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Sed0002056 (gene) of Chayote v1 genome

Gene IDSed0002056
OrganismSechium edule (Chayote v1)
DescriptionFiber
Genome locationLG09:5594213..5605466
RNA-Seq ExpressionSed0002056
SyntenySed0002056
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459762.1 PREDICTED: uncharacterized protein LOC103498799 [Cucumis melo]1.0e-2190.48Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASC+I G GLFLP  VRP+LDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
XP_009789043.1 PREDICTED: uncharacterized protein LOC104236749 [Nicotiana sylvestris]6.1e-2290.48Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASCLIAGFGLFLP VVRPMLDS+E+SKQVPQP LSDVVA +TGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
XP_022958795.1 uncharacterized protein LOC111459960 [Cucurbita moschata]1.4e-2190.48Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASCLI G GLFLP VVRP+LDSYEASKQ PQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
XP_023006679.1 uncharacterized protein LOC111499335 [Cucurbita maxima]1.8e-2190.48Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASCLI G GLFLP VVRP+LDSYEASKQ PQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
XP_038875998.1 uncharacterized protein LOC120068338 [Benincasa hispida]6.1e-2292.06Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASCLI G GLFLP  VRP+LDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
TrEMBL top hitse value%identityAlignment
A0A1S3CAX6 uncharacterized protein LOC1034987995.1e-2290.48Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASC+I G GLFLP  VRP+LDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
A0A1S3YJI9 uncharacterized protein LOC1077768473.0e-2290.48Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASCLIAGFGLFLP VVRPMLDS+E+SKQVPQP LSDVVA +TGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
A0A1U7XDU7 uncharacterized protein LOC1042367493.0e-2290.48Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASCLIAGFGLFLP VVRPMLDS+E+SKQVPQP LSDVVA +TGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
A0A6J1H4H1 uncharacterized protein LOC1114599606.6e-2290.48Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVV ASCLI G GLFLP VVRP+LDSYEASKQ PQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
E5GCM8 Fiber protein fb115.1e-2290.48Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKLKMFVVQEPVVAASC+I G GLFLP  VRP+LDSYEASKQVPQPVLSDVVASMTGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46540.1 unknown protein5.5e-2177.78Show/hide
Query:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK
        MPVMEKL+MFV QEPVVAASCLI G GLFLP VVRP+LDS EASKQV  P L+DV+A +TGKK
Subjt:  MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTCATGGAGAAGCTCAAGATGTTCGTAGTTCAAGAGCCTGTGGTGGCTGCATCTTGTTTAATCGCTGGATTTGGTCTTTTCCTTCCAACCGTTGTAAGGCCAAT
GCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
AGTCCGGGTCGTAGAAGAAGTGCAAATCATTTCCCTTCCCTCATTCATCTCTACGAAGTTTGAAGAATCAGTTTCAGAGAAGCGAAGAATCAGACGAAACTTTGGAGAAG
ATGCCGGTCATGGAGAAGCTCAAGATGTTCGTAGTTCAAGAGCCTGTGGTGGCTGCATCTTGTTTAATCGCTGGATTTGGTCTTTTCCTTCCAACCGTTGTAAGGCCAAT
GCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAGTAAGGATGAGTGATATCAGTGACACAAGAAA
GATTGGTCTTAATGGATCACTCTTTTTTTTTTTTCCTTAATCAATTTTTCATTGCATAAATAAGCATGTACAACCTTTTTGGAAATCAAGTTTGATAGCATAGCCATTTG
AAACATTGCCTTGTTAAACTGAAAAATACTTTTCCTGTTGACTTTTTTGAAATATTTCAGTTTTAATCCGTCGGGTTGACGTGCTCGAAAGCCTGGTAAAAAACTTGGTT
TCACCATAAATTGAGGCCTAGAAACAAGATTTATCTATTATGTGGTAGGGTTAGATGACTTTCTTGTAATTATCGTGTAAGATGAGTCATTTGCACGTAAGTTGACTCGG
GACACTCCTAAAAAGAAGTAATATTCAAACTTGTGTTTGTTTTTAGAATTAACTTAGAATTCAAGTCTTTTTCGAAATAAGAAATTTATTGTCAACGTGTGATGTATATG
GGAGATAGAGAGATCAACTTTTATATTGAGTGGTGTGATGTTTGAGTTCA
Protein sequenceShow/hide protein sequence
MPVMEKLKMFVVQEPVVAASCLIAGFGLFLPTVVRPMLDSYEASKQVPQPVLSDVVASMTGKK