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Sed0002170 (gene) of Chayote v1 genome

Gene IDSed0002170
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S25
Genome locationLG03:3512067..3514419
RNA-Seq ExpressionSed0002170
SyntenySed0002170
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR004977 - Ribosomal protein S25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV70343.1 Ribosomal_S25 domain-containing protein [Cephalotus follicularis]1.2e-4696.3Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PKYKLITPSILSDR+RINGSLARRAI+DLMARG+IRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

KAB1225403.1 40S ribosomal protein S25 [Morella rubra]1.2e-4696.3Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEAPKYKLITPS+LSDR+RINGSLARRAIKDLMARG+IRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_004140903.1 40S ribosomal protein S25-2 [Cucumis sativus]9.5e-4795.37Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PKYKL+TPSILSDRMR+NGSLARRAIKDLMARG+IRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_004291591.1 PREDICTED: 40S ribosomal protein S25-2 [Fragaria vesca subsp. vesca]1.2e-4696.3Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPK+KLITPSILSDR+RINGSLARRAIKDLMARG+IRMISAH+SQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

XP_022953196.1 40S ribosomal protein S25-2 [Cucurbita moschata]1.2e-4696.3Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PKYKLITPSILSDRMRINGSLARRAIKDLMARG+IRMISAHSSQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

TrEMBL top hitse value%identityAlignment
A0A0A0KB40 40S ribosomal protein S254.6e-4795.37Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PKYKL+TPSILSDRMR+NGSLARRAIKDLMARG+IRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A1Q3BRK1 40S ribosomal protein S256.0e-4796.3Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PKYKLITPSILSDR+RINGSLARRAI+DLMARG+IRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6A1WKZ3 40S ribosomal protein S256.0e-4796.3Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEAPKYKLITPS+LSDR+RINGSLARRAIKDLMARG+IRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A6J1GMB9 40S ribosomal protein S256.0e-4796.3Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSE PKYKLITPSILSDRMRINGSLARRAIKDLMARG+IRMISAHSSQ+
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

A0A7J6I112 40S ribosomal protein S257.8e-4797.22Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEAPKYKLITPSILSDR+RINGSLARRAIKDLMARG IRMISAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

SwissProt top hitse value%identityAlignment
P46301 40S ribosomal protein S253.7e-4688.89Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLLSEAPKYKLITPS+LSDR+RI+GSLAR+AI+DLMARG+IRM+SAH+SQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q8GYL5 40S ribosomal protein S25-36.4e-4689.72Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEAPK+KLITPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

Q9SIK2 40S ribosomal protein S25-21.5e-4791.67Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Q9SIW5 40S ribosomal protein S25-11.0e-4386.79Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SEAPK+KLITPSILSDR+RINGSLAR+AI+DLM +G IRM+S HSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRAT
        I TRAT
Subjt:  IYTRAT

Q9T029 40S ribosomal protein S25-41.3e-4689.81Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

Arabidopsis top hitse value%identityAlignment
AT2G21580.1 Ribosomal protein S25 family protein1.1e-4891.67Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT2G21580.2 Ribosomal protein S25 family protein5.9e-4790.74Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G34555.1 Ribosomal protein S25 family protein4.5e-4789.72Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSEAPK+KLITPSILSDR+RINGSLARRAI++LMA+G IRM+SAHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

AT4G39200.1 Ribosomal protein S25 family protein9.1e-4889.81Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT

AT4G39200.2 Ribosomal protein S25 family protein5.0e-4688.89Show/hide
Query:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ
        MAPKK+K PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPK+KLITPSILSDRMRINGSLARRAI++LMA+G IRM++AHSSQQ
Subjt:  MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQ

Query:  IYTRATNT
        IYTRATNT
Subjt:  IYTRATNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGAAGAAGGAGAAGGCTCCGCCACCGTCCTCCAAGCCGGCGAAATCCGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGT
CAACAACATGGTTTTGTTCGACCAAGGAACTTACGATAAGCTTCTTTCCGAAGCTCCCAAGTACAAGCTAATCACTCCTTCCATCCTCTCTGATAGGATGAGGATCAATG
GATCCCTTGCACGAAGGGCCATCAAGGATTTGATGGCCCGAGGTGCGATTAGAATGATATCGGCTCATTCCAGTCAACAGATCTACACCAGAGCAACCAATACCTAA
mRNA sequenceShow/hide mRNA sequence
CCAAAGCTCTGCTTCGTTCCAGCCGAAATCTCTGCAACTTCTTCTCTGAAAACCCTAGAAATCAGATCTCATGGCGCCGAAGAAGGAGAAGGCTCCGCCACCGTCCTCCA
AGCCGGCGAAATCCGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTCGACCAAGGAACTTACGATAAG
CTTCTTTCCGAAGCTCCCAAGTACAAGCTAATCACTCCTTCCATCCTCTCTGATAGGATGAGGATCAATGGATCCCTTGCACGAAGGGCCATCAAGGATTTGATGGCCCG
AGGTGCGATTAGAATGATATCGGCTCATTCCAGTCAACAGATCTACACCAGAGCAACCAATACCTAAACTTAATTTGGTTTCACGTATACCTGGAAGAAGGGTATATAGA
TATGTAGTGTTGCATTTTCATTTTGCAATCCTGAATTTTGTTTTGTGATGATATTAGCCTTTTGGATAATTTCTAAACTTTGTGTTTTTATAATTTGTTAATGTTATTCT
GCTTATGAATCCAGGATTCTAATCACAATGGTCGGGTATCATTAGCGCTGCTAGTTATATATTTATCAAGTGCCATGACATGTTGTAATCATAATATTCTCTTTTGTTTG
GAGTATAATTATGATTCATAAATTATTTAA
Protein sequenceShow/hide protein sequence
MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARRAIKDLMARGAIRMISAHSSQQIYTRATNT