CuGenDBv2

Gene ID	Sed0001958
Organism	Sechium edule (Chayote v1)
Description	HMA domain-containing protein
Genome location	LG06:5085101..5089453
RNA-Seq Expression	Sed0001958
Synteny	Sed0001958
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR006121 - Heavy metal-associated domain, HMA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581006.1 hypothetical protein SDJN03_21008, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-54

72.04

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Query:  MASISTFPTLHSISGPA----TSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDM
        MASIS FP LHS+S PA    + I+RPS +L +S++F VSAASFR+S+V+ R R R LK++  VEED AS+PEQGVE EA SPS      VTV VS SD+
Subjt:  MASISTFPTLHSISGPA----TSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDM

Query:  LTMFFQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        LTMFFQAEG LNE+AVPSVTEALEQT+GITGLKV++VEGIASVEL KQTT+QSTGVASSLIE IQG GFKLQTLNLSFE KEEVFV
Subjt:  LTMFFQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

KAG7015253.1 hypothetical protein SDJN02_22887 [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-53

74.18

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Query:  MASISTFPTLHSISGPATS------ITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMF
        MASISTFP  HSIS PAT+      I R SISLHTS+NFAVSAASFR+S+V    + R LKK  AVE + ASVPEQ VE E  +P+VTVSVSPSDMLTMF
Subjt:  MASISTFPTLHSISGPATS------ITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMF

Query:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        FQAEG LNE+A+PSVTEALEQTEG T LKV+VVEGIASVEL KQ T+QSTGVASSLIE IQ  GFKLQTLNLSFE  EEVFV
Subjt:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

XP_022983877.1 uncharacterized protein LOC111482359 [Cucurbita maxima]

9.0e-55

72.04

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Query:  MASISTFPTLHSISGPA----TSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDM
        MASIS FP LHS+S PA    + I RPS +L +S++F VSAA+FR+S+ + R RPR LK++  VEED AS+PEQG E EAPSPS      VTV VS SD+
Subjt:  MASISTFPTLHSISGPA----TSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDM

Query:  LTMFFQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        LTMFFQAEG LNE+AVPSVTEALEQT+GITGLKV++VEGIASVEL KQTT+QSTGVASSLIEIIQG GFKLQTLNLSFE KEEVFV
Subjt:  LTMFFQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

XP_023526965.1 uncharacterized protein LOC111790332 [Cucurbita pepo subsp. pepo]

4.0e-55

72.04

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Query:  MASISTFPTLHSISGPA----TSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDM
        MASIS FP LHSIS PA    + I+RP  +L +S++F VSAASFR+S+V+ R RPR LK+   VEED AS+PEQGVE E PSPS      VTV VS SD+
Subjt:  MASISTFPTLHSISGPA----TSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDM

Query:  LTMFFQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        LTMFFQAEG LNE+AVPSVTEALEQT+GITGLKV++VEGIASVEL KQTT+QSTGVASSLIE IQG GFKLQTLNLSFE KEEVF+
Subjt:  LTMFFQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

XP_023529800.1 uncharacterized protein LOC111792515 [Cucurbita pepo subsp. pepo]

5.8e-54

73.63

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Query:  MASISTFPTLHSISGPATS------ITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMF
        MASISTFP  HSIS PAT+      + R SISLHTS NFA SAASFR+S+V    +PR LK   AVE + ASVPEQ VE E P P+VTVSVSPSDMLTMF
Subjt:  MASISTFPTLHSISGPATS------ITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMF

Query:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        FQAEG LNE+A+PSVTEALEQTEG T LKV+VVEGIASVEL KQ T+QSTGVASSLIE IQ  GFKLQTLNLSFE  EEVFV
Subjt:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

TrEMBL top hits

e value

%identity

Alignment

A0A5D3D1F9 Heavy-metal-associated domain-containing protein

2.4e-53

72.53

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Query:  MASISTFPTLHSISGPATSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDMLTMF
        MASISTFP LH     ++ + R S SL +S NF +SAASFR+S VQ R  PR LK++ AVEED ASVPE GVETEA SPS      VTV VSPSD+LTMF
Subjt:  MASISTFPTLHSISGPATSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDMLTMF

