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Sed0002049 (gene) of Chayote v1 genome

Gene IDSed0002049
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG02:1738662..1739475
RNA-Seq ExpressionSed0002049
SyntenySed0002049
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG51109.1 hypothetical protein EZV62_023633 [Acer yangbiense]3.7e-2034.55Show/hide
Query:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIF
        MD  + ++   +L+I  +E   ++ V D+  ES  K+LD  LV K+L+ K V+ + F+ +IPKIW +++ +E + DN FL  F ++  + RV+  GPW F
Subjt:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIF

Query:  DNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF
        DN+ LV + L     ++++ F    FWV+I + P +C +K     LG ++GE    D    G+CF
Subjt:  DNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF

TXG57168.1 hypothetical protein EZV62_018481 [Acer yangbiense]2.6e-2135.8Show/hide
Query:  FDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIFDNA
        ++ ++    L I+ +E   ++ V+D   ++ EK+LD  LV KIL+ K V+ D F+ +IP+IW + V +E + DN +L  F ++  + RV+  GPW FDN 
Subjt:  FDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIFDNA

Query:  LLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF
        LLV + LS  + ++ L F   AFWV+I + P +C +K     +G  LG+    D    G+CF
Subjt:  LLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF

TXG60815.1 hypothetical protein EZV62_012178 [Acer yangbiense]1.7e-2033.73Show/hide
Query:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSE-VSLETLGDNKFLCTFGSKIAKERVVESGPWI
        MD  + A+  E+L +   +   ++ V+D       K+L+  LV K+++ K+V+ D F+ ++PKIW ++ + +E + DN FL  F S+  + RV+  GPW 
Subjt:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSE-VSLETLGDNKFLCTFGSKIAKERVVESGPWI

Query:  FDNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF
        FDN+LLV + L+    + +++F    FWV+IH+ P +C +K     LG I+G+    D    G+CF
Subjt:  FDNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF

TXG63892.1 hypothetical protein EZV62_010886 [Acer yangbiense]1.7e-2034.55Show/hide
Query:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIF
        MD  + ++   +L I  Q+   ++ V D   ES  ++LD  LV K+L+ K V+ + F+ +IPKIW +++ +E + DN FL  F ++  + R +  GPW F
Subjt:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIF

Query:  DNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF
        DN+LLV D LS    +++L F    FWV+I + P +C ++     +G ++GE    D    G+CF
Subjt:  DNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF

TXG72934.1 hypothetical protein EZV62_001513 [Acer yangbiense]1.7e-2034.34Show/hide
Query:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSE--VSLETLGDNKFLCTFGSKIAKERVVESGPW
        MD+ D +    +L ID+ +A  V  ++ N +   ++ L  +LV KIL+ K V+ D F ++I KIW     V +E++  N F   F  K   ERV+  GPW
Subjt:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSE--VSLETLGDNKFLCTFGSKIAKERVVESGPW

Query:  IFDNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCFLMGRSCVNRYSISEGKSSKVRSRDRAGEGVE
         FDNAL+  +       +  L F +A FWV+IH VP +C +K   R LG ++G+    D    GDC         R +IS      +R  D  G+G E
Subjt:  IFDNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCFLMGRSCVNRYSISEGKSSKVRSRDRAGEGVE

TrEMBL top hitse value%identityAlignment
A0A5C7H2W5 DUF4283 domain-containing protein1.8e-2034.55Show/hide
Query:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIF
        MD  + ++   +L+I  +E   ++ V D+  ES  K+LD  LV K+L+ K V+ + F+ +IPKIW +++ +E + DN FL  F ++  + RV+  GPW F
Subjt:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIF

Query:  DNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF
        DN+ LV + L     ++++ F    FWV+I + P +C +K     LG ++GE    D    G+CF
Subjt:  DNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF

A0A5C7HJW9 H15 domain-containing protein1.2e-2135.8Show/hide
Query:  FDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIFDNA
        ++ ++    L I+ +E   ++ V+D   ++ EK+LD  LV KIL+ K V+ D F+ +IP+IW + V +E + DN +L  F ++  + RV+  GPW FDN 
Subjt:  FDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIFDNA

Query:  LLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF
        LLV + LS  + ++ L F   AFWV+I + P +C +K     +G  LG+    D    G+CF
Subjt:  LLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF

A0A5C7HVE7 Uncharacterized protein8.1e-2133.73Show/hide
Query:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSE-VSLETLGDNKFLCTFGSKIAKERVVESGPWI
        MD  + A+  E+L +   +   ++ V+D       K+L+  LV K+++ K+V+ D F+ ++PKIW ++ + +E + DN FL  F S+  + RV+  GPW 
Subjt:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSE-VSLETLGDNKFLCTFGSKIAKERVVESGPWI

