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Sed0002139 (gene) of Chayote v1 genome

Gene IDSed0002139
OrganismSechium edule (Chayote v1)
DescriptionS-protein homolog
Genome locationLG09:26828122..26828579
RNA-Seq ExpressionSed0002139
SyntenySed0002139
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458036.1 PREDICTED: pumilio homolog 15-like [Cucumis melo]5.2e-5072.14Show/hide
Query:  FKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL----------RAMD-----KHYSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKT
        FK Q LVFL VS LA+A SKPLS   WEIHIKNGL          ++ D     +  STGAEFKWNFKVNIWDTTLFWCYL KPNG+E+ FDAFWVEKKT
Subjt:  FKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL----------RAMD-----KHYSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKT

Query:  EWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLP
        EWLRVKCD NICNWT EDNGIYLKDNS N DEFIHYWK P
Subjt:  EWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLP
XP_011659760.2 S-protein homolog 74-like [Cucumis sativus]6.3e-4871.01Show/hide
Query:  FKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAM------------DKHYSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKT
        FK Q LVFL VS LA+A SKPLS   WEIHIKNGL   +A+            ++  STGAEFKWNFKVNIWDTTLFWCYL KPNG+++ FDAFWVEKKT
Subjt:  FKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAM------------DKHYSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKT

Query:  EWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWK
        EWLRVKCD NICNW AEDNGIYLKDNS N +EFIHYWK
Subjt:  EWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWK
XP_022960229.1 S-protein homolog 74-like [Cucurbita moschata]2.2e-4868.09Show/hide
Query:  KKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTE
        K Q LVFL  S LA+A+SKP S   WEIHIKN L   +AM  H             +TG EFKW+FKVN WDTTLFWCYL KPNG+EM FDAFWVEK+TE
Subjt:  KKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTE

Query:  WLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGN
        WLRVKCD NICNWTAEDNGIYLKDNSEN+DEF+HYWK P +
Subjt:  WLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGN
XP_023005087.1 S-protein homolog 74-like [Cucurbita maxima]3.7e-4865.96Show/hide
Query:  KKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTE
        K Q LVF+  S LA+A+SKP S   WEIHIKNGL   +AM  H             +T  EFKW+FKVN+WDTTL+WCYL KPNG+EM FD+FWVEK+T+
Subjt:  KKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTE

Query:  WLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGN
        WLRVKCDDNICNWTAEDNGIYLKDNSEN+DEF+HYWK P +
Subjt:  WLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGN
XP_023515021.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]1.7e-4868.09Show/hide
Query:  KKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGLR---AMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTE
        K Q LVFL  S LA+A+SKP S   WEIHIKN L+   AM  H             +TG EFKW+FKVN WDTTLFWCYL KPNG+EM FDAFWVEK+TE
Subjt:  KKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGLR---AMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTE

Query:  WLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGN
        WLRVKCD NICNWTAEDNGIYLKDNSEN+DEF+HYWK P +
Subjt:  WLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGN
TrEMBL top hitse value%identityAlignment
A0A0A0K6N8 S-protein homolog7.0e-4568.12Show/hide
Query:  FKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKT
        FK Q LVFL VS LA+  SKPLS   WEIHIKNGL   +A+  H             STGAEFKWNFKVNIWDTTLFWCYL KP G+++ F+AFWVEKKT
Subjt:  FKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKT

Query:  EWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWK
         WLRVKCD NICNW AED GIYLKDNS N DE IHYWK
Subjt:  EWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWK
A0A1S3C711 S-protein homolog2.5e-5072.14Show/hide
Query:  FKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL----------RAMD-----KHYSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKT
        FK Q LVFL VS LA+A SKPLS   WEIHIKNGL          ++ D     +  STGAEFKWNFKVNIWDTTLFWCYL KPNG+E+ FDAFWVEKKT
Subjt:  FKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL----------RAMD-----KHYSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKT

Query:  EWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLP
        EWLRVKCD NICNWT EDNGIYLKDNS N DEFIHYWK P
Subjt:  EWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLP
A0A5D3E4D8 S-protein homolog2.5e-5072.14Show/hide
Query:  FKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL----------RAMD-----KHYSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKT
        FK Q LVFL VS LA+A SKPLS   WEIHIKNGL          ++ D     +  STGAEFKWNFKVNIWDTTLFWCYL KPNG+E+ FDAFWVEKKT
Subjt:  FKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL----------RAMD-----KHYSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKT

Query:  EWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLP
        EWLRVKCD NICNWT EDNGIYLKDNS N DEFIHYWK P
Subjt:  EWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLP
A0A6J1HAC3 S-protein homolog1.1e-4868.09Show/hide
Query:  KKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTE
        K Q LVFL  S LA+A+SKP S   WEIHIKN L   +AM  H             +TG EFKW+FKVN WDTTLFWCYL KPNG+EM FDAFWVEK+TE
Subjt:  KKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTE

Query:  WLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGN
        WLRVKCD NICNWTAEDNGIYLKDNSEN+DEF+HYWK P +
Subjt:  WLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGN
A0A6J1KS80 S-protein homolog1.8e-4865.96Show/hide
Query:  KKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTE
        K Q LVF+  S LA+A+SKP S   WEIHIKNGL   +AM  H             +T  EFKW+FKVN+WDTTL+WCYL KPNG+EM FD+FWVEK+T+
Subjt:  KKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGL---RAMDKH------------YSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTE

Query:  WLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGN
        WLRVKCDDNICNWTAEDNGIYLKDNSEN+DEF+HYWK P +
Subjt:  WLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGN
SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 13.3e-0735.06Show/hide
Query:  FKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTEWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKL
        F WNF  N+  +T FWCY++K NG+ M  + FW +     L  +C    C WTA+ +G+YL +++   D     W++
Subjt:  FKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTEWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKL
Q2HQ46 S-protein homolog 741.1e-0738.16Show/hide
Query:  FKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTEWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWK
        F WNF  N+  +TLFWCY+ K +G+ M    FW +     L  +CD   C WTA+++G+YL +++   D     WK
Subjt:  FKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTEWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWK
Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 12.3e-0835.06Show/hide
Query:  FKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTEWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKL
        F WNF  N+  +T FWCY++K NG+ M  + FW +     L  +C    C WTA+ +G+YL +++   D     W++
Subjt:  FKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTEWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWKL
AT4G29035.1 Plant self-incompatibility protein S1 family8.0e-0938.16Show/hide
Query:  FKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTEWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWK
        F WNF  N+  +TLFWCY+ K +G+ M    FW +     L  +CD   C WTA+++G+YL +++   D     WK
Subjt:  FKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTEWLRVKCDDNICNWTAEDNGIYLKDNSENIDEFIHYWK
AT5G04047.1 Plant self-incompatibility protein S1 family2.0e-0427.17Show/hide
Query:  WNFKVNIWDTTLFWC-------YLHKPNGNEMIFDAFWVEKKTEWLRVKC---DDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGNNLKK
        W  K  ++  TL WC       Y+H    N  I        K  ++   C     NIC W A+++GIY+++N+    + ++ W     N+KK
Subjt:  WNFKVNIWDTTLFWC-------YLHKPNGNEMIFDAFWVEKKTEWLRVKC---DDNICNWTAEDNGIYLKDNSENIDEFIHYWKLPGNNLKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTCAAGAAGCAACATTTAGTTTTTCTAAAAGTCTCGATCTTGGCCGTGGCTAGCTCCAAGCCATTAAGCGGCCGCGGATGGGAGATCCACATTAAGAATGGATT
GAGAGCAATGGACAAGCACTATTCCACAGGGGCCGAGTTCAAATGGAACTTTAAAGTGAACATTTGGGATACCACATTGTTTTGGTGTTATTTGCACAAGCCGAATGGAA
ATGAAATGATATTCGACGCCTTTTGGGTTGAGAAGAAGACTGAATGGTTGCGTGTCAAATGCGACGATAACATTTGCAATTGGACTGCAGAAGACAATGGAATTTATCTC
AAAGATAACAGTGAAAATATTGATGAGTTCATTCATTACTGGAAACTTCCTGGAAATAATTTGAAAAAAAATGATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTCAAGAAGCAACATTTAGTTTTTCTAAAAGTCTCGATCTTGGCCGTGGCTAGCTCCAAGCCATTAAGCGGCCGCGGATGGGAGATCCACATTAAGAATGGATT
GAGAGCAATGGACAAGCACTATTCCACAGGGGCCGAGTTCAAATGGAACTTTAAAGTGAACATTTGGGATACCACATTGTTTTGGTGTTATTTGCACAAGCCGAATGGAA
ATGAAATGATATTCGACGCCTTTTGGGTTGAGAAGAAGACTGAATGGTTGCGTGTCAAATGCGACGATAACATTTGCAATTGGACTGCAGAAGACAATGGAATTTATCTC
AAAGATAACAGTGAAAATATTGATGAGTTCATTCATTACTGGAAACTTCCTGGAAATAATTTGAAAAAAAATGATATTTGA
Protein sequenceShow/hide protein sequence
MVFKKQHLVFLKVSILAVASSKPLSGRGWEIHIKNGLRAMDKHYSTGAEFKWNFKVNIWDTTLFWCYLHKPNGNEMIFDAFWVEKKTEWLRVKCDDNICNWTAEDNGIYL
KDNSENIDEFIHYWKLPGNNLKKNDI