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Sed0002052 (gene) of Chayote v1 genome

Gene IDSed0002052
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:2917623..2918220
RNA-Seq ExpressionSed0002052
SyntenySed0002052
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044336.1 hypothetical protein E6C27_scaffold46G00610 [Cucumis melo var. makuwa]2.3e-0647.25Show/hide
Query:  KSFGLMAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCETHDDC---PDACACYTRSKTCGDLV
        K+ G  A  MVM+L+IAT+  S  + TE A IELVTD   A +FPRK++ N +G+ VC + G PC     C      CACYT S  CGD V
Subjt:  KSFGLMAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCETHDDC---PDACACYTRSKTCGDLV

KAA0044337.1 hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa]3.7e-0441.76Show/hide
Query:  KSFGLMAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCETHDDC---PDACACYTRSKTCGDLV
        ++ G  A  MVM+L+IAT+  S +   +   I+LVTD   A +FPRK++ N +G+ VC + G PC     C    D+CACYT    CGD V
Subjt:  KSFGLMAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCETHDDC---PDACACYTRSKTCGDLV

KAA0044338.1 hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa]1.6e-0745.83Show/hide
Query:  MESKK-SFGL---MAMAMVMLLMIATMSNSVTAVTESAKIELVTDGGADTFPRK--VLNNEGSHVCEVVGKPCETHDDCPDACACYTRSKTCGDLV
        MESKK S GL     + M+++ MIAT+++S T  TE+     V +GG+  FPRK  + N + + VC V GK C++H DCP  CACYT    CGD V
Subjt:  MESKK-SFGL---MAMAMVMLLMIATMSNSVTAVTESAKIELVTDGGADTFPRK--VLNNEGSHVCEVVGKPCETHDDCPDACACYTRSKTCGDLV

KGN52762.1 hypothetical protein Csa_014579 [Cucumis sativus]2.6e-0543.01Show/hide
Query:  KSFGL-MAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCE-THDDC---PDACACYTRSKTCGDLV
        K+ GL +A  MVM+L+IAT+  S +   +   IELVT+   A +FPRK++ N +G+ VC ++G+PC   +  C    D CACYT    CGD V
Subjt:  KSFGL-MAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCE-THDDC---PDACACYTRSKTCGDLV

KGN52763.1 hypothetical protein Csa_014543 [Cucumis sativus]3.8e-0946.81Show/hide
Query:  MES-KKSFGLMAMAMVMLL--MIATMSNSVTAVTESAKIELVTDGGADTFPRK-VLNNEGSHVCEVVGKPCETHDDCPDACACYTRSKTCGDLV
        MES KKS   +A  +V+++  MIAT+++S T  TE+    ++ DGG+  FPRK V+ N  + VC V GK C++H DCP  CACYT    CGD V
Subjt:  MES-KKSFGLMAMAMVMLL--MIATMSNSVTAVTESAKIELVTDGGADTFPRK-VLNNEGSHVCEVVGKPCETHDDCPDACACYTRSKTCGDLV

TrEMBL top hitse value%identityAlignment
A0A0A0KT53 Uncharacterized protein1.9e-0946.81Show/hide
Query:  MES-KKSFGLMAMAMVMLL--MIATMSNSVTAVTESAKIELVTDGGADTFPRK-VLNNEGSHVCEVVGKPCETHDDCPDACACYTRSKTCGDLV
        MES KKS   +A  +V+++  MIAT+++S T  TE+    ++ DGG+  FPRK V+ N  + VC V GK C++H DCP  CACYT    CGD V
Subjt:  MES-KKSFGLMAMAMVMLL--MIATMSNSVTAVTESAKIELVTDGGADTFPRK-VLNNEGSHVCEVVGKPCETHDDCPDACACYTRSKTCGDLV

A0A0A0KWE4 Uncharacterized protein1.2e-0543.01Show/hide
Query:  KSFGL-MAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCE-THDDC---PDACACYTRSKTCGDLV
        K+ GL +A  MVM+L+IAT+  S +   +   IELVT+   A +FPRK++ N +G+ VC ++G+PC   +  C    D CACYT    CGD V
Subjt:  KSFGL-MAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCE-THDDC---PDACACYTRSKTCGDLV

A0A5D3E009 Uncharacterized protein7.8e-0845.83Show/hide
Query:  MESKK-SFGL---MAMAMVMLLMIATMSNSVTAVTESAKIELVTDGGADTFPRK--VLNNEGSHVCEVVGKPCETHDDCPDACACYTRSKTCGDLV
        MESKK S GL     + M+++ MIAT+++S T  TE+     V +GG+  FPRK  + N + + VC V GK C++H DCP  CACYT    CGD V
Subjt:  MESKK-SFGL---MAMAMVMLLMIATMSNSVTAVTESAKIELVTDGGADTFPRK--VLNNEGSHVCEVVGKPCETHDDCPDACACYTRSKTCGDLV

A0A5D3E0N0 Uncharacterized protein1.8e-0441.76Show/hide
Query:  KSFGLMAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCETHDDC---PDACACYTRSKTCGDLV
        ++ G  A  MVM+L+IAT+  S +   +   I+LVTD   A +FPRK++ N +G+ VC + G PC     C    D+CACYT    CGD V
Subjt:  KSFGLMAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCETHDDC---PDACACYTRSKTCGDLV

A0A5D3E254 Uncharacterized protein1.1e-0647.25Show/hide
Query:  KSFGLMAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCETHDDC---PDACACYTRSKTCGDLV
        K+ G  A  MVM+L+IAT+  S  + TE A IELVTD   A +FPRK++ N +G+ VC + G PC     C      CACYT S  CGD V
Subjt:  KSFGLMAMAMVMLLMIATMSNSVTAVTESAKIELVTD-GGADTFPRKVL-NNEGSHVCEVVGKPCETHDDC---PDACACYTRSKTCGDLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAAGAAGAGTTTTGGCTTGATGGCAATGGCCATGGTGATGCTGCTTATGATCGCTACGATGTCGAACTCGGTCACCGCTGTCACCGAGAGCGCGAAGATTGA
GCTCGTGACCGACGGCGGTGCCGACACTTTCCCGAGAAAAGTACTCAACAATGAAGGAAGCCATGTCTGTGAAGTAGTAGGCAAGCCTTGTGAAACACATGATGATTGCC
CTGATGCATGTGCTTGCTACACCCGCAGCAAGACTTGTGGAGACTTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
GGAAGAAGTTAAGGGCAAAAGAAATCATAGAATTGAATTATTAAAGAGCTGAGAAGCAAAAGAAAATGGAGAGCAAGAAGAGTTTTGGCTTGATGGCAATGGCCATGGTG
ATGCTGCTTATGATCGCTACGATGTCGAACTCGGTCACCGCTGTCACCGAGAGCGCGAAGATTGAGCTCGTGACCGACGGCGGTGCCGACACTTTCCCGAGAAAAGTACT
CAACAATGAAGGAAGCCATGTCTGTGAAGTAGTAGGCAAGCCTTGTGAAACACATGATGATTGCCCTGATGCATGTGCTTGCTACACCCGCAGCAAGACTTGTGGAGACT
TGGTTTAAAATTCTATGTGTTGTGTTGTCTTTTTTCTTTATCTAAAAAAATAAATATCTCTTTCTTTCTCATGTTGATTATGATCTCTCTTGTGAGATTGTGATTGTGGA
TTAGTGTAACAAGTTATTGGTGCATTAATGGAAGGAATGGGGAGTTATGTGTAATCTTTCTTGTCATTTTCTATTGGGAATGTGTTAGAAATATTAAATCTAGTCTTGCT
ATGATTTTGTAGGTCTCAAAAGTGATTATAAATTTTGTTACTTTTGAG
Protein sequenceShow/hide protein sequence
MESKKSFGLMAMAMVMLLMIATMSNSVTAVTESAKIELVTDGGADTFPRKVLNNEGSHVCEVVGKPCETHDDCPDACACYTRSKTCGDLV