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Sed0002119 (gene) of Chayote v1 genome

Gene IDSed0002119
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:31460380..31461542
RNA-Seq ExpressionSed0002119
SyntenySed0002119
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587646.1 hypothetical protein SDJN03_16211, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4355.65Show/hide
Query:  MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQ----HADDSA---------KEELLKILEEADASI
        ME CI  S KR+R+ESN+S FNF+GSK+LR DS E + ISPD D    D  + S SS+AESI SKQ    H++DS          +E+LLKIL+EAD SI
Subjt:  MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQ----HADDSA---------KEELLKILEEADASI

Query:  DRDSAIQDLDSVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAE------------FEDEVSGCCWLENLSSENESNQAEE
        DR+ AI DLDSVI SFE+EI VP   VQPELGYLLEASDDELGLPPA   GE+  E VNF  +            FEDEV   CWLENLSSE E N+ EE
Subjt:  DRDSAIQDLDSVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAE------------FEDEVSGCCWLENLSSENESNQAEE

Query:  EVVELPS----------SPPPYRSETMYCL
        EV  L              PPYRSETM+CL
Subjt:  EVVELPS----------SPPPYRSETMYCL

KAG7021606.1 hypothetical protein SDJN02_15332, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4356.09Show/hide
Query:  MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQ----HADDSA---------KEELLKILEEADASI
        ME CI  S KR+R+ESN+S FNF+GSK+LR DS E + ISPD D    D  + S SS+AESI SKQ    H++DS          +E+LLKILEEAD SI
Subjt:  MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQ----HADDSA---------KEELLKILEEADASI

Query:  DRDSAIQDLDSVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAE------------FEDEVSGCCWLENLSSENESNQAEE
        DR+ AI DLDSVI SFE+EI VP   VQPELGYLLEASDDELGLPPA   GE+  E VNF  +            FEDEV   CWLENLSSE E N+ EE
Subjt:  DRDSAIQDLDSVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAE------------FEDEVSGCCWLENLSSENESNQAEE

Query:  EVVELPS----------SPPPYRSETMYCL
        EV  L              PPYRSETM+CL
Subjt:  EVVELPS----------SPPPYRSETMYCL

KAG7023238.1 hypothetical protein SDJN02_14263, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-3856.16Show/hide
Query:  MEACIHSSNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDS
        MEAC+  S KRLR+ES DS FNFIG  SK +RLDS  LD+          D  I+S SS+A+SIDS Q   +  +++LLKIL++ DA IDR+S IQDLDS
Subjt:  MEACIHSSNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDS

Query:  VIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAEF------------EDE-VSGCCWLENLSSENESNQAEEEVVEL-----
        VIRSFE+EIQVP   VQPELG+LLEASDDELGLPPAG+  + E EAVNFAAEF            EDE V   CWLENL SENE N+ EEE V +     
Subjt:  VIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAEF------------EDE-VSGCCWLENLSSENESNQAEEEVVEL-----

Query:  ----PSSPPPYRSETMYCL
             ++   YRSETM CL
Subjt:  ----PSSPPPYRSETMYCL

XP_022921385.1 uncharacterized protein LOC111429674 [Cucurbita moschata]1.7e-3856.62Show/hide
Query:  MEACIHSSNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDS
        MEAC+  S KRLR+ESNDS FNFIG  SK +RLDS  LD+          D  I+S SS+A+SIDS Q   +  +++LLKIL++ DA IDR+S IQDLDS
Subjt:  MEACIHSSNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDS

Query:  VIRSFEEEIQVPV---QPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAEF------------EDE-VSGCCWLENLSSENESNQAEEEVVEL-----
        VIRSFE+EIQVPV   QPELG+LLEASDDELGLPPAG+  + E EAVNFAAEF            EDE V   CWLENL SENE N+ EEE V +     
Subjt:  VIRSFEEEIQVPV---QPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAEF------------EDE-VSGCCWLENLSSENESNQAEEEVVEL-----

Query:  ----PSSPPPYRSETMYCL
             ++   YRSETM CL
Subjt:  ----PSSPPPYRSETMYCL

XP_023531746.1 uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo]3.0e-4355.22Show/hide
Query:  MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQ----HADDSA---------KEELLKILEEADASI
        ME CI  S KR+R+ESN+S FNF+GSK+LR DS E + ISPD D    D  + S SS+AESI SKQ    H++DS          +E+LLKIL+EAD SI
Subjt:  MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQ----HADDSA---------KEELLKILEEADASI

Query:  DRDSAIQDLDSVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAE------------FEDEVSGCCWLENLSSENESNQAEE
        DR+ AI DLDSVI SFE+EI VP   VQPELGYLLEASDDELGLPPA   GE+  E VNF  +            FEDEV   CWLENLSSE E N++E+
Subjt:  DRDSAIQDLDSVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAE------------FEDEVSGCCWLENLSSENESNQAEE

Query:  EVVELPS----------SPPPYRSETMYCL
        EV  L              PPYRSETM+CL
Subjt:  EVVELPS----------SPPPYRSETMYCL

TrEMBL top hitse value%identityAlignment
A0A0A0LS21 Uncharacterized protein6.1e-2648.6Show/hide
Query:  SNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEE
        S KRLR++SNDS FN IG  SK LRL+         +P   + D  +S       S DS  H+  + +E+LLKIL++ DASIDR++ IQDLDSVIRSFE+
Subjt:  SNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEE

Query:  EIQVP-------VQPELGYLLEASDDELGLPP-AGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENE--SNQAEEEVVEL----------P
        EI+VP       VQPELG+LLEASDDELGLPP AG+  EIE      +  V     FEDE VS  CW +NL  E +  S + EEEVV L           
Subjt:  EIQVP-------VQPELGYLLEASDDELGLPP-AGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENE--SNQAEEEVVEL----------P

Query:  SSPPPYRSETMYCL
          P  YRSE M CL
Subjt:  SSPPPYRSETMYCL

A0A1S3BWV1 uncharacterized protein LOC1034943337.2e-2748.85Show/hide
Query:  MEACIHSSNKRLRNESN-DSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLD
        ME C+  + KRLR++SN DS FN IG  SK LRL+           +P D     + D+  ++S DS Q +  + +E+LLKIL++ DASIDR++AIQDLD
Subjt:  MEACIHSSNKRLRNESN-DSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLD

Query:  SVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENES--NQAEEEVVEL--------
        SVIRSFE+EI+VP   VQPELG+LLEASDDELGLPPAG+  EIE      +  V     FEDE VS  CW +NL  E +    + EEEVV L        
Subjt:  SVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENES--NQAEEEVVEL--------

Query:  --PSSPPPYRSETMYCL
             P  YRSE M CL
Subjt:  --PSSPPPYRSETMYCL

A0A5A7UZW3 Uncharacterized protein7.2e-2748.85Show/hide
Query:  MEACIHSSNKRLRNESN-DSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLD
        ME C+  + KRLR++SN DS FN IG  SK LRL+           +P D     + D+  ++S DS Q +  + +E+LLKIL++ DASIDR++AIQDLD
Subjt:  MEACIHSSNKRLRNESN-DSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLD

Query:  SVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENES--NQAEEEVVEL--------
        SVIRSFE+EI+VP   VQPELG+LLEASDDELGLPPAG+  EIE      +  V     FEDE VS  CW +NL  E +    + EEEVV L        
Subjt:  SVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENES--NQAEEEVVEL--------

Query:  --PSSPPPYRSETMYCL
             P  YRSE M CL
Subjt:  --PSSPPPYRSETMYCL

A0A5D3DXI3 Uncharacterized protein2.5e-2749.31Show/hide
Query:  MEACIHSSNKRLRNESN-DSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLD
        ME C+  + KRLR++SN DS FN IG  SK LRL+           +P D     + D+  ++S DS Q +  + +E+LLKIL++ DASIDR++AIQDLD
Subjt:  MEACIHSSNKRLRNESN-DSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLD

Query:  SVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENE--SNQAEEEVVEL--------
        SVIRSFE+EI+VP   VQPELG+LLEASDDELGLPPAG+  EIE      +  V     FEDE VS  CW +NL  E +  S + EEEVV L        
Subjt:  SVIRSFEEEIQVP---VQPELGYLLEASDDELGLPPAGKSGEIE------AEAVNFAAEFEDE-VSGCCWLENLSSENE--SNQAEEEVVEL--------

Query:  --PSSPPPYRSETMYCL
             P  YRSE M CL
Subjt:  --PSSPPPYRSETMYCL

A0A6J1E5H5 uncharacterized protein LOC1114296748.2e-3956.62Show/hide
Query:  MEACIHSSNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDS
        MEAC+  S KRLR+ESNDS FNFIG  SK +RLDS  LD+          D  I+S SS+A+SIDS Q   +  +++LLKIL++ DA IDR+S IQDLDS
Subjt:  MEACIHSSNKRLRNESNDSPFNFIG--SKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDS

Query:  VIRSFEEEIQVPV---QPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAEF------------EDE-VSGCCWLENLSSENESNQAEEEVVEL-----
        VIRSFE+EIQVPV   QPELG+LLEASDDELGLPPAG+  + E EAVNFAAEF            EDE V   CWLENL SENE N+ EEE V +     
Subjt:  VIRSFEEEIQVPV---QPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAEF------------EDE-VSGCCWLENLSSENESNQAEEEVVEL-----

Query:  ----PSSPPPYRSETMYCL
             ++   YRSETM CL
Subjt:  ----PSSPPPYRSETMYCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13360.1 unknown protein3.1e-0637.96Show/hide
Query:  LDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQV-------------PVQPELGYLLEAS
        LD+   D     R    S D +  +S + K+  DD     L  +L+++D     +   QDLDSV++SFE+E+                 QP+LGYLLEAS
Subjt:  LDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQV-------------PVQPELGYLLEAS

Query:  DDELGLPP
        DDELGLPP
Subjt:  DDELGLPP

AT1G13360.2 unknown protein3.1e-0637.96Show/hide
Query:  LDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQV-------------PVQPELGYLLEAS
        LD+   D     R    S D +  +S + K+  DD     L  +L+++D     +   QDLDSV++SFE+E+                 QP+LGYLLEAS
Subjt:  LDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQV-------------PVQPELGYLLEAS

Query:  DDELGLPP
        DDELGLPP
Subjt:  DDELGLPP

AT1G13360.3 unknown protein3.1e-0637.96Show/hide
Query:  LDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQV-------------PVQPELGYLLEAS
        LD+   D     R    S D +  +S + K+  DD     L  +L+++D     +   QDLDSV++SFE+E+                 QP+LGYLLEAS
Subjt:  LDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQV-------------PVQPELGYLLEAS

Query:  DDELGLPP
        DDELGLPP
Subjt:  DDELGLPP

AT3G25870.1 unknown protein9.0e-0638.1Show/hide
Query:  SNAESIDSKQHAD--DSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQV--------PVQPELGYLLEASDDELGLPP
        +  +S+ +K+  D  D    ++ ++ ++       D   QDLDSV++SFE E+            QP+LGYL EASDDELGLPP
Subjt:  SNAESIDSKQHAD--DSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQV--------PVQPELGYLLEASDDELGLPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCTGCATTCACAGCAGCAACAAGCGACTACGCAACGAATCCAACGATTCTCCATTCAATTTCATCGGATCCAAGCTCCTCCGCCTCGATTCCGACGAACTAGA
TCTCATCTCGCCGGATCCGGATCCGGACGATCGCGATCCACAGATCAGTTCCGATTCGTCGAATGCGGAATCGATCGATTCGAAACAGCACGCCGATGATTCAGCCAAGG
AAGAACTACTGAAGATTCTCGAAGAAGCCGACGCTTCAATTGATCGCGATTCGGCGATTCAAGATCTGGATTCCGTGATCAGAAGCTTCGAGGAGGAGATTCAAGTTCCG
GTGCAGCCGGAACTCGGATACCTTCTAGAAGCGTCCGATGACGAATTAGGCCTTCCGCCGGCCGGAAAGAGCGGAGAAATCGAGGCCGAGGCTGTGAATTTTGCGGCGGA
ATTTGAGGATGAGGTTTCTGGTTGCTGTTGGCTGGAGAATTTGAGCAGTGAGAATGAATCGAATCAGGCGGAGGAAGAGGTGGTGGAGTTGCCGTCGTCTCCGCCGCCGT
ATCGGTCGGAGACGATGTACTGTTTATAA
mRNA sequenceShow/hide mRNA sequence
CCGATATTTAAGTGCCAGTTCTTGCCTCTTCCAAATCACGAACTCTCTCTCCCTCTGTTCATTGATATTTTGCTTTCTCTTTTGTAATTAATTTTCCCCAACTTCTCTGC
AATTCTTATCTTCTCTTTGAATTCATCCATTTCTGTATAATCGTTCGTCTCTCTGATGGAAGCCTGCATTCACAGCAGCAACAAGCGACTACGCAACGAATCCAACGATT
CTCCATTCAATTTCATCGGATCCAAGCTCCTCCGCCTCGATTCCGACGAACTAGATCTCATCTCGCCGGATCCGGATCCGGACGATCGCGATCCACAGATCAGTTCCGAT
TCGTCGAATGCGGAATCGATCGATTCGAAACAGCACGCCGATGATTCAGCCAAGGAAGAACTACTGAAGATTCTCGAAGAAGCCGACGCTTCAATTGATCGCGATTCGGC
GATTCAAGATCTGGATTCCGTGATCAGAAGCTTCGAGGAGGAGATTCAAGTTCCGGTGCAGCCGGAACTCGGATACCTTCTAGAAGCGTCCGATGACGAATTAGGCCTTC
CGCCGGCCGGAAAGAGCGGAGAAATCGAGGCCGAGGCTGTGAATTTTGCGGCGGAATTTGAGGATGAGGTTTCTGGTTGCTGTTGGCTGGAGAATTTGAGCAGTGAGAAT
GAATCGAATCAGGCGGAGGAAGAGGTGGTGGAGTTGCCGTCGTCTCCGCCGCCGTATCGGTCGGAGACGATGTACTGTTTATAATGAAATGGATTGTACTGTTTATAATA
ACATTCAAGAATTGAAAAAAAAAAAAAAAAACTGGAATTTCTTTTTAAGAACAGGGGAAAGAAAAATGACTACACAGAACTTGCGTTGACTGATGTTTCGCACTTTGATT
CTGTCATTTGAAAAAGTACTTATTTTCTGCATTTTAAAAATATGCTAAATTTTTAATTTTGTATTTGTGACGTGAAGAAAGTTGTAATTTACTTAGTTTTTATGTTTAGA
TAAATTTAGAATTCAGTCTTTGTAATTAAAGACACTCAAATTTAGTTTTTAAATATGGTTTTTATTATTTGTAATTATTATGGAATGGGTTGAGGCGATTAGTTATTGTT
AGTTTATTTTTACTCTACCATCTTATGTTCGATCTTTTGTAGTATATATAATCCTCATTTCCC
Protein sequenceShow/hide protein sequence
MEACIHSSNKRLRNESNDSPFNFIGSKLLRLDSDELDLISPDPDPDDRDPQISSDSSNAESIDSKQHADDSAKEELLKILEEADASIDRDSAIQDLDSVIRSFEEEIQVP
VQPELGYLLEASDDELGLPPAGKSGEIEAEAVNFAAEFEDEVSGCCWLENLSSENESNQAEEEVVELPSSPPPYRSETMYCL