CuGenDBv2

Gene ID	Sed0002176
Organism	Sechium edule (Chayote v1)
Description	mediator of RNA polymerase II transcription subunit 17-like
Genome location	LG08:5254600..5261589
RNA-Seq Expression	Sed0002176
Synteny	Sed0002176
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019313 - Mediator complex, subunit Med17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6587922.1 Mediator of RNA polymerase II transcription subunit 17, partial [Cucurbita argyrosperma subsp. sororia]

0.0e+00

91.55

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLPIKRLE+IEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA
        DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHL KYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFD+SSCDP +
Subjt:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA

Query:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTI VEHD SGMLTINLPPNSCHSLRFGFLSG NVEN LE G NESTNS+NQS+ KSEKEF ND+ YIKETNSLLREVHHAIFSEQVFDLVNRE
Subjt:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQ V+GANT+ILD+ NLPFDSLDGIELPDR D LEKKLRNPNH TFEIYLQ IFH LVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS

Query:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS
        NDR IS  SRQS Q SNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPF+QLISHPTWNSRKSSWTFF+EVPRSILHP S+   +SDS +MN+VTKS
Subjt:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS

Query:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
         FQTKVVVND+CIT+EGEGAPNVV LFK NSKDIYSMNRYGCDLADLPV ILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL
        D QG LSWWLVMDDGLM+DRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFG SL
Subjt:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

XP_022145057.1 mediator of RNA polymerase II transcription subunit 17 [Momordica charantia]

0.0e+00

90.65

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDM+VSLDKLP+KRLE+IEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA
        DAVTVAGMTRPK LPNE LSDLGVSVATKLQCFRHL KYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV AAPAPANEGFTIDLFDNSSCDP +
Subjt:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA

Query:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRV+HDSSGML INLP NSCHS+RFGFLSG NVENPLERGKNESTNSSNQS+IK E EF ND+EYIKETNