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Sed0002110 (gene) of Chayote v1 genome

Gene IDSed0002110
OrganismSechium edule (Chayote v1)
DescriptionORM1-like protein 3
Genome locationLG06:7513016..7515261
RNA-Seq ExpressionSed0002110
SyntenySed0002110
Gene Ontology termsGO:0090156 - cellular sphingolipid homeostasis (biological process)
GO:1900060 - negative regulation of ceramide biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0035339 - SPOTS complex (cellular component)
InterPro domainsIPR007203 - ORMDL family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048873.1 ORM1-like protein 3 [Cucumis melo var. makuwa]4.2e-3860Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PPADLNRNTEWF+YPGVWTTYILILFFAW+L+LS+FGCSPGM W VVNLSHFA T     +K                   KGTPF ED G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYMKPIYESINSITYVVLV
        IYNRLTWWEQID GKQ     K++  +   +  IT  ++V
Subjt:  IYNRLTWWEQIDFGKQALSYLKYMKPIYESINSITYVVLV

KAG6597064.1 hypothetical protein SDJN03_10244, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3765.32Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PPADLNRNTEWFLYPGVWTTYILILFF W+L+LS+FGCSPGM W +VNLSHFA T              CF         +KGTPF ED G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYM
        IYNRLTWWEQID GKQ     K++
Subjt:  IYNRLTWWEQIDFGKQALSYLKYM

XP_008437865.1 PREDICTED: ORM1-like protein 3 [Cucumis melo]9.3e-3865.32Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PPADLNRNTEWF+YPGVWTTYILILFFAW+L+LS+FGCSPGM W VVNLSHFA T     +K                   KGTPF ED G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYM
        IYNRLTWWEQID GKQ     K++
Subjt:  IYNRLTWWEQIDFGKQALSYLKYM

XP_022147418.1 ORM1-like protein 3 [Momordica charantia]5.4e-3865.32Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PPADLNRNTEWFLYPGVWTTYILILFFAW+L+LS+FGCSPGM W +VNLSHFA T     +K                   KGTPF ED G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYM
        IYNRLTWWEQID GKQ     K++
Subjt:  IYNRLTWWEQIDFGKQALSYLKYM

XP_022947816.1 ORM1-like protein 3 [Cucurbita moschata]1.6e-3765.32Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PPADLNRNTEWFLYPGVWTTYILILFF W+L+LS+FGCSPGM W +VNLSHFA T              CF         +KGTPF ED G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYM
        IYNRLTWWEQID GKQ     K++
Subjt:  IYNRLTWWEQIDFGKQALSYLKYM

TrEMBL top hitse value%identityAlignment
A0A1S3AVL5 ORM1-like protein 34.5e-3865.32Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PPADLNRNTEWF+YPGVWTTYILILFFAW+L+LS+FGCSPGM W VVNLSHFA T     +K                   KGTPF ED G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYM
        IYNRLTWWEQID GKQ     K++
Subjt:  IYNRLTWWEQIDFGKQALSYLKYM

A0A5A7TZ34 ORM1-like protein 32.0e-3860Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PPADLNRNTEWF+YPGVWTTYILILFFAW+L+LS+FGCSPGM W VVNLSHFA T     +K                   KGTPF ED G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYMKPIYESINSITYVVLV
        IYNRLTWWEQID GKQ     K++  +   +  IT  ++V
Subjt:  IYNRLTWWEQIDFGKQALSYLKYMKPIYESINSITYVVLV

A0A6J1D195 ORM1-like protein 32.6e-3865.32Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PPADLNRNTEWFLYPGVWTTYILILFFAW+L+LS+FGCSPGM W +VNLSHFA T     +K                   KGTPF ED G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYM
        IYNRLTWWEQID GKQ     K++
Subjt:  IYNRLTWWEQIDFGKQALSYLKYM

A0A6J1G7I7 ORM1-like protein 37.7e-3865.32Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PPADLNRNTEWFLYPGVWTTYILILFF W+L+LS+FGCSPGM W +VNLSHFA T              CF         +KGTPF ED G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYM
        IYNRLTWWEQID GKQ     K++
Subjt:  IYNRLTWWEQIDFGKQALSYLKYM

A0A6J1IBE5 ORM1-like protein 37.7e-3865.32Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PPADLNRNTEWFLYPGVWTTYILILFF W+L+LS+FGCSPGM W +VNLSHFA T              CF         +KGTPF ED G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYM
        IYNRLTWWEQID GKQ     K++
Subjt:  IYNRLTWWEQIDFGKQALSYLKYM

SwissProt top hitse value%identityAlignment
O42901 Uncharacterized protein C119.09c1.1e-0427.27Show/hide
Query:  NRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLGIYNRLTWWEQIDFG
        N N+ W  Y G W  +I+++    ++  ++   S  + W + NL++ A   S  ++  +                  GTPF  + G Y+RLT WEQ+D G
Subjt:  NRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLGIYNRLTWWEQIDFG

Query:  KQALSYLKYM
         Q     KY+
Subjt:  KQALSYLKYM

Q5XJR6 ORM1-like protein 31.4e-0428.79Show/hide
Query:  ADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPF-TEDLGIYNRLTWWEQ
        +++N NT      G+W +Y+L +    I++LS+   S  + W + NL H              MC+  F          KGTPF T D G    LT WEQ
Subjt:  ADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPF-TEDLGIYNRLTWWEQ

Query:  IDFGKQALSYLKYMKPIYESINSITYVVLVYI
        +D+G Q  +  K++        +IT ++L ++
Subjt:  IDFGKQALSYLKYMKPIYESINSITYVVLVYI