Query:  FDNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF
        FDN+LLV + L+    + +++F    FWV+IH+ P +C +K     LG I+G+    D    G+CF
Subjt:  FDNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF

A0A5C7I5T6 Uncharacterized protein8.1e-2134.55Show/hide
Query:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIF
        MD  + ++   +L I  Q+   ++ V D   ES  ++LD  LV K+L+ K V+ + F+ +IPKIW +++ +E + DN FL  F ++  + R +  GPW F
Subjt:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIF

Query:  DNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF
        DN+LLV D LS    +++L F    FWV+I + P +C ++     +G ++GE    D    G+CF
Subjt:  DNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCF

A0A5C7IVM6 DUF4283 domain-containing protein8.1e-2134.34Show/hide
Query:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSE--VSLETLGDNKFLCTFGSKIAKERVVESGPW
        MD+ D +    +L ID+ +A  V  ++ N +   ++ L  +LV KIL+ K V+ D F ++I KIW     V +E++  N F   F  K   ERV+  GPW
Subjt:  MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSE--VSLETLGDNKFLCTFGSKIAKERVVESGPW

Query:  IFDNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCFLMGRSCVNRYSISEGKSSKVRSRDRAGEGVE
         FDNAL+  +       +  L F +A FWV+IH VP +C +K   R LG ++G+    D    GDC         R +IS      +R  D  G+G E
Subjt:  IFDNALLVFDSLSANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCFLMGRSCVNRYSISEGKSSKVRSRDRAGEGVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCATTTGACTTCGCTCAACGAATGGAAAACTTGGTGATAGATGATCAAGAAGCCCACGCGGTCTTTGAGGTGGAAGATAACGAGATAGAAAGTTATGAGAAGGA
GCTGGACTGTACATTGGTGTGCAAGATTCTTACTGAGAAATTTGTTAGCCCAGATATGTTCAAAAAGCTCATTCCTAAAATTTGGAACTCAGAGGTAAGTCTTGAAACGC
TGGGAGACAATAAATTTTTATGTACGTTCGGAAGCAAAATAGCTAAAGAGCGTGTAGTCGAGTCAGGGCCATGGATTTTTGATAACGCTCTTTTGGTCTTTGATTCATTA
AGTGCTAACAAACGGGTCTCTGAATTAGAGTTCGGTTTTGCTGCGTTTTGGGTTAGAATTCATGACGTTCCCCCTGTGTGTCATTCTAAAAGTAGTGCAAGAAGGCTAGG
AAATATACTAGGCGAGTTTCGAGGGTGGGATTGTGAAGGAGATGGAGACTGTTTCCTTATGGGGAGGAGCTGCGTGAACCGCTATTCTATTTCAGAGGGGAAAAGCAGCA
AAGTCCGGAGCAGGGACAGAGCGGGAGAGGGCGTGGAAGAGGGCGAGGTTTCGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCATTTGACTTCGCTCAACGAATGGAAAACTTGGTGATAGATGATCAAGAAGCCCACGCGGTCTTTGAGGTGGAAGATAACGAGATAGAAAGTTATGAGAAGGA
GCTGGACTGTACATTGGTGTGCAAGATTCTTACTGAGAAATTTGTTAGCCCAGATATGTTCAAAAAGCTCATTCCTAAAATTTGGAACTCAGAGGTAAGTCTTGAAACGC
TGGGAGACAATAAATTTTTATGTACGTTCGGAAGCAAAATAGCTAAAGAGCGTGTAGTCGAGTCAGGGCCATGGATTTTTGATAACGCTCTTTTGGTCTTTGATTCATTA
AGTGCTAACAAACGGGTCTCTGAATTAGAGTTCGGTTTTGCTGCGTTTTGGGTTAGAATTCATGACGTTCCCCCTGTGTGTCATTCTAAAAGTAGTGCAAGAAGGCTAGG
AAATATACTAGGCGAGTTTCGAGGGTGGGATTGTGAAGGAGATGGAGACTGTTTCCTTATGGGGAGGAGCTGCGTGAACCGCTATTCTATTTCAGAGGGGAAAAGCAGCA
AAGTCCGGAGCAGGGACAGAGCGGGAGAGGGCGTGGAAGAGGGCGAGGTTTCGGAGTAA
Protein sequenceShow/hide protein sequence
MDAFDFAQRMENLVIDDQEAHAVFEVEDNEIESYEKELDCTLVCKILTEKFVSPDMFKKLIPKIWNSEVSLETLGDNKFLCTFGSKIAKERVVESGPWIFDNALLVFDSL
SANKRVSELEFGFAAFWVRIHDVPPVCHSKSSARRLGNILGEFRGWDCEGDGDCFLMGRSCVNRYSISEGKSSKVRSRDRAGEGVEEGEVSE