; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001966 (gene) of Chayote v1 genome

Gene IDSed0001966
OrganismSechium edule (Chayote v1)
DescriptionS-protein homolog
Genome locationLG14:23647914..23648291
RNA-Seq ExpressionSed0001966
SyntenySed0001966
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052584.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]1.2e-4871.9Show/hide
Query:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD
        S  MPP S WKVVVFNQLS GQ+L+++CKSKDNDLG+H LR  EK+SW FKENLF+TTRFWC+L +SS K VTMDVFWPE+H WLA RCN+ +C+WVAQD
Subjt:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD

Query:  DGIYLVNVPKDVREFVLKWDN
        DGIY+VNV  ++REFV KWDN
Subjt:  DGIYLVNVPKDVREFVLKWDN

KAE8647731.1 hypothetical protein Csa_003821 [Cucumis sativus]3.9e-4466.94Show/hide
Query:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD
        S  M PLSRWKVV+F+QL+ G+ L ++CKSKDNDLG+H L+ ++ +SW FKENLF+TT FWCTL TSS K+VTMDVFWPE+H WLA RC++ +C+WVAQD
Subjt:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD

Query:  DGIYLVNVPKDVREFVLKWDN
        DGIYLVN  K+ REFV KWD+
Subjt:  DGIYLVNVPKDVREFVLKWDN

KAG2712058.1 hypothetical protein I3760_04G107600 [Carya illinoinensis]1.1e-2748.7Show/hide
Query:  LSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGIYLV
        L +  V V N LS  Q+L L+CKS+D+DLG H L   ++YSW+F+ N  ATT FWC ++TS+      DVFWP K  WL+ RCN ++C+W A+DDGIYL 
Subjt:  LSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGIYLV

Query:  NVPKDVREFVLKWDN
        N+P++  E + KW++
Subjt:  NVPKDVREFVLKWDN

KAG7034676.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-4369.3Show/hide
Query:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD
        S  MPPLSRWKVV+FNQL+ GQTL  +CKSK++DLGDHLL+  E+YSW FKEN+ +TTRFWCT  TS NK++ MDVFWPE H WLA RCN  SCVWVAQD
Subjt:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD

Query:  DGIYLVNVPKDVRE
        DG+YL N+P+  RE
Subjt:  DGIYLVNVPKDVRE

XP_042977762.1 S-protein homolog 1-like [Carya illinoinensis]1.1e-2748.7Show/hide
Query:  LSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGIYLV
        L +  V V N LS  Q+L L+CKS+D+DLG H L   ++YSW+F+ N  ATT FWC ++TS+      DVFWP K  WL+ RCN ++C+W A+DDGIYL 
Subjt:  LSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGIYLV

Query:  NVPKDVREFVLKWDN
        N+P++  E + KW++
Subjt:  NVPKDVREFVLKWDN

TrEMBL top hitse value%identityAlignment
A0A5A7UB41 S-protein homolog5.7e-4971.9Show/hide
Query:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD
        S  MPP S WKVVVFNQLS GQ+L+++CKSKDNDLG+H LR  EK+SW FKENLF+TTRFWC+L +SS K VTMDVFWPE+H WLA RCN+ +C+WVAQD
Subjt:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD

Query:  DGIYLVNVPKDVREFVLKWDN
        DGIY+VNV  ++REFV KWDN
Subjt:  DGIYLVNVPKDVREFVLKWDN

A0A6J1CRU0 S-protein homolog1.4e-2645.97Show/hide
Query:  MVKPSSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHG-WLATRCNHESCV
        +++P      L +W++ V N LS+GQTL ++CKSKDNDLG+H L +  +++WTF+ NL+ TT FWC L     K  + DVFW EK   WL  RC H +C+
Subjt:  MVKPSSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHG-WLATRCNHESCV

Query:  WVAQDDGIYLVNVPKDVREFVLKW
        W A+DDGIYL + P      V +W
Subjt:  WVAQDDGIYLVNVPKDVREFVLKW

A0A6J1DEX4 S-protein homolog6.1e-2744.92Show/hide
Query:  PLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPE--KHGWLATRCNHESCVWVAQDDGI
        P+  W V + N+LS+GQ L ++CKSKD+DLG+H L +  +Y +TFK+N++ TT FWC L+   N     DV+W +  K  WL TRC++++C+W+A+ DGI
Subjt:  PLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPE--KHGWLATRCNHESCVWVAQDDGI

Query:  YLVNVPKDVREFVLKWDN
        Y+ N+P +  E V  W+N
Subjt:  YLVNVPKDVREFVLKWDN

A0A6J1ESA0 S-protein homolog8.0e-2748.39Show/hide
Query:  VKPSSGMP-PLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHG-WLATRCNHESCV
        VK S G P P   W+VV+ N  S  Q L+++CKS D+DLG H+++  + Y W FK NL+ +TRFWCT   S N  ++ DVFWPE    WL  RC + SC+
Subjt:  VKPSSGMP-PLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHG-WLATRCNHESCV

Query:  WVAQDDGIYLVNVPKDVREFVLKW
        WVA+D+GIYL N P++  E + KW
Subjt:  WVAQDDGIYLVNVPKDVREFVLKW

A0A6P4ABD6 S-protein homolog2.7e-2747.41Show/hide
Query:  PLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEK-HGWLATRCNHESCVWVAQDDGIY
        PL ++ + + N LSSG+ L ++C+SKD+DLG+H L     ++WTF+ N + TTRFWC  +   N+    DVFWPEK H WL TRC+++ C+W A+DDG Y
Subjt:  PLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEK-HGWLATRCNHESCVWVAQDDGIY

