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Sed0001965 (gene) of Chayote v1 genome

Gene IDSed0001965
OrganismSechium edule (Chayote v1)
DescriptionABC transporter A family protein
Genome locationLG01:63543570..63545447
RNA-Seq ExpressionSed0001965
SyntenySed0001965
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016796.1 hypothetical protein SDJN02_21907, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-2181.16Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ
        MGYV+RVR ASFFAGAAVAS LG +LLQ DYK+AYDSISQK+GGLHDS+ESRI ALEKLN ND SQH Q
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ

KAG7035773.1 hypothetical protein SDJN02_02571, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2181.16Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ
        MGY++RVR ASFFAGAAVAS LGF++LQ DYK+AYDSISQK+GGLHDSLESRI ALEKLN ND SQH Q
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ

XP_022138131.1 uncharacterized protein LOC111009377 [Momordica charantia]2.9e-2181.43Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQT
        MGYV+RVR ASFFAGAAVAS LG +LLQ DYK+AYDSISQK+GGLHDSLESRI ALEKLN ND SQH  T
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQT

XP_022974358.1 uncharacterized protein LOC111472986 [Cucurbita maxima]4.9e-2181.16Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ
        MGYV+RVR ASFFAGAAVAS LG +LLQ DYK+AYDSISQK+GGLHDS+ESRI ALEKLN ND SQH Q
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ

XP_023551615.1 uncharacterized protein LOC111809395 [Cucurbita pepo subsp. pepo]4.9e-2181.16Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ
        MGYV+RVR ASFFAGAAVAS LG +LLQ DYK+AYDSISQK+GGLHDS+ESRI ALEKLN ND SQH Q
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ

TrEMBL top hitse value%identityAlignment
A0A0A0KJB2 Uncharacterized protein2.6e-2079.71Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ
        MGYV+RVR ASFFAGAAVAS LG +LLQ DYK+AYDSIS K+GGLHDSL SRI ALEKLN ND+SQH Q
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ

A0A1S3AUK7 uncharacterized protein LOC1034830084.5e-2078.26Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ
        MGYV+RVR ASFFAGAAVAS LG +LLQ DYK+AYDSIS K+GGLHDS+ SRI ALEKLN ND SQH Q
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ

A0A6J1C8U6 uncharacterized protein LOC1110093771.4e-2181.43Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQT
        MGYV+RVR ASFFAGAAVAS LG +LLQ DYK+AYDSISQK+GGLHDSLESRI ALEKLN ND SQH  T
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQT

A0A6J1E8L7 uncharacterized protein LOC1114303976.9e-2179.71Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ
        MGYV+RVR ASFF GAAVAS LG +LLQ DYK+AYDSISQK+GGLHDS+ESRI ALEKLN ND SQH Q
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ

A0A6J1IFZ7 uncharacterized protein LOC1114729862.4e-2181.16Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ
        MGYV+RVR ASFFAGAAVAS LG +LLQ DYK+AYDSISQK+GGLHDS+ESRI ALEKLN ND SQH Q
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53650.1 unknown protein1.5e-1558.57Show/hide
Query:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQT
        MGYV RVR ASFFAGAA ASF+G  +L  DYK+A++SISQ+    HDSL+ RI  LE L  ++A Q A+T
Subjt:  MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTATGTGGTGAGAGTGAGATCGGCTTCGTTCTTCGCCGGAGCAGCGGTTGCATCGTTTCTAGGGTTTCACCTTCTTCAGTCAGATTACAAATTGGCTTACGATTC
CATTTCGCAAAAGTTGGGAGGGCTGCATGATTCTCTGGAGAGTAGAATTTTGGCTCTGGAGAAGCTGAACCACAATGATGCTTCCCAACATGCTCAAACAGGAGTGGAGA
AAGCCAGGACTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTATGTGGTGAGAGTGAGATCGGCTTCGTTCTTCGCCGGAGCAGCGGTTGCATCGTTTCTAGGGTTTCACCTTCTTCAGTCAGATTACAAATTGGCTTACGATTC
CATTTCGCAAAAGTTGGGAGGGCTGCATGATTCTCTGGAGAGTAGAATTTTGGCTCTGGAGAAGCTGAACCACAATGATGCTTCCCAACATGCTCAAACAGGAGTGGAGA
AAGCCAGGACTGTCTGA
Protein sequenceShow/hide protein sequence
MGYVVRVRSASFFAGAAVASFLGFHLLQSDYKLAYDSISQKLGGLHDSLESRILALEKLNHNDASQHAQTGVEKARTV