; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0001986 (gene) of Chayote v1 genome

Gene IDSed0001986
OrganismSechium edule (Chayote v1)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationLG07:14583241..14584750
RNA-Seq ExpressionSed0001986
SyntenySed0001986
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-10875.9Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCL
        MAGF+PLGGGR  N+H+PTTTT       TDGLFWY+NYES E+WQQQ  Q+Q GEGF YSG+ESPPRSSLVM+RSGR G GGQVISCQDCGNQAKKDCL
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCL

Query:  HMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKG
        HMRCRTCCKSRGF+CETHVKSTW+P SKRRER  R+   N KRPRD N AASSG EMGN PVEVSSTAVFRCVRMTTLDET+DQ+ YQTAVNIGGH FKG
Subjt:  HMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKG

Query:  ILYDHGPDHHHHQQQQ-----PPNSASPDGGALL---------SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
        ILYDHGP+    QQQQ     PPNSASPDGG LL          PPISAALLDP PPYP PL TY AAGTQFFLPPTS
Subjt:  ILYDHGPDHHHHQQQQ-----PPNSASPDGGALL---------SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

XP_022982329.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima]6.1e-10876.45Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCL
        MAGFFPLGGGR  N+H+PTTTT       TDGLFWY+NYES  +WQQQ  Q+Q GEGF YSG+ESPPRSSLVM+RSGR G GGQVISCQDCGNQAKKDCL
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCL

Query:  HMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKG
        HMRCRTCCKSRGF+CETHVKSTW+P SKRRER  R+   N KRPRD N AASSG EMGN P+EVSSTAVFRCVRMTTLDET+DQ+ YQTAVNIGGH FKG
Subjt:  HMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKG

Query:  ILYDHGPDHHHHQQQQ---PPNSASPDGGALL---------SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
        ILYDHGP+    QQQQ   PPNSASPDGGALL          PPISAALLDP PPYP PL TY AAGTQFFLPPTS
Subjt:  ILYDHGPDHHHHQQQQ---PPNSASPDGGALL---------SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

XP_023552309.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo]1.4e-10775.9Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCL
        MAGF+PLGGGR  N+H+PTTTT       TDGLFWY+NYES  +WQQQ  Q+Q GEGF YSG+ESPPRSSLVM+RSGR G GGQVISCQDCGNQAKKDCL
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCL

Query:  HMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKG
        HMRCRTCCKSRGF+CETHVKSTW+P SKRRER  R+   N KRPRD N AASSG EMGNLPVEVSSTAVFRCVRMTTLDET+DQ+ YQTAVNIGGH FKG
Subjt:  HMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKG

Query:  ILYDHGPDHHHHQQQQ-----PPNSASPDGGALL---------SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
        ILYDHGP+    QQQQ     PPNSASPDGGALL          PPIS ALLDP PPYP PL TY AAGTQFFLPPTS
Subjt:  ILYDHGPDHHHHQQQQ-----PPNSASPDGGALL---------SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

XP_038881624.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida]1.0e-10776.73Show/hide
Query:  MAGFFPLGG----GRGHNFHVPTTTT-----GGEIIHPTDGLFWYKNYESFELW---QQQQEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQD
        MAGFFPL G    GRG N+  PTTTT     GGEIIHPTDGLFWYKNYE  E W   QQQQEQGGEGF YSG+ESP RSSLVMVRSGRGG GGQV+SCQD
Subjt:  MAGFFPLGG----GRGHNFHVPTTTT-----GGEIIHPTDGLFWYKNYESFELW---QQQQEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQD

Query:  CGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTA
        CGNQAKKDC+HMRCRTCCKSRGFECETHVKSTW+P SKRRER  R   +NPKRP+D   AASSG EMG  P EVSSTAVFRCVRMTTLDETS+Q  YQTA
Subjt:  CGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTA

Query:  VNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDGGALL-SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
        VNIGGHIFKGILYDHGP       +QPP SASP+GGALL +   SA LLDP PPYPTPLTTY  AGTQFFLPPTS
Subjt:  VNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDGGALL-SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

