CuGenDBv2

Gene ID	Sed0002058
Organism	Sechium edule (Chayote v1)
Description	Fe(3+) dicitrate transport system permease
Genome location	LG12:27358501..27362728
RNA-Seq Expression	Sed0002058
Synteny	Sed0002058
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6590249.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia]

8.3e-117

95.22

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        MEGF+ EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLI+LGGCYVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTLIFHDH+H+HHGH GSIGDNLHRK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

XP_004144097.1 uncharacterized protein LOC101203325 [Cucumis sativus]

2.7e-115

94.78

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        MEGF+AEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVH+LASLLLIILG CYVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        MTGRGSHSHS NQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTLIFHDH+H+HHGH GS+GDNLHRK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

XP_022961278.1 uncharacterized protein LOC111461823 [Cucurbita moschata]

8.3e-117

95.22

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        MEGF+ EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLI+LGGCYVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTLIFHDH+H+HHGH GSIGDNLHRK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

XP_022988201.1 uncharacterized protein LOC111485510 [Cucurbita maxima]

2.4e-116

94.78

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        MEGF+ EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLI+LGGCYVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTLIFH+H+H+HHGH GSIGDNLHRK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

XP_038878584.1 uncharacterized protein LOC120070772 [Benincasa hispida]

1.2e-115

95.65

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        MEGF+AEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILG CYVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTLIFHDH+H+HHGH GSIGDNL RK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LZF1 Uncharacterized protein

1.3e-115

94.78

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        MEGF+AEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVH+LASLLLIILG CYVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        MTGRGSHSHS NQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTLIFHDH+H+HHGH GS+GDNLHRK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

A0A1S3BQP9 uncharacterized protein LOC103492468

1.1e-114

94.35

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        MEGF+AEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVH+LASLLLIILG CYVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTLIFHDH+H  HGH GS+GD LHRK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

A0A5D3CFB8 Stage II sporulation protein E

1.1e-114

94.35

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        MEGF+AEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVH+LASLLLIILG CYVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTLIFHDH+H  HGH GS+GD LHRK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

A0A6J1HBC5 uncharacterized protein LOC111461823

4.0e-117

95.22

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        MEGF+ EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLI+LGGCYVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTLIFHDH+H+HHGH GSIGDNLHRK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

A0A6J1JGK2 uncharacterized protein LOC111485510

1.2e-116

94.78

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        MEGF+ EDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLI+LGGCYVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMM+LAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTLIFH+H+H+HHGH GSIGDNLHRK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G21070.1 unknown protein

5.4e-106

86.09

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Query:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY
        M+ F+AEDLSTIGGIATVSLLHSFIPTHWLPFS+VGR QKWTLSRTLLVTAFGA+LHVISTSLLGITAITMANTIAGEETVHKLASLLL+ LGG YVLL+
Subjt:  MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLY

Query:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI
        + G+G H+HSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNS SMMVLAIIVLLFSTI VMTSLVALSFYGASQLKFHWVERYDKLLVGSVLC+VGI
Subjt:  MTGRGSHSHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGI

Query:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL
        LTL+FHDHD     H G     LHRK+I L
Subjt:  LTLIFHDHDHEHHGHAGSIGDNLHRKVIAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGGATTTAGTGCAGAAGATCTGTCCACAATCGGAGGAATTGCGACGGTGTCGCTTCTCCATTCCTTCATTCCCACTCACTGGCTCCCTTTCTCCGTCGTCGGCCG
CGTCCAGAAATGGACTCTCTCCAGAACTCTTCTCGTCACTGCCTTTGGAGCAATTTTGCATGTGATATCTACTTCACTTCTTGGAATAACAGCAATCACAATGGCTAATA
CAATTGCTGGTGAAGAAACTGTGCACAAGCTGGCTTCCCTTTTGCTTATAATTCTTGGAGGTTGTTATGTTTTATTGTATATGACTGGAAGAGGTAGTCATAGCCACTCC
CACAACCAACCAATGGAGAAAATGGCTGTTGCTGGTCTTGTTCTTGTACCTGCTTTATCTCCCTGTGCAACCACTCTTCCAGTGTTTCTTGCTGTTGGAAATTCGTCTTC
CATGATGGTGCTCGCTATCATAGTGCTGCTATTCAGCACAATAACTGTAATGACTTCATTGGTGGCTTTGTCATTCTACGGCGCCAGCCAGCTGAAGTTTCACTGGGTCG
AACGATACGACAAACTTCTTGTAGGTTCAGTGTTGTGCATGGTAGGTATCCTGACACTCATTTTTCACGACCACGACCACGAACATCACGGGCATGCAGGTTCCATAGGA
GACAATTTGCATAGGAAAGTTATTGCACTTTGA

