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Sed0002154 (gene) of Chayote v1 genome

Gene IDSed0002154
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:2739346..2739803
RNA-Seq ExpressionSed0002154
SyntenySed0002154
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589671.1 hypothetical protein SDJN03_15094, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2968.81Show/hide
Query:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT
        M SSHF+FF LLF   FYLLSV    SPP    S  RPARKYLG+SFSNP+SE+ +VKV E+EFNR  A+ IS N PEYEASI    ELVYH DYHGVTT
Subjt:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT

Query:  HPNPTPKHP
        HPNPTPKHP
Subjt:  HPNPTPKHP

KGN65505.1 hypothetical protein Csa_019778 [Cucumis sativus]2.8e-3070.64Show/hide
Query:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT
        MRSSHFIFFCLLFT FFYL S+D  HSPP L TSE R ARKYLGTSFS+        +V E+EFNR   +  S NTPEYEASI S  ELVYH DYHGVTT
Subjt:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT

Query:  HPNPTPKHP
        HPNPTPKHP
Subjt:  HPNPTPKHP

XP_022921360.1 uncharacterized protein LOC111429652 [Cucurbita moschata]1.5e-2867.89Show/hide
Query:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT
        M SSHF+FF LLF   FYLLSV    SPP    S  RPARKYLG+SFSNP+SE+ +V+V E+EFNR  A+ IS N PEYEASI    ELVYH DYHGVTT
Subjt:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT

Query:  HPNPTPKHP
        HPNPTPKHP
Subjt:  HPNPTPKHP

XP_022987350.1 uncharacterized protein LOC111484929 [Cucurbita maxima]3.8e-2766.06Show/hide
Query:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT
        M SSHF+FF LLF   FYLLSV    SPP    S  RPARKYLG+ FSNP+SE+ +V+V E+E NR  A+ IS N PEYEASI    ELVYH DYHGVTT
Subjt:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT

Query:  HPNPTPKHP
        HPNPTPKHP
Subjt:  HPNPTPKHP

XP_023515382.1 uncharacterized protein LOC111779554 [Cucurbita pepo subsp. pepo]2.2e-2766.06Show/hide
Query:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT
        M SSHF+FF LLF   FYLLSV    SPP       RPARKYLG+SFSNP+SE+ +V+V ++EFNR  A+ IS N PEYEASI    ELVYH DYHGVTT
Subjt:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT

Query:  HPNPTPKHP
        HPNPTPKHP
Subjt:  HPNPTPKHP

TrEMBL top hitse value%identityAlignment
A0A0A0LUD6 Uncharacterized protein1.3e-3070.64Show/hide
Query:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT
        MRSSHFIFFCLLFT FFYL S+D  HSPP L TSE R ARKYLGTSFS+        +V E+EFNR   +  S NTPEYEASI S  ELVYH DYHGVTT
Subjt:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT

Query:  HPNPTPKHP
        HPNPTPKHP
Subjt:  HPNPTPKHP

A0A438GF17 Uncharacterized protein5.9e-1040.37Show/hide
Query:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT
        M+ SH + FC+L TA +  +   HF           R  R+ L  SFSNPK EY +++  +EE  R   ++ S    ++ +S ++++E VYH DYHGV T
Subjt:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT

Query:  HPNPTPKHP
        HP PTPKHP
Subjt:  HPNPTPKHP

A0A5D3DYI5 Uncharacterized protein3.4e-2671.91Show/hide
Query:  VDHFHSPPHLLTSEERPARKYLGTSFSN-PKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTTHPNPTPKHP
        +D  HSPP L TSE RPARKYLGTSFSN PKSEYH  +V E+EFNR   + +S NTPE+EASI S  EL+YH DYHGVTTHPNPTPKHP
Subjt:  VDHFHSPPHLLTSEERPARKYLGTSFSN-PKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTTHPNPTPKHP

A0A6J1E5F1 uncharacterized protein LOC1114296527.4e-2967.89Show/hide
Query:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT
        M SSHF+FF LLF   FYLLSV    SPP    S  RPARKYLG+SFSNP+SE+ +V+V E+EFNR  A+ IS N PEYEASI    ELVYH DYHGVTT
Subjt:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT

Query:  HPNPTPKHP
        HPNPTPKHP
Subjt:  HPNPTPKHP

A0A6J1JGL7 uncharacterized protein LOC1114849291.8e-2766.06Show/hide
Query:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT
        M SSHF+FF LLF   FYLLSV    SPP    S  RPARKYLG+ FSNP+SE+ +V+V E+E NR  A+ IS N PEYEASI    ELVYH DYHGVTT
Subjt:  MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTT

Query:  HPNPTPKHP
        HPNPTPKHP
Subjt:  HPNPTPKHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCCTCACATTTTATTTTCTTTTGCCTTCTCTTTACTGCCTTCTTCTATCTTCTTTCAGTGGATCATTTTCATTCTCCCCCTCATCTTTTAACCTCTGAAGAAAG
ACCTGCAAGAAAGTACCTTGGTACATCATTTTCCAATCCCAAATCTGAATATCACAGAGTCAAGGTTCGTGAAGAAGAGTTCAATAGACTGCCTGCAGAGAAAATTTCCT
TCAACACACCTGAATATGAAGCAAGTATCAAGAGTGCGGATGAACTTGTCTACCACACTGACTATCACGGGGTGACAACGCATCCGAATCCAACGCCCAAACATCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATCCTCACATTTTATTTTCTTTTGCCTTCTCTTTACTGCCTTCTTCTATCTTCTTTCAGTGGATCATTTTCATTCTCCCCCTCATCTTTTAACCTCTGAAGAAAG
ACCTGCAAGAAAGTACCTTGGTACATCATTTTCCAATCCCAAATCTGAATATCACAGAGTCAAGGTTCGTGAAGAAGAGTTCAATAGACTGCCTGCAGAGAAAATTTCCT
TCAACACACCTGAATATGAAGCAAGTATCAAGAGTGCGGATGAACTTGTCTACCACACTGACTATCACGGGGTGACAACGCATCCGAATCCAACGCCCAAACATCCATAG
Protein sequenceShow/hide protein sequence
MRSSHFIFFCLLFTAFFYLLSVDHFHSPPHLLTSEERPARKYLGTSFSNPKSEYHRVKVREEEFNRLPAEKISFNTPEYEASIKSADELVYHTDYHGVTTHPNPTPKHP