Query:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        FQAEG LNE+A+PSVTEALEQTEGITGLKV+V EGIASV L KQTT+QSTGVASSLIE IQG GFKLQTLNLSFE +EEVFV
Subjt:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

A0A6J1ERV9 uncharacterized protein LOC111435303

1.1e-53

73.63

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Query:  MASISTFPTLHSISGPATS------ITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMF
        MASISTFP  HS+S PAT+      I R SISLHTS+NFAVSAASFR+S+V    + R LKK  AVE + ASVPEQ VE E  +P+VTVSVSPSDMLTMF
Subjt:  MASISTFPTLHSISGPATS------ITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMF

Query:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        FQAEG LNE+A+PSVTEALEQTEG T LKV+VVEGIASVEL KQ T+QSTGVASSLIE IQ  GFKLQTLNLSFE  EEVFV
Subjt:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

A0A6J1F3X5 uncharacterized protein LOC111441946

8.2e-54

71.51

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Query:  MASISTFPTLHSISGPA----TSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDM
        MASIS FP LHS+S PA    + I+RPS +L +S++F VSAASF +S+V+ R R R LK++  VEED AS+PEQGVE EA SPS      VTV VS SD+
Subjt:  MASISTFPTLHSISGPA----TSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDM

Query:  LTMFFQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        LTMFFQAEG LNE+AVPSVTEALEQT+GITGLKV++VEGIASVEL KQTT+QSTGVASSLIE IQG GFKLQTLNLSFE KEEVFV
Subjt:  LTMFFQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

A0A6J1J0J2 uncharacterized protein LOC111482359

4.4e-55

72.04

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Query:  MASISTFPTLHSISGPA----TSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDM
        MASIS FP LHS+S PA    + I RPS +L +S++F VSAA+FR+S+ + R RPR LK++  VEED AS+PEQG E EAPSPS      VTV VS SD+
Subjt:  MASISTFPTLHSISGPA----TSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPS------VTVSVSPSDM

Query:  LTMFFQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        LTMFFQAEG LNE+AVPSVTEALEQT+GITGLKV++VEGIASVEL KQTT+QSTGVASSLIEIIQG GFKLQTLNLSFE KEEVFV
Subjt:  LTMFFQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

A0A6J1JF03 uncharacterized protein LOC111486304

1.4e-53

72.53

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Query:  MASISTFPTLHSISGPATS------ITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMF
        MASISTFP  HSIS PAT+      + R SISLHTS NFA +AA+FR+S+V    +PR L+K  AVE + ASVPEQ VE E P P+VTVSVSPSDMLTMF
Subjt:  MASISTFPTLHSISGPATS------ITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMF

Query:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        FQAEG LNE+A+PSVTEALEQTEG T LKV+VVEGIASVEL KQ T+QSTGVASSLIE IQ  GFKLQTLNLSFE  EEVFV
Subjt:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G14910.1 Heavy metal transport/detoxification superfamily protein

2.9e-35

52.2

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Query:  MASISTFPTLHSI---SGPATSITRPSISLHTSANFAVSA-ASFRNSSVQARIRPRR--LKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMF
        MASI+   T HS      P  S T   + L  + NF   A  + RN S    I+  R  L+KL+++ E G  V    V  E P  +V+V VSPSDMLTMF
Subjt:  MASISTFPTLHSI---SGPATSITRPSISLHTSANFAVSA-ASFRNSSVQARIRPRR--LKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMF

Query:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV
        FQA+G LNEAA+P+VT AL+  +G++ LKV+V EG+A VEL+KQTT+Q+TGVAS+L+E IQG GFKLQTLNLSFE  +EV V
Subjt:  FQAEGALNEAAVPSVTEALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