XP_038881630.1 protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida]1.0e-10776.73Show/hide
Query:  MAGFFPLGG----GRGHNFHVPTTTT-----GGEIIHPTDGLFWYKNYESFELW---QQQQEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQD
        MAGFFPL G    GRG N+  PTTTT     GGEIIHPTDGLFWYKNYE  E W   QQQQEQGGEGF YSG+ESP RSSLVMVRSGRGG GGQV+SCQD
Subjt:  MAGFFPLGG----GRGHNFHVPTTTT-----GGEIIHPTDGLFWYKNYESFELW---QQQQEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQD

Query:  CGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTA
        CGNQAKKDC+HMRCRTCCKSRGFECETHVKSTW+P SKRRER  R   +NPKRP+D   AASSG EMG  P EVSSTAVFRCVRMTTLDETS+Q  YQTA
Subjt:  CGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTA

Query:  VNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDGGALL-SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
        VNIGGHIFKGILYDHGP       +QPP SASP+GGALL +   SA LLDP PPYPTPLTTY  AGTQFFLPPTS
Subjt:  VNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDGGALL-SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein1.1e-9468.82Show/hide
Query:  MAGFFPL----GGGRGHNFHVPTTTTGGEIIHP-TDGLFWYKNYESFELW-------QQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGR--GGCGGQVI
        MAGFFPL     GGR  N+H PT TTGGEIIHP T+GLFWYKNYE  E W       QQQ  QEQGGEGF YSG+ESP RSSLVMVRSGR  GG GG V 
Subjt:  MAGFFPL----GGGRGHNFHVPTTTTGGEIIHP-TDGLFWYKNYESFELW-------QQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGR--GGCGGQVI

Query:  SCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSN-AAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQY
        SCQDCGNQAKKDC+HMRCRTCCKSRGFECETHVKSTW+P SKRR+R  R+   N KRP+D++    SSG +MGN P EV++ AVFRCVRMT+LDET DQY
Subjt:  SCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSN-AAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQY

Query:  GYQTAVNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDGGALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
         YQTAVNIGG IFKGILYDHGP     +Q  PP S+S           SAALLDP PPYPTPL+TY  AGTQFFLPP+S
Subjt:  GYQTAVNIGGHIFKGILYDHGPDHHHHQQQQPPNSASPDGGALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

A0A6J1EMT4 protein SHI RELATED SEQUENCE 3-like6.9e-9773.78Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQQEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHM
        MAGFFPLGGG G        ++GGEIIHPTDGL WYKNYESFE   +QQ+QGGEGF YSGE SP RSSLVMVRSG    GG+VISCQDCGNQAKKDC+HM
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQQEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHM

Query:  RCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDET--SDQYGYQTAVNIGGHIFKG
        RCRTCCKSRGF CETHVKSTW+P SKRRER  R    + KRPRD++ AASSGFE+GN P EV+STAVFRCVRMTTLDE   +DQY YQTAVNIGGHIFKG
Subjt:  RCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDET--SDQYGYQTAVNIGGHIFKG

Query:  ILYDHGPD--HHHHQQQQPPNSASPDGGALL-SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
        ILYDHGPD  HHHH    PP SASPDGGALL +   SAA LDP P YP PL +Y  AGTQFF PPTS
Subjt:  ILYDHGPD--HHHHQQQQPPNSASPDGGALL-SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

A0A6J1FUH1 protein SHORT INTERNODES-like8.6e-10875.82Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCL
        MAGFFPLGGGR  N+H+PTTTT       TDGLFWY+NYES  +WQQQ  Q+Q GEGF YSG+ESPPRSSLVM+RSGR G GGQVISCQDCGNQAKKDCL
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCL

Query:  HMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKG
        HMRCRTCCKSRGF+CETHVKSTW+P SKRRER  R+   N KRPRD N AASSG EM N PVEVSSTAVFRCVRMTTLDET+DQ+ YQTAVNIGGH FKG
Subjt:  HMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKG

Query:  ILYDHGPDHHHHQQQQPPNSASPDGGALL---------SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
        ILYDHGP+        PPNSASPDGGALL          PPISAALLDP PPYP PL TY AAGTQFFLPPTS
Subjt:  ILYDHGPDHHHHQQQQPPNSASPDGGALL---------SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like3.0e-10876.45Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCL
        MAGFFPLGGGR  N+H+PTTTT       TDGLFWY+NYES  +WQQQ  Q+Q GEGF YSG+ESPPRSSLVM+RSGR G GGQVISCQDCGNQAKKDCL
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQ--QEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCL

Query:  HMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKG
        HMRCRTCCKSRGF+CETHVKSTW+P SKRRER  R+   N KRPRD N AASSG EMGN P+EVSSTAVFRCVRMTTLDET+DQ+ YQTAVNIGGH FKG
Subjt:  HMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKG

Query:  ILYDHGPDHHHHQQQQ---PPNSASPDGGALL---------SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
        ILYDHGP+    QQQQ   PPNSASPDGGALL          PPISAALLDP PPYP PL TY AAGTQFFLPPTS
Subjt:  ILYDHGPDHHHHQQQQ---PPNSASPDGGALL---------SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

A0A6J1J673 protein SHI RELATED SEQUENCE 1-like1.5e-9672.66Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQQEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHM
        MAGFFPLGGG G        ++GGEIIHPTDGL WYKNYESFE   +QQ+QGGE FGYSGE SP RSSLVMVRSG  G GG+VISCQDCGNQAKKDC+HM
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQQEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHM

Query:  RCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDET--SDQYGYQTAVNIGGHIFKG
        RCRTCCKSRGF CETHVKSTW+P SKRRER       + KRPRD++ A SSGFE+GN P E++STAVFRCVRMTTLDE   +DQY YQTAVNIGGHIFKG
Subjt:  RCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDET--SDQYGYQTAVNIGGHIFKG

Query:  ILYDHGPD--HHHHQQQQPPNSASPDGGALL-SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
        IL+DHGPD   HHH    PP SASPDGGALL +   SAALLDP P YP PL++Y  AGTQFF PPTS
Subjt:  ILYDHGPD--HHHHQQQQPPNSASPDGGALL-SPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 11.6e-4737.05Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKN--------------YESFELWQ------------QQQEQ----------------------G
        MA FF LGG +    H   +++   +   ++  F Y+N              Y+ FELWQ            QQQ+Q                       
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKN--------------YESFELWQ------------QQQEQ----------------------G

Query:  GEGFGYS-GEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPR--------------NGDN
          GF  S G+    RS  VM+RSG GG     ISCQDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTW+P +KRRERQ +              N ++
Subjt:  GEGFGYS-GEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPR--------------NGDN

Query:  NPKRPRDSNAAAS----------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPD---------------------
          KR R+  +A+S          +G E+G  P +V ++AVF+C++M+++++  DQ  YQ AV+IGGH+FKGILYD G +                     
Subjt:  NPKRPRDSNAAAS----------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPD---------------------

Query:  --HHHHQQQQPPNSASPDGG-ALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
          HHHH       + +  GG A  + P  +  LDP   +P PL+T+  AGTQFF P  S
Subjt:  --HHHHQQQQPPNSASPDGG-ALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

Q9FXH7 Protein SHI RELATED SEQUENCE 73.9e-4136.95Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYK-----NYESFEL-----WQQQQEQG--------------GEGFGYSGEESPPRSSLVMVRSG-
        MAG F L GGR HN                + L+ YK     N + FE+     +QQQQ+Q                 G   +   S  RS    V S  
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYK-----NYESFEL-----WQQQQEQG--------------GEGFGYSGEESPPRSSLVMVRSG-

Query:  ---RGGCGGQVI------SCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNA-------------------
           R   GG  +      +CQDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTW+  +KRRERQ +      KR RD+N+                   
Subjt:  ---RGGCGGQVI------SCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNA-------------------

Query:  -------------AASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGP--DHH-------------HHQQQQPPNSA
                     A+SSG E  +LP E+SS AVFRC+R++++D+  ++Y YQTAV+IGGH+FKGILYD GP  DHH             HH        +
Subjt:  -------------AASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGP--DHH-------------HHQQQQPPNSA

Query:  SPDGGALLSPPISAALLDPLPPY---PTPLTTYTAAGTQFF
        +    A+ +   +   +DP   Y    TP   + A GT FF
Subjt:  SPDGGALLSPPISAALLDPLPPY---PTPLTTYTAAGTQFF