Q6QI25 ORM1-like protein 31.8e-0428.03Show/hide
Query:  ADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPF-TEDLGIYNRLTWWEQ
        +++N NT      G+W +Y+L +    +++LS+   S  + W + NL H     +L +Y  +                 KGTPF T D G    LT WEQ
Subjt:  ADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPF-TEDLGIYNRLTWWEQ

Query:  IDFGKQALSYLKYMKPIYESINSITYVVLVYI
        +D+G Q  +  K++        +IT +VL ++
Subjt:  IDFGKQALSYLKYMKPIYESINSITYVVLVYI

Q921I0 ORM1-like protein 12.2e-0531.86Show/hide
Query:  ADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPF-TEDLGIYNRLTWWEQ
        +++N NT      G+W TY L +    I++LS+  CS  + W + N+ H     +L +Y  +                 KGTPF T D G    LT WEQ
Subjt:  ADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPF-TEDLGIYNRLTWWEQ

Query:  IDFGKQALSYLKY
        +D+G Q  S  K+
Subjt:  IDFGKQALSYLKY

Q9CPZ6 ORM1-like protein 31.8e-0428.03Show/hide
Query:  ADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPF-TEDLGIYNRLTWWEQ
        +++N NT      G+W +Y+L +    +++LS+   S  + W + NL H     +L +Y  +                 KGTPF T D G    LT WEQ
Subjt:  ADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPF-TEDLGIYNRLTWWEQ

Query:  IDFGKQALSYLKYMKPIYESINSITYVVLVYI
        +D+G Q  +  K++        +IT +VL ++
Subjt:  IDFGKQALSYLKYMKPIYESINSITYVVLVYI

Arabidopsis top hitse value%identityAlignment
AT1G01230.1 ORMDL family protein1.6e-3556.45Show/hide
Query:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG
        MANLYVKA+PP D+NRNTEWF+YPGVWTTY+LILFF W+++LS+ GCSPGM W VVNL+HF  T   S + M                  KGTPF +D G
Subjt:  MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLG

Query:  IYNRLTWWEQIDFGKQALSYLKYM
        IYN LTWWEQ+D G+Q     K++
Subjt:  IYNRLTWWEQIDFGKQALSYLKYM

AT5G42000.1 ORMDL family protein5.6e-3352.89Show/hide
Query:  LYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLGIYN
        +YV+A+P  D+NRNTEWF YPGVWTTYILILFF+W+L+LS+F CSPG+ W +V+L+HF  T     +K                   KGTPF +D G+YN
Subjt:  LYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLGIYN

Query:  RLTWWEQIDFGKQALSYLKYM
        RLTWWEQID GKQ     K++
Subjt:  RLTWWEQIDFGKQALSYLKYM

AT5G42000.2 ORMDL family protein5.6e-3352.89Show/hide
Query:  LYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLGIYN
        +YV+A+P  D+NRNTEWF YPGVWTTYILILFF+W+L+LS+F CSPG+ W +V+L+HF  T     +K                   KGTPF +D G+YN
Subjt:  LYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLGIYN

Query:  RLTWWEQIDFGKQALSYLKYM
        RLTWWEQID GKQ     K++
Subjt:  RLTWWEQIDFGKQALSYLKYM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATCTATATGTGAAGGCTATACCTCCGGCGGATCTGAATCGAAACACAGAATGGTTTCTGTATCCTGGTGTTTGGACGACCTATATTCTAATTTTGTTCTTCGC
TTGGATTCTAATTCTATCTTTGTTTGGCTGCTCACCTGGAATGGGCTGGATCGTCGTTAATCTTTCTCATTTTGCTTTTACATGCTCTCTGTCTTTATATAAAATGATAG
AAATGTGTGTCTCTTGCTTCAGGTCACTTGCCACTTCTTCCATTGTTAGAAAAGGGACACCATTTACTGAAGACCTGGGGATCTACAACAGGTTGACTTGGTGGGAGCAG
ATTGATTTTGGAAAGCAGGCACTCTCATATCTCAAATACATGAAGCCCATATACGAAAGCATAAACTCAATTACATATGTTGTCTTAGTTTATATAGTGTTCGGGCAGCG
AGATTCCCGACTAAGTAATCATGGGGCATCAAAGGCTAATTTACTAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATCTATATGTGAAGGCTATACCTCCGGCGGATCTGAATCGAAACACAGAATGGTTTCTGTATCCTGGTGTTTGGACGACCTATATTCTAATTTTGTTCTTCGC
TTGGATTCTAATTCTATCTTTGTTTGGCTGCTCACCTGGAATGGGCTGGATCGTCGTTAATCTTTCTCATTTTGCTTTTACATGCTCTCTGTCTTTATATAAAATGATAG
AAATGTGTGTCTCTTGCTTCAGGTCACTTGCCACTTCTTCCATTGTTAGAAAAGGGACACCATTTACTGAAGACCTGGGGATCTACAACAGGTTGACTTGGTGGGAGCAG
ATTGATTTTGGAAAGCAGGCACTCTCATATCTCAAATACATGAAGCCCATATACGAAAGCATAAACTCAATTACATATGTTGTCTTAGTTTATATAGTGTTCGGGCAGCG
AGATTCCCGACTAAGTAATCATGGGGCATCAAAGGCTAATTTACTAACATAA
Protein sequenceShow/hide protein sequence
MANLYVKAIPPADLNRNTEWFLYPGVWTTYILILFFAWILILSLFGCSPGMGWIVVNLSHFAFTCSLSLYKMIEMCVSCFRSLATSSIVRKGTPFTEDLGIYNRLTWWEQ
IDFGKQALSYLKYMKPIYESINSITYVVLVYIVFGQRDSRLSNHGASKANLLT