Sequences

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CDS sequence

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ATGGCTTCAATCTCCACCTTCCCCACGCTTCACTCCATTTCTGGACCTGCAACTTCCATTACCAGACCTTCAATTTCTCTTCACACCTCCGCCAACTTCGCCGTCTCCGC
CGCCTCCTTCCGGAATTCGTCGGTTCAGGCCCGGATTCGGCCACGCCGCTTGAAAAAACTGAACGCCGTCGAAGAAGATGGGGCTTCTGTTCCGGAGCAAGGAGTCGAAA
CCGAAGCGCCGTCGCCGTCGGTCACCGTCTCCGTCTCGCCATCTGATATGCTCACCATGTTCTTTCAGGCAGAGGGGGCTCTAAATGAAGCAGCTGTTCCTTCTGTAACT
GAAGCTTTGGAGCAAACTGAGGGCATCACTGGATTGAAGGTTGAAGTTGTTGAGGGCATTGCATCTGTTGAGCTTATGAAACAAACAACAATGCAATCGACAGGAGTGGC
CTCGAGCTTGATCGAGATCATTCAGGGTGTAGGTTTCAAGTTACAAACGTTAAATCTGAGCTTTGAGGGCAAGGAAGAAGTTTTTGTTTAG

mRNA sequence

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ATTTTCTAAAAAATATTCATAGATTTAATTTTCTATGTAACATTTTCCCAATATATATATATTATTTCTCAACAGTTATTTATTGGGATAAGAAGATAGAAACCCAAAAC
ACTCGAACTTCACATACAAGAAAACAATGGCTTCAATCTCCACCTTCCCCACGCTTCACTCCATTTCTGGACCTGCAACTTCCATTACCAGACCTTCAATTTCTCTTCAC
ACCTCCGCCAACTTCGCCGTCTCCGCCGCCTCCTTCCGGAATTCGTCGGTTCAGGCCCGGATTCGGCCACGCCGCTTGAAAAAACTGAACGCCGTCGAAGAAGATGGGGC
TTCTGTTCCGGAGCAAGGAGTCGAAACCGAAGCGCCGTCGCCGTCGGTCACCGTCTCCGTCTCGCCATCTGATATGCTCACCATGTTCTTTCAGGCAGAGGGGGCTCTAA
ATGAAGCAGCTGTTCCTTCTGTAACTGAAGCTTTGGAGCAAACTGAGGGCATCACTGGATTGAAGGTTGAAGTTGTTGAGGGCATTGCATCTGTTGAGCTTATGAAACAA
ACAACAATGCAATCGACAGGAGTGGCCTCGAGCTTGATCGAGATCATTCAGGGTGTAGGTTTCAAGTTACAAACGTTAAATCTGAGCTTTGAGGGCAAGGAAGAAGTTTT
TGTTTAGGTACACTCTTGATATTGAATTGTTAGAAATGGAGAAAAGGAAGGCTATTTAAGAGCTCCATTGCTGATGTCATGGAAGGTTGGATTGTGGAGATGGTGAAAAC
CTAAACTCAAATGCCCACGAAGTGCTTGTATGTATCAGGTTTGATGAGATTATTATTTGTGCCATGGTTTTATTTATTTATTTTTTGTGTGTATGAGATGTGGGGTTGAA
ATTTGTTAGTTGGTATAATTAAAGTTACTTCAACCCATCAACTTAAGCAAGTTGATGGGTGATCTAATATAATGCATCAAAGTTTTAGGATAGAGAAGTGGAAAGCCATT
AATTGTAATCAGTCCTTTTTCTTGCATGGCCTTAGAAATTTGGATGAAAACAATTAAAAATAGTGTTGTGGAGGAAGAAATCTAGGGATGTATAAAAAAATGACAAATTC
AAGCAATCTAAACTACCCAACTCAAACCGTAAGGGTTGAGTTGGGTTATAATTTTTTTGGTATTGGATCGGGTTATGATTTTATAATTTTCGTTGGTTTGTGTGTAAGAT
TAATTCACAAGATTGTGCATGTAAGATAGGTAACCTAGATTTAAATATAGTACCATGCATTT

Protein sequence

Show/hide protein sequence

MASISTFPTLHSISGPATSITRPSISLHTSANFAVSAASFRNSSVQARIRPRRLKKLNAVEEDGASVPEQGVETEAPSPSVTVSVSPSDMLTMFFQAEGALNEAAVPSVT
EALEQTEGITGLKVEVVEGIASVELMKQTTMQSTGVASSLIEIIQGVGFKLQTLNLSFEGKEEVFV

Sed0001958 (gene) of Chayote v1 genome