Q9LQZ5 Protein SHI RELATED SEQUENCE 57.4e-4037.18Show/hide
Query:  MAGFFPLGG--GRGHNFHVPTTTTGGEIIH--PTDGLFWYK-----NYESFELW------------QQQQEQGG-------------EGFGYSGEESPPR
        MAGFF LGG     +N          +  H   ++ L+ YK     N + FE+W            QQQQ+Q                G   +   +  R
Subjt:  MAGFFPLGG--GRGHNFHVPTTTTGGEIIH--PTDGLFWYK-----NYESFELW------------QQQQEQGG-------------EGFGYSGEESPPR

Query:  SSLVMVRSGRGGCGGQV-----ISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRE------------------------RQPRNGDN
        S    V S     G  V     ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTW+P +KRRE                        R+   GDN
Subjt:  SSLVMVRSGRGGCGGQV-----ISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRE------------------------RQPRNGDN

Query:  NPKR------------PRDSNAAASSGFEMG-NLPVEVSSTAVFRCVRMTTLDETSDQ--YGYQTAVNIGGHIFKGILYDHGPDH--HHHQQQQPPNSAS
        N  +             R  NA ++SG E+  +LP EV+S A+FRCVR+++++E  D   Y YQTAVNIGGHIFKGILYD GP+H  +HH       + +
Subjt:  NPKR------------PRDSNAAASSGFEMG-NLPVEVSSTAVFRCVRMTTLDETSDQ--YGYQTAVNIGGHIFKGILYDHGPDH--HHHQQQQPPNSAS

Query:  PDGGALLSPPI-----SAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
         +     +  +     +  +LDP   YP  L ++  AGT FF PP S
Subjt:  PDGGALLSPPI-----SAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

Q9SD40 Protein SHI RELATED SEQUENCE 11.1e-4637.47Show/hide
Query:  MAGFFPL-----GGGRGHNFHVPTTTTGGEIIHPTDGLFWYKN----------------------YESFELWQQQQEQ-------------------GGE
        MAGFF L     GGG G N      +        ++   WY+N                        + ELWQ   +Q                    G 
Subjt:  MAGFFPL-----GGGRGHNFHVPTTTTGGEIIHPTDGLFWYKN----------------------YESFELWQQQQEQ-------------------GGE

Query:  G--------FGYSGEESPP----RSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPR---------
        G        F  SGE S       ++++M+RSG  G G   +SCQDCGNQAKKDC HMRCRTCCKSRGFEC THV+STW+P +KRRERQ +         
Subjt:  G--------FGYSGEESPP----RSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPR---------

Query:  --NGDNNPKRPRDSNAAAS-----------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHH------------
           G++ PKR R++  A S           SG E+GN P EVSS+AVFRCVR++++++  +++ YQTAV+IGGHIFKGILYD GP               
Subjt:  --NGDNNPKRPRDSNAAAS-----------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHH------------

Query:  -----HHQQQ-----------QPPNSASPD-GGALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
                QQ              +S++P+ GG   S   +A  +DP   YPTP+ T+  AGTQFF  P S
Subjt:  -----HHQQQ-----------QPPNSASPD-GGALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

Q9XGX0 Protein SHORT INTERNODES1.5e-4540.91Show/hide
Query:  MAGFFPLG-GGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYES--------------FELW------------QQQQEQ--------GGEGFGYSGEESPP
        MAGFF LG GG G+      T T       T+   W +N  S               ELW            QQQQ+Q         G G G S      
Subjt:  MAGFFPLG-GGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYES--------------FELW------------QQQQEQ--------GGEGFGYSGEESPP

Query:  RS--SLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQ---------PRNGDNNPKRPRDSNAAAS----
         S  +L+M+RSG G  G    SCQDCGNQ+KKDC HMRCRTCCKSRG +C THVKSTW+P +KRRERQ          + G + PKR R+   A S    
Subjt:  RS--SLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQ---------PRNGDNNPKRPRDSNAAAS----

Query:  ---------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQ--QQQPPNSASPDGGALLSPP---------
                 SG E+GN P EVSS+AVFRCVR++++D+  ++Y Y+TAV+IGGH+FKG+LYD GP          QP N  +    A  S P         
Subjt:  ---------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQ--QQQPPNSASPDGGALLSPP---------