Query:  LVNVPKDVREFVLKWD
        L NVP +  E + KW+
Subjt:  LVNVPKDVREFVLKWD

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.2e-0829.9Show/hide
Query:  PLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDG
        P S+  V + N L +  TL  +CKSKD+DLG+  L+  E +S++F    F  T ++C+  +  N+  + D++   +      +C  + CVW  + +G
Subjt:  PLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDG

F4JLS0 S-protein homolog 15.3e-2037.61Show/hide
Query:  MPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGI
        +P +S W+V V N L++G+TL ++CKSK++DLG+  L+   ++SW F EN+  +T FWC +    N  + ++VFW +    L  RC  ++C+W A+ DG+
Subjt:  MPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGI

Query:  YLVNVPKDVREFVLKWD
        YL N          KW+
Subjt:  YLVNVPKDVREFVLKWD

O23020 S-protein homolog 52.1e-0830Show/hide
Query:  GMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDG
        G+PP  R  VV    L  G  L+++CKSK +DLG H++   ++Y + F+ NL+ +T F+C+ +  S  + + D++  ++   +      + C W  + DG
Subjt:  GMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDG

Q2HQ46 S-protein homolog 745.3e-2042.31Show/hide
Query:  MPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGI
        +P +S W+V V N L++G+TL ++CKSK+NDLGD  L+  +++SW F EN+  +T FWC + +  +  + + VFW +    L  RC+ ++CVW A++DG+
Subjt:  MPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGI

Query:  YLVN
        YL N
Subjt:  YLVN

Q40975 Self-incompatibility protein S11.2e-0829.81Show/hide
Query:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD
        SSG  P+   +V + N+  +G+++ ++C+SKDNDL +  + +    S++F+E+ F TT F+C L+     +     +  ++      RC+ + C+W   D
Subjt:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD

Query:  DGIY
        DG+Y
Subjt:  DGIY

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.5e-0930Show/hide
Query:  GMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDG
        G+PP  R  VV    L  G  L+++CKSK +DLG H++   ++Y + F+ NL+ +T F+C+ +  S  + + D++  ++   +      + C W  + DG
Subjt:  GMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDG

AT4G16195.1 Plant self-incompatibility protein S1 family8.7e-1029.9Show/hide
Query:  PLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDG
        P S+  V + N L +  TL  +CKSKD+DLG+  L+  E +S++F    F  T ++C+  +  N+  + D++   +      +C  + CVW  + +G
Subjt:  PLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDG

AT4G16295.1 S-protein homologue 13.8e-2137.61Show/hide
Query:  MPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGI
        +P +S W+V V N L++G+TL ++CKSK++DLG+  L+   ++SW F EN+  +T FWC +    N  + ++VFW +    L  RC  ++C+W A+ DG+
Subjt:  MPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGI

Query:  YLVNVPKDVREFVLKWD
        YL N          KW+
Subjt:  YLVNVPKDVREFVLKWD

AT4G29035.1 Plant self-incompatibility protein S1 family3.8e-2142.31Show/hide
Query:  MPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGI
        +P +S W+V V N L++G+TL ++CKSK+NDLGD  L+  +++SW F EN+  +T FWC + +  +  + + VFW +    L  RC+ ++CVW A++DG+
Subjt:  MPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGI

Query:  YLVN
        YL N
Subjt:  YLVN

AT5G04350.1 Plant self-incompatibility protein S1 family3.4e-1434.62Show/hide
Query:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD
        S+    +   KVV+ NQL   + L ++C+SKD+DLG+H+L+  + Y +TF +N++ TT F C +    N +  +D F   +  W  ++    SC W+ ++
Subjt:  SSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQD

Query:  DGIY
        DGIY
Subjt:  DGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAGCCATCTTCGGGTATGCCACCATTGAGTCGATGGAAGGTGGTGGTTTTTAACCAATTGAGTTCGGGTCAAACTCTATCTCTCAACTGCAAATCAAAAGATAA
CGATTTGGGCGATCATTTGCTACGAGCGAATGAGAAGTACTCGTGGACATTCAAGGAGAATTTGTTTGCAACCACTCGGTTTTGGTGTACTCTAAAAACCTCATCCAACA
AACAGGTGACCATGGATGTGTTTTGGCCCGAAAAACACGGTTGGCTTGCTACGAGATGCAACCATGAGTCGTGCGTTTGGGTTGCTCAAGATGATGGGATTTATTTGGTG
AACGTTCCTAAAGATGTACGAGAATTTGTGCTCAAATGGGACAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAGCCATCTTCGGGTATGCCACCATTGAGTCGATGGAAGGTGGTGGTTTTTAACCAATTGAGTTCGGGTCAAACTCTATCTCTCAACTGCAAATCAAAAGATAA
CGATTTGGGCGATCATTTGCTACGAGCGAATGAGAAGTACTCGTGGACATTCAAGGAGAATTTGTTTGCAACCACTCGGTTTTGGTGTACTCTAAAAACCTCATCCAACA
AACAGGTGACCATGGATGTGTTTTGGCCCGAAAAACACGGTTGGCTTGCTACGAGATGCAACCATGAGTCGTGCGTTTGGGTTGCTCAAGATGATGGGATTTATTTGGTG
AACGTTCCTAAAGATGTACGAGAATTTGTGCTCAAATGGGACAACTAG
Protein sequenceShow/hide protein sequence
MVKPSSGMPPLSRWKVVVFNQLSSGQTLSLNCKSKDNDLGDHLLRANEKYSWTFKENLFATTRFWCTLKTSSNKQVTMDVFWPEKHGWLATRCNHESCVWVAQDDGIYLV
NVPKDVREFVLKWDN