mRNA sequence

Show/hide mRNA sequence

AAAAAAAATCAGAATTAAATCATGTAGGCTTGGGTACAAACGAAGATATTTGCTACAAAATTTTCCCGATGAGAAATTCTCACATTTTCAGTGTTGGATCTGTCTCAGAT
TCCGTTCCGGCGAGTTGAAACTCTAGGCGACGGCGGCGATTTCTCTCCCTACGGCGGCGGGCTGGTTTCGATTGGTAGCCAAATGGAAGGATTTAGTGCAGAAGATCTGT
CCACAATCGGAGGAATTGCGACGGTGTCGCTTCTCCATTCCTTCATTCCCACTCACTGGCTCCCTTTCTCCGTCGTCGGCCGCGTCCAGAAATGGACTCTCTCCAGAACT
CTTCTCGTCACTGCCTTTGGAGCAATTTTGCATGTGATATCTACTTCACTTCTTGGAATAACAGCAATCACAATGGCTAATACAATTGCTGGTGAAGAAACTGTGCACAA
GCTGGCTTCCCTTTTGCTTATAATTCTTGGAGGTTGTTATGTTTTATTGTATATGACTGGAAGAGGTAGTCATAGCCACTCCCACAACCAACCAATGGAGAAAATGGCTG
TTGCTGGTCTTGTTCTTGTACCTGCTTTATCTCCCTGTGCAACCACTCTTCCAGTGTTTCTTGCTGTTGGAAATTCGTCTTCCATGATGGTGCTCGCTATCATAGTGCTG
CTATTCAGCACAATAACTGTAATGACTTCATTGGTGGCTTTGTCATTCTACGGCGCCAGCCAGCTGAAGTTTCACTGGGTCGAACGATACGACAAACTTCTTGTAGGTTC
AGTGTTGTGCATGGTAGGTATCCTGACACTCATTTTTCACGACCACGACCACGAACATCACGGGCATGCAGGTTCCATAGGAGACAATTTGCATAGGAAAGTTATTGCAC
TTTGAGGATTTATATGATCTTATCCTGCAGATATAACTTCAAGTGGGTTTAAAGGTCAGTTTCTTGTATTCCTTTATTGCCATTTTGTCACATTTAAGAATCCTTTTATG
TATGATTAATATAGAAGCTTAACATCCCGCTTCGTCACTTGCCATAGACTTCTATGTTTAAGTTTTCGGTGTTCGAATGTTTTTTAATTTTTTTTTTTTTTTTTGCTTTC
CCTTTTCAAATGAAAATGTAATATGATCTTTTACCCTCTCCCTCTTTTCATAGAGAATCTCAAG

Protein sequence

Show/hide protein sequence

MEGFSAEDLSTIGGIATVSLLHSFIPTHWLPFSVVGRVQKWTLSRTLLVTAFGAILHVISTSLLGITAITMANTIAGEETVHKLASLLLIILGGCYVLLYMTGRGSHSHS
HNQPMEKMAVAGLVLVPALSPCATTLPVFLAVGNSSSMMVLAIIVLLFSTITVMTSLVALSFYGASQLKFHWVERYDKLLVGSVLCMVGILTLIFHDHDHEHHGHAGSIG
DNLHRKVIAL

Sed0002058 (gene) of Chayote v1 genome