CuGenDBv2

Gene ID	Sed0002151
Organism	Sechium edule (Chayote v1)
Description	Protein Ycf2
Genome location	LG02:50270013..50270369
RNA-Seq Expression	Sed0002151
Synteny	Sed0002151
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QJA16206.1 Ycf2 [Siraitia grosvenorii]

7.9e-55

94.87

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYEQYESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

YP_009751528.1 Ycf2 protein [Thladiantha dubia]

7.9e-55

94.87

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYEQYESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

YP_009751696.1 Ycf2 protein [Hodgsonia heteroclita]

7.9e-55

94.87

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYEQYESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

YP_009751949.1 Ycf2 protein [Cyclanthera pedata]

7.9e-55

94.87

Show/hide

Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYEQYESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

YP_009945458.1 Ycf2 [Sechium edule]

7.9e-55

94.87

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYEQYESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

TrEMBL top hits

e value

%identity

Alignment

A0A6H0EQH0 Protein Ycf2

3.8e-55

94.87

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYEQYESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

A0A6H0ERQ9 Protein Ycf2

3.8e-55

94.87

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYEQYESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

A0A6H0ESN1 Protein Ycf2

3.8e-55

94.87

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYEQYESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

A0A6M3RTW0 Protein Ycf2

3.8e-55

94.87

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYEQYESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

A0A6M3RVM4 Protein Ycf2

3.8e-55

94.87

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSVVQDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLL     NPLDMIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYEQYESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

SwissProt top hits

e value

%identity

Alignment

A0A379 Protein Ycf2

4.1e-54

88.79

Show/hide

Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSV QDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGAL+GSSRTEKDCS+FDNDRVTLLL     NPLDM+Q+GSCSI+DQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEG
        RFLYE+YESEFEEGEG
Subjt:  RFLYEQYESEFEEGEG

A6MM80 Protein Ycf2

2.4e-54

89.66

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSV QDLW LPGPDEKN ITSYGLVENDSDLVHGLLEVEGAL+GSSRTEKDCS+FDNDRVTLLL +   NPLDM+QNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEG
        RFLYE+YESEFEEGEG
Subjt:  RFLYEQYESEFEEGEG

Q09FY5 Protein Ycf2

2.4e-54

88.79

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSV QDLW LPGPDEKNGITSYG VENDSDLVHGLLEVEG L+GSSRTEKDCS+FDNDRVTLLL +   NPLDM+QNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEG
        RFLYE+YESEFEEGEG
Subjt:  RFLYEQYESEFEEGEG

Q0ZIV6 Protein Ycf2

2.4e-54

89.66

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKKLTILLYLLSCSAGSV QDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGAL+GSSRTEKDCS+FDNDRVTLLL     NPLDM+QNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEG
        RFLYE+YESEFEEG G
Subjt:  RFLYEQYESEFEEGEG

Q9B1K6 Protein Ycf2

1.4e-54

88.89

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Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MK LTILLYLLSCSAG+V QDLW LPGPDEKNGITSYGLVENDSDLVHGLLEVEGAL+GSSRTEKDCS+FDNDRVTLLL     NPL+MIQNGSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEGV
        RFLYE+YESEFEEGEGV
Subjt:  RFLYEQYESEFEEGEGV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

1.6e-50

82.76

Show/hide

Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKK TILLYLLSCSAGSV QDLW LP PDEKN ITSYG VENDSDLVHGLLEV+GAL+GSSRTEKDCS+FDNDRVTLL  +   +PL M+Q+GSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEG
        RFLYE+YESEFEEGEG
Subjt:  RFLYEQYESEFEEGEG

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

1.6e-50

82.76

Show/hide

Query:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ
        MKK TILLYLLSCSAGSV QDLW LP PDEKN ITSYG VENDSDLVHGLLEV+GAL+GSSRTEKDCS+FDNDRVTLL  +   +PL M+Q+GSCSIVDQ
Subjt:  MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQ

Query:  RFLYEQYESEFEEGEG
        RFLYE+YESEFEEGEG
Subjt:  RFLYEQYESEFEEGEG

Sequences

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CDS sequence

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ATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTTTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTA
TGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTAGAAGTAGAAGGCGCTCTGTTGGGATCCTCACGGACAGAAAAAGATTGCAGTCGATTTGATAATGATC
GAGTGACATTGCTTCTTCTCGCCCGAACCGTGAATCCCTTAGATATGATACAAAATGGATCTTGTTCTATCGTTGATCAGAGATTTCTCTATGAACAATACGAATCGGAG
TTTGAAGAAGGAGAAGGGGTCCACTGA

mRNA sequence

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Protein sequence

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MKKLTILLYLLSCSAGSVVQDLWFLPGPDEKNGITSYGLVENDSDLVHGLLEVEGALLGSSRTEKDCSRFDNDRVTLLLLARTVNPLDMIQNGSCSIVDQRFLYEQYESE
FEEGEGVH

Sed0002151 (gene) of Chayote v1 genome