVFAIAFLFFLSTSVHSRE-----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTAD

Query:  AVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVR
        AVVMP CVP++VQTL                  FVGAGLGKED W+VV+LTT   AG F GS AGS+  SI G    V      GD VR
Subjt:  AVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVR

XP_022150744.1 uncharacterized GPI-anchored protein At3g06035 [Momordica charantia]3.8e-3454.14Show/hide
Query:  MASSSLVA---VFAIAFLFFLSTSVHSR-------EGQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKC
        MASSS  A   + AIAFL F S  V S+       +G NSYRQAQNL PL  N  ADCIAN+IA D+A  Q C+   AK   VAS PSQ+TKF ++AEKC
Subjt:  MASSSLVA---VFAIAFLFFLSTSVHSR-------EGQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKC

Query:  KVEINTTADAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIG
        KV++N+TADAV MP CVP++VQTL                  FVGAGLGKED W+VV+LTT  P G FAGS A S+  S+G
Subjt:  KVEINTTADAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIG

XP_022946761.1 uncharacterized GPI-anchored protein At3g06035 [Cucurbita moschata]2.9e-3451.83Show/hide
Query:  SLVAVFAIAFLFFLSTSVHSRE------GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTA
        S+  VFAIAFLFF S  +   E      G NSYRQAQNL PL  N  ADCIA +IA+D    Q CA   AK   V S PSQITKF ++AEKCKV+INTT 
Subjt:  SLVAVFAIAFLFFLSTSVHSRE------GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTA

Query:  DAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVRL
        DA+VMP CVP++VQTL                  FVGAG+G ED W+VV+LTT A  G F GS   S+ AS+ G VA        G+FVRL
Subjt:  DAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVRL

XP_022999135.1 uncharacterized GPI-anchored protein At3g06035-like [Cucurbita maxima]1.2e-3551.79Show/hide
Query:  MASSSLVAVFAIAFLFFLSTSVHSRE------GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEI
        ++S S+  VFAIAFLFF S  +   E      G NSYRQAQNL PL  N  ADCIA++IA+D    Q CA   AK   V S PSQITKF ++AEKCKV+I
Subjt:  MASSSLVAVFAIAFLFFLSTSVHSRE------GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEI

Query:  NTTADAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVRL
        NTT DA+VMP CVP++VQTL                  FVGAG+G ED W+VV+LTT A  G F GS  GS+ AS+ G VA        GDF RL
Subjt:  NTTADAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVRL

TrEMBL top hitse value%identityAlignment
A0A1S3C074 uncharacterized GPI-anchored protein At3g060352.5e-3653.97Show/hide
Query:  SLVAVFAIAFLFFLSTSVHSRE-----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTAD
        S+  VF IA LFF        E     G NSYRQAQNL PL+ N  ADCIAN++A D+A  Q CA    K   VAS PSQITKFP++AEKCKV+INTTAD
Subjt:  SLVAVFAIAFLFFLSTSVHSRE-----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTAD

Query:  AVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVR
        AVVMP CVP++VQTL                  FVGAGLGKED W+VV+LTT   AG F GS AGS+  SI G    V      GD VR
Subjt:  AVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVR

A0A5A7U3D6 Putative GPI-anchored protein2.5e-3653.97Show/hide
Query:  SLVAVFAIAFLFFLSTSVHSRE-----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTAD
        S+  VF IA LFF        E     G NSYRQAQNL PL+ N  ADCIAN++A D+A  Q CA    K   VAS PSQITKFP++AEKCKV+INTTAD
Subjt:  SLVAVFAIAFLFFLSTSVHSRE-----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTAD

Query:  AVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVR
        AVVMP CVP++VQTL                  FVGAGLGKED W+VV+LTT   AG F GS AGS+  SI G    V      GD VR
Subjt:  AVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVR

A0A6J1G4I7 uncharacterized GPI-anchored protein At3g060351.4e-3451.83Show/hide
Query:  SLVAVFAIAFLFFLSTSVHSRE------GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTA
        S+  VFAIAFLFF S  +   E      G NSYRQAQNL PL  N  ADCIA +IA+D    Q CA   AK   V S PSQITKF ++AEKCKV+INTT 
Subjt:  SLVAVFAIAFLFFLSTSVHSRE------GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTA

Query:  DAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVRL
        DA+VMP CVP++VQTL                  FVGAG+G ED W+VV+LTT A  G F GS   S+ AS+ G VA        G+FVRL
Subjt:  DAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVRL

A0A6J1KEG4 uncharacterized GPI-anchored protein At3g06035-like5.7e-3651.79Show/hide
Query:  MASSSLVAVFAIAFLFFLSTSVHSRE------GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEI
        ++S S+  VFAIAFLFF S  +   E      G NSYRQAQNL PL  N  ADCIA++IA+D    Q CA   AK   V S PSQITKF ++AEKCKV+I
Subjt:  MASSSLVAVFAIAFLFFLSTSVHSRE------GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEI

Query:  NTTADAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVRL
        NTT DA+VMP CVP++VQTL                  FVGAG+G ED W+VV+LTT A  G F GS  GS+ AS+ G VA        GDF RL
Subjt:  NTTADAVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVRL

A6YTC7 GPI-anchored protein-like protein II2.5e-3653.97Show/hide
Query:  SLVAVFAIAFLFFLSTSVHSRE-----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTAD
        S+  VF IA LFF        E     G NSYRQAQNL PL+ N  ADCIAN++A D+A  Q CA    K   VAS PSQITKFP++AEKCKV+INTTAD
Subjt:  SLVAVFAIAFLFFLSTSVHSRE-----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTAD

Query:  AVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVR
        AVVMP CVP++VQTL                  FVGAGLGKED W+VV+LTT   AG F GS AGS+  SI G    V      GD VR
Subjt:  AVVMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARV---FYFGDFVR

SwissProt top hitse value%identityAlignment
P59833 Uncharacterized GPI-anchored protein At5g192503.1e-1531.11Show/hide
Query:  LVAVFAIAFLFFLSTSVHSRE----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAV
        L++VF       LS +    +    G NSYR + NL  LI+N NA+C+A++IA D+   Q C +     +   ++P      PN   KC++    T D  
Subjt:  LVAVFAIAFLFFLSTSVHSRE----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAV

Query:  VMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFA-GSRAGSVAASIGGSVARVFYF
        ++PACVP +  +L                  F G G+G +D W+VV+LTT+ P G ++  S +G+ A  + G V+    F
Subjt:  VMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFA-GSRAGSVAASIGGSVARVFYF

Q84MC0 Uncharacterized GPI-anchored protein At3g060356.3e-1636.84Show/hide
Query:  GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPEMVQTL------------
        G NSYR  QNL  L  NENA+C+A++IA D+   + C +     T   + P Q   +P    KC + ++ T D  +MPACVP +   L            
Subjt:  GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPEMVQTL------------

Query:  ------FVGAGLGKEDGWVVVILTTAAPAGEFA
              F G G+GKED W+VV+LTT  P G ++
Subjt:  ------FVGAGLGKEDGWVVVILTTAAPAGEFA

Q84VZ5 Uncharacterized GPI-anchored protein At5g192401.0e-1030.07Show/hide
Query:  NSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPE-----------------MV
        N YR++ NL  L  N+NA+C+A+++  D+   Q C +     +   + P  I  FPN   KC++  N T D +++  C P+                 + 
Subjt:  NSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPE-----------------MV

Query:  QTLFVGAGLG-KEDG-WVVVILTTAAPAGEFAGSRAGSVAASIGGSVARVFYF
         + F GAG+G   DG W+V +LTT  P G +  S +G+ A  + G V+    F
Subjt:  QTLFVGAGLG-KEDG-WVVVILTTAAPAGEFAGSRAGSVAASIGGSVARVFYF

Q8GUL8 Uncharacterized GPI-anchored protein At5g192301.8e-0728.57Show/hide
Query:  NSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPE-----------------MV
        N YR   NL+ L  NENA+C+A+++  D+   Q C +         ++ S      N   KC +      D V+M  C P+                 + 
Subjt:  NSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPE-----------------MV

Query:  QTLFVGAGLGKEDGWVVVILTTAAPAGEFA---GSRAGSVAASIGGSVARVFYF
         +   G G+G  D WVVVILTT  P G ++    + +G+ A  + G V+  F F
Subjt:  QTLFVGAGLGKEDGWVVVILTTAAPAGEFA---GSRAGSVAASIGGSVARVFYF

Arabidopsis top hitse value%identityAlignment
AT1G54860.1 Glycoprotein membrane precursor GPI-anchored1.6e-1935.62Show/hide
Query:  EGQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASS-PSQITKFPNFAEKCKVEINTTADAVVMPACVPEMVQTL----------
        +G NSYR AQ + P   NE ADC+A++IA D+   Q C +     T    S P ++T + +   +CK++ NTT D +++P C+P  + TL          
Subjt:  EGQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASS-PSQITKFPNFAEKCKVEINTTADAVVMPACVPEMVQTL----------

Query:  --------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASI
                +VGAG+G E  W+VV+LTT+ P G F    A   A S+
Subjt:  --------FVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASI

AT3G06035.1 Glycoprotein membrane precursor GPI-anchored4.4e-1736.84Show/hide
Query:  GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPEMVQTL------------
        G NSYR  QNL  L  NENA+C+A++IA D+   + C +     T   + P Q   +P    KC + ++ T D  +MPACVP +   L            
Subjt:  GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPEMVQTL------------

Query:  ------FVGAGLGKEDGWVVVILTTAAPAGEFA
              F G G+GKED W+VV+LTT  P G ++
Subjt:  ------FVGAGLGKEDGWVVVILTTAAPAGEFA

AT5G19230.1 Glycoprotein membrane precursor GPI-anchored1.3e-0828.57Show/hide
Query:  NSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPE-----------------MV
        N YR   NL+ L  NENA+C+A+++  D+   Q C +         ++ S      N   KC +      D V+M  C P+                 + 
Subjt:  NSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPE-----------------MV

Query:  QTLFVGAGLGKEDGWVVVILTTAAPAGEFA---GSRAGSVAASIGGSVARVFYF
         +   G G+G  D WVVVILTT  P G ++    + +G+ A  + G V+  F F
Subjt:  QTLFVGAGLGKEDGWVVVILTTAAPAGEFA---GSRAGSVAASIGGSVARVFYF

AT5G19240.1 Glycoprotein membrane precursor GPI-anchored7.3e-1230.07Show/hide
Query:  NSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPE-----------------MV
        N YR++ NL  L  N+NA+C+A+++  D+   Q C +     +   + P  I  FPN   KC++  N T D +++  C P+                 + 
Subjt:  NSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPE-----------------MV

Query:  QTLFVGAGLG-KEDG-WVVVILTTAAPAGEFAGSRAGSVAASIGGSVARVFYF
         + F GAG+G   DG W+V +LTT  P G +  S +G+ A  + G V+    F
Subjt:  QTLFVGAGLG-KEDG-WVVVILTTAAPAGEFAGSRAGSVAASIGGSVARVFYF

AT5G19250.1 Glycoprotein membrane precursor GPI-anchored2.2e-1631.11Show/hide
Query:  LVAVFAIAFLFFLSTSVHSRE----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAV
        L++VF       LS +    +    G NSYR + NL  LI+N NA+C+A++IA D+   Q C +     +   ++P      PN   KC++    T D  
Subjt:  LVAVFAIAFLFFLSTSVHSRE----GQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAV

Query:  VMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFA-GSRAGSVAASIGGSVARVFYF
        ++PACVP +  +L                  F G G+G +D W+VV+LTT+ P G ++  S +G+ A  + G V+    F
Subjt:  VMPACVPEMVQTL------------------FVGAGLGKEDGWVVVILTTAAPAGEFA-GSRAGSVAASIGGSVARVFYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTTCTCTTGTTGCTGTTTTCGCCATTGCATTTCTCTTCTTCTTATCCACTTCTGTTCACTCCAGAGAAGGGCAAAACAGCTACAGACAAGCACAGAATCT
CCAGCCGCTCATAAATAACGAAAATGCCGACTGCATCGCCAACAAAATCGCCAACGACGAAGCCGGGACCCAGATCTGCGCCGATATCGCCGCCAAACCAACCGCCGTTG
CAAGCAGCCCGTCGCAGATAACGAAGTTCCCGAATTTCGCCGAGAAATGCAAGGTCGAAATCAATACCACCGCCGACGCTGTCGTGATGCCGGCGTGCGTGCCGGAGATG
GTCCAGACTCTGTTCGTCGGCGCCGGACTCGGCAAGGAGGACGGGTGGGTGGTGGTGATTCTGACCACCGCCGCACCCGCCGGGGAATTTGCCGGCTCCAGAGCTGGGTC
GGTGGCGGCTTCGATTGGGGGATCAGTGGCTAGGGTTTTTTATTTTGGGGATTTTGTGAGATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCTTCTCTTGTTGCTGTTTTCGCCATTGCATTTCTCTTCTTCTTATCCACTTCTGTTCACTCCAGAGAAGGGCAAAACAGCTACAGACAAGCACAGAATCT
CCAGCCGCTCATAAATAACGAAAATGCCGACTGCATCGCCAACAAAATCGCCAACGACGAAGCCGGGACCCAGATCTGCGCCGATATCGCCGCCAAACCAACCGCCGTTG
CAAGCAGCCCGTCGCAGATAACGAAGTTCCCGAATTTCGCCGAGAAATGCAAGGTCGAAATCAATACCACCGCCGACGCTGTCGTGATGCCGGCGTGCGTGCCGGAGATG
GTCCAGACTCTGTTCGTCGGCGCCGGACTCGGCAAGGAGGACGGGTGGGTGGTGGTGATTCTGACCACCGCCGCACCCGCCGGGGAATTTGCCGGCTCCAGAGCTGGGTC
GGTGGCGGCTTCGATTGGGGGATCAGTGGCTAGGGTTTTTTATTTTGGGGATTTTGTGAGATTGTGA
Protein sequenceShow/hide protein sequence
MASSSLVAVFAIAFLFFLSTSVHSREGQNSYRQAQNLQPLINNENADCIANKIANDEAGTQICADIAAKPTAVASSPSQITKFPNFAEKCKVEINTTADAVVMPACVPEM
VQTLFVGAGLGKEDGWVVVILTTAAPAGEFAGSRAGSVAASIGGSVARVFYFGDFVRL