Query:  --ISAALLDPLP-PYPTPLTTYTAAGTQFF
           S   +DP    YPTP+ T+   GT FF
Subjt:  --ISAALLDPLP-PYPTPLTTYTAAGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G19790.1 SHI-related sequence 72.8e-4236.95Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYK-----NYESFEL-----WQQQQEQG--------------GEGFGYSGEESPPRSSLVMVRSG-
        MAG F L GGR HN                + L+ YK     N + FE+     +QQQQ+Q                 G   +   S  RS    V S  
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYK-----NYESFEL-----WQQQQEQG--------------GEGFGYSGEESPPRSSLVMVRSG-

Query:  ---RGGCGGQVI------SCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNA-------------------
           R   GG  +      +CQDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTW+  +KRRERQ +      KR RD+N+                   
Subjt:  ---RGGCGGQVI------SCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNA-------------------

Query:  -------------AASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGP--DHH-------------HHQQQQPPNSA
                     A+SSG E  +LP E+SS AVFRC+R++++D+  ++Y YQTAV+IGGH+FKGILYD GP  DHH             HH        +
Subjt:  -------------AASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGP--DHH-------------HHQQQQPPNSA

Query:  SPDGGALLSPPISAALLDPLPPY---PTPLTTYTAAGTQFF
        +    A+ +   +   +DP   Y    TP   + A GT FF
Subjt:  SPDGGALLSPPISAALLDPLPPY---PTPLTTYTAAGTQFF

AT1G19790.2 SHI-related sequence 72.8e-4236.95Show/hide
Query:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYK-----NYESFEL-----WQQQQEQG--------------GEGFGYSGEESPPRSSLVMVRSG-
        MAG F L GGR HN                + L+ YK     N + FE+     +QQQQ+Q                 G   +   S  RS    V S  
Subjt:  MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYK-----NYESFEL-----WQQQQEQG--------------GEGFGYSGEESPPRSSLVMVRSG-

Query:  ---RGGCGGQVI------SCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNA-------------------
           R   GG  +      +CQDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTW+  +KRRERQ +      KR RD+N+                   
Subjt:  ---RGGCGGQVI------SCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNA-------------------

Query:  -------------AASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGP--DHH-------------HHQQQQPPNSA
                     A+SSG E  +LP E+SS AVFRC+R++++D+  ++Y YQTAV+IGGH+FKGILYD GP  DHH             HH        +
Subjt:  -------------AASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGP--DHH-------------HHQQQQPPNSA

Query:  SPDGGALLSPPISAALLDPLPPY---PTPLTTYTAAGTQFF
        +    A+ +   +   +DP   Y    TP   + A GT FF
Subjt:  SPDGGALLSPPISAALLDPLPPY---PTPLTTYTAAGTQFF

AT1G75520.1 SHI-related sequence 55.3e-4137.18Show/hide
Query:  MAGFFPLGG--GRGHNFHVPTTTTGGEIIH--PTDGLFWYK-----NYESFELW------------QQQQEQGG-------------EGFGYSGEESPPR
        MAGFF LGG     +N          +  H   ++ L+ YK     N + FE+W            QQQQ+Q                G   +   +  R
Subjt:  MAGFFPLGG--GRGHNFHVPTTTTGGEIIH--PTDGLFWYK-----NYESFELW------------QQQQEQGG-------------EGFGYSGEESPPR

Query:  SSLVMVRSGRGGCGGQV-----ISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRE------------------------RQPRNGDN
        S    V S     G  V     ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTW+P +KRRE                        R+   GDN
Subjt:  SSLVMVRSGRGGCGGQV-----ISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRE------------------------RQPRNGDN

Query:  NPKR------------PRDSNAAASSGFEMG-NLPVEVSSTAVFRCVRMTTLDETSDQ--YGYQTAVNIGGHIFKGILYDHGPDH--HHHQQQQPPNSAS
        N  +             R  NA ++SG E+  +LP EV+S A+FRCVR+++++E  D   Y YQTAVNIGGHIFKGILYD GP+H  +HH       + +
Subjt:  NPKR------------PRDSNAAASSGFEMG-NLPVEVSSTAVFRCVRMTTLDETSDQ--YGYQTAVNIGGHIFKGILYDHGPDH--HHHQQQQPPNSAS

Query:  PDGGALLSPPI-----SAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
         +     +  +     +  +LDP   YP  L ++  AGT FF PP S
Subjt:  PDGGALLSPPI-----SAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

AT3G51060.1 Lateral root primordium (LRP) protein-related7.6e-4837.47Show/hide
Query:  MAGFFPL-----GGGRGHNFHVPTTTTGGEIIHPTDGLFWYKN----------------------YESFELWQQQQEQ-------------------GGE
        MAGFF L     GGG G N      +        ++   WY+N                        + ELWQ   +Q                    G 
Subjt:  MAGFFPL-----GGGRGHNFHVPTTTTGGEIIHPTDGLFWYKN----------------------YESFELWQQQQEQ-------------------GGE

Query:  G--------FGYSGEESPP----RSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPR---------
        G        F  SGE S       ++++M+RSG  G G   +SCQDCGNQAKKDC HMRCRTCCKSRGFEC THV+STW+P +KRRERQ +         
Subjt:  G--------FGYSGEESPP----RSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQPR---------

Query:  --NGDNNPKRPRDSNAAAS-----------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHH------------
           G++ PKR R++  A S           SG E+GN P EVSS+AVFRCVR++++++  +++ YQTAV+IGGHIFKGILYD GP               
Subjt:  --NGDNNPKRPRDSNAAAS-----------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHH------------

Query:  -----HHQQQ-----------QPPNSASPD-GGALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS
                QQ              +S++P+ GG   S   +A  +DP   YPTP+ T+  AGTQFF  P S
Subjt:  -----HHQQQ-----------QPPNSASPD-GGALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS

AT5G66350.1 Lateral root primordium (LRP) protein-related1.1e-4640.91Show/hide
Query:  MAGFFPLG-GGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYES--------------FELW------------QQQQEQ--------GGEGFGYSGEESPP
        MAGFF LG GG G+      T T       T+   W +N  S               ELW            QQQQ+Q         G G G S      
Subjt:  MAGFFPLG-GGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYES--------------FELW------------QQQQEQ--------GGEGFGYSGEESPP

Query:  RS--SLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQ---------PRNGDNNPKRPRDSNAAAS----
         S  +L+M+RSG G  G    SCQDCGNQ+KKDC HMRCRTCCKSRG +C THVKSTW+P +KRRERQ          + G + PKR R+   A S    
Subjt:  RS--SLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFECETHVKSTWIPVSKRRERQ---------PRNGDNNPKRPRDSNAAAS----

Query:  ---------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQ--QQQPPNSASPDGGALLSPP---------
                 SG E+GN P EVSS+AVFRCVR++++D+  ++Y Y+TAV+IGGH+FKG+LYD GP          QP N  +    A  S P         
Subjt:  ---------SGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQ--QQQPPNSASPDGGALLSPP---------

Query:  --ISAALLDPLP-PYPTPLTTYTAAGTQFF
           S   +DP    YPTP+ T+   GT FF
Subjt:  --ISAALLDPLP-PYPTPLTTYTAAGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGGACACAATTTTCACGTTCCCACCACCACAACCGGCGGCGAGATTATCCATCCCACCGACGGGTTATTTTGGTACAA
AAATTATGAGAGCTTTGAATTATGGCAGCAGCAACAAGAACAAGGGGGAGAAGGGTTTGGTTACTCCGGCGAGGAATCGCCGCCAAGGTCGTCGTTGGTGATGGTGAGAT
CCGGCAGAGGCGGCTGCGGAGGGCAAGTTATAAGCTGCCAAGATTGTGGAAATCAAGCCAAAAAAGATTGCCTTCACATGCGATGTAGAACTTGCTGCAAAAGCCGTGGC
TTTGAATGTGAAACCCACGTCAAAAGCACTTGGATTCCGGTCTCCAAACGCCGTGAACGGCAGCCCCGTAACGGCGACAATAACCCCAAACGCCCCCGTGACAGCAACGC
CGCCGCCTCTTCAGGGTTTGAAATGGGGAATTTGCCGGTGGAAGTGAGCTCAACGGCGGTGTTCCGGTGTGTACGGATGACAACGTTGGACGAAACAAGCGACCAATACG
GTTACCAAACGGCCGTTAACATCGGCGGCCATATTTTCAAAGGGATTCTTTACGACCACGGCCCCGACCACCACCACCATCAACAACAACAACCACCCAACTCCGCCTCC
CCCGACGGCGGCGCCCTCCTCTCGCCGCCCATCAGCGCTGCATTGCTTGATCCCCTTCCGCCGTACCCAACTCCTCTCACCACCTACACCGCCGCCGGTACGCAATTCTT
CCTTCCCCCAACATCCTAA
mRNA sequenceShow/hide mRNA sequence
AAAGAAGAGAGAGAAAGTGTAATGAATAATTTGTGCAGCAACTGCAACATAATCAGAGCATAGAGAAAGGGAAAGGGCTCAGAGAAAACAGAGAAGAAGTAGAAAAAATA
TGTGTGGATTTGGAAGTTTTGTTTCTCTGTGTATTTAAGTTAGCACCGCCCTTCCCTCATGGCGGCGCCGTTGCAGACTTCAGTTCAGTTTTAGACACACAAAACACATC
ATTTCTCTTTTTCATTTTTTTCTTCTGGTACGAGAATTTGATTTCATTAGGTGAAAAAAAATGGAAGGGAATTGAGTGGTACATACCTTTCTTTTTTTTTCTGGTATGGA
TTTTATTTCAAAATTAGGAACAATCTCTCCGGTGGAAATATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGGACACAATTTTCACGTTCCCACCACCACAACCGGCGG
CGAGATTATCCATCCCACCGACGGGTTATTTTGGTACAAAAATTATGAGAGCTTTGAATTATGGCAGCAGCAACAAGAACAAGGGGGAGAAGGGTTTGGTTACTCCGGCG
AGGAATCGCCGCCAAGGTCGTCGTTGGTGATGGTGAGATCCGGCAGAGGCGGCTGCGGAGGGCAAGTTATAAGCTGCCAAGATTGTGGAAATCAAGCCAAAAAAGATTGC
CTTCACATGCGATGTAGAACTTGCTGCAAAAGCCGTGGCTTTGAATGTGAAACCCACGTCAAAAGCACTTGGATTCCGGTCTCCAAACGCCGTGAACGGCAGCCCCGTAA
CGGCGACAATAACCCCAAACGCCCCCGTGACAGCAACGCCGCCGCCTCTTCAGGGTTTGAAATGGGGAATTTGCCGGTGGAAGTGAGCTCAACGGCGGTGTTCCGGTGTG
TACGGATGACAACGTTGGACGAAACAAGCGACCAATACGGTTACCAAACGGCCGTTAACATCGGCGGCCATATTTTCAAAGGGATTCTTTACGACCACGGCCCCGACCAC
CACCACCATCAACAACAACAACCACCCAACTCCGCCTCCCCCGACGGCGGCGCCCTCCTCTCGCCGCCCATCAGCGCTGCATTGCTTGATCCCCTTCCGCCGTACCCAAC
TCCTCTCACCACCTACACCGCCGCCGGTACGCAATTCTTCCTTCCCCCAACATCCTAAGTGAATATTTATGATATTACCATTTAAGTGAAATTGAGAGGAAAAATAAAAA
AACAAAAATCTGAGAATATTATTATGAAGTATGTTTGTGTCATAAGTATATAGTTTTTTTTTTATGATAAATTTATAAGCATGTAATTTTTCTTTCAAGATTTTGCATTA
ATATGTGC
Protein sequenceShow/hide protein sequence
MAGFFPLGGGRGHNFHVPTTTTGGEIIHPTDGLFWYKNYESFELWQQQQEQGGEGFGYSGEESPPRSSLVMVRSGRGGCGGQVISCQDCGNQAKKDCLHMRCRTCCKSRG
FECETHVKSTWIPVSKRRERQPRNGDNNPKRPRDSNAAASSGFEMGNLPVEVSSTAVFRCVRMTTLDETSDQYGYQTAVNIGGHIFKGILYDHGPDHHHHQQQQPPNSAS
PDGGALLSPPISAALLDPLPPYPTPLTTYTAAGTQFFLPPTS