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Sed0002164 (gene) of Chayote v1 genome

Gene IDSed0002164
OrganismSechium edule (Chayote v1)
DescriptionSmall VCP/p97-interacting protein
Genome locationLG10:19081755..19084923
RNA-Seq ExpressionSed0002164
SyntenySed0002164
Gene Ontology termsNA
InterPro domainsIPR031632 - Small VCP/p97-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020610.1 hypothetical protein SDJN02_17296 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2181.33Show/hide
Query:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
        MGQC SCLDE +KQQRKEEERLAS+EAR+KAAEAAQ+R+E+FEK+ AGRAARAQ+AANAKQSAN NKG+PVLK S
Subjt:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
KAG7029301.1 hypothetical protein SDJN02_07639, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-2649.11Show/hide
Query:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLK---------------------------
        MGQCASCLDEG++Q+RKEEERLAS+EAR KAAEAAQKR+E+FEK+ AGRAARAQ+AANAKQSANTNKG+PVLK                           
Subjt:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLK---------------------------

Query:  -----------------------------------KSGFGGFLLTGKMVCEASFDKSGGLSDEQSLPVI
                                           KSG GGF  T +  C+ SFD SGG SDEQSLP++
Subjt:  -----------------------------------KSGFGGFLLTGKMVCEASFDKSGGLSDEQSLPVI
XP_008444542.1 PREDICTED: uncharacterized protein LOC103487833 [Cucumis melo]4.5e-2384Show/hide
Query:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
        MGQC SCLDEG+KQQRKEEERLAS+EAR KAAEAAQ+R+E+FEK+ AGRAARAQ+AANAKQSANTNKG+PVLK S
Subjt:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
XP_022962383.1 uncharacterized protein LOC111462843 [Cucurbita moschata]4.5e-2384Show/hide
Query:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
        MGQCASCLDEG++Q+RKEEERLAS+EAR KAAEAAQKR+E+FEK+ AGRAARAQ+AANAKQSANTNKG+PVLK S
Subjt:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
XP_038886006.1 uncharacterized protein LOC120076314 [Benincasa hispida]2.0e-2385.33Show/hide
Query:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
        MGQC SCLDEGEKQQRKEEERLAS+EAR KAAEAAQ+R+E+FEK+ AGRAARAQ+AANAKQSANTNKG+PVLK S
Subjt:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
TrEMBL top hitse value%identityAlignment
A0A1S3BAJ0 uncharacterized protein LOC1034878332.2e-2384Show/hide
Query:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
        MGQC SCLDEG+KQQRKEEERLAS+EAR KAAEAAQ+R+E+FEK+ AGRAARAQ+AANAKQSANTNKG+PVLK S
Subjt:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
A0A6J1GGM5 uncharacterized protein LOC1114540285.4e-2281.33Show/hide
Query:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
        MGQC SCLDE +KQQRKEEERLAS+EAR+KAAEAAQ+R+E+FEK+ AGRAARAQ+AANAKQSAN NKG+PVLK S
Subjt:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
A0A6J1HEN1 uncharacterized protein LOC1114628432.2e-2384Show/hide
Query:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
        MGQCASCLDEG++Q+RKEEERLAS+EAR KAAEAAQKR+E+FEK+ AGRAARAQ+AANAKQSANTNKG+PVLK S
Subjt:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
A0A6J1K846 uncharacterized protein LOC1114920132.2e-2384Show/hide
Query:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
        MGQCASCLDEG++Q+RKEEERLAS+EAR KAAEAAQKR+E+FEK+ AGRAARAQ+AANAKQSANTNKG+PVLK S
Subjt:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
A0A6J1KLT2 uncharacterized protein LOC1114964245.4e-2281.33Show/hide
Query:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
        MGQC SCLDE +KQQRKEEERLAS+EAR+KAAEAAQ+R+E+FEK+ AGRAARAQ+AANAKQSAN NKG+PVLK S
Subjt:  MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63905.1 unknown protein1.2e-1871.43Show/hide
Query:  CASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLK
        C SC D  +K+QRKEEER AS EAR KAAEAAQ+RKE F+K+ AGRAA+AQ+   AKQSANTNKG+PVLK
Subjt:  CASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAATGCGCAAGTTGCCTGGACGAAGGCGAAAAGCAACAGAGAAAAGAGGAAGAAAGATTAGCCTCCATTGAAGCTCGCACCAAAGCTGCTGAAGCCGCTCAGAA
AAGGAAAGAAGATTTTGAAAAAACTCCTGCAGGAAGGGCTGCACGTGCTCAGATAGCAGCAAATGCAAAGCAATCTGCTAATACTAACAAGGGACAACCGGTTCTTAAGA
AGTCAGGCTTTGGTGGGTTCCTCCTCACTGGTAAAATGGTATGTGAGGCTTCCTTTGACAAATCAGGAGGCTTGTCTGATGAGCAGTCATTGCCAGTCATTTTGGTTCTT
GACAGATCCCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAATGCGCAAGTTGCCTGGACGAAGGCGAAAAGCAACAGAGAAAAGAGGAAGAAAGATTAGCCTCCATTGAAGCTCGCACCAAAGCTGCTGAAGCCGCTCAGAA
AAGGAAAGAAGATTTTGAAAAAACTCCTGCAGGAAGGGCTGCACGTGCTCAGATAGCAGCAAATGCAAAGCAATCTGCTAATACTAACAAGGGACAACCGGTTCTTAAGA
AGTCAGGCTTTGGTGGGTTCCTCCTCACTGGTAAAATGGTATGTGAGGCTTCCTTTGACAAATCAGGAGGCTTGTCTGATGAGCAGTCATTGCCAGTCATTTTGGTTCTT
GACAGATCCCCGTGA
Protein sequenceShow/hide protein sequence
MGQCASCLDEGEKQQRKEEERLASIEARTKAAEAAQKRKEDFEKTPAGRAARAQIAANAKQSANTNKGQPVLKKSGFGGFLLTGKMVCEASFDKSGGLSDEQSLPVILVL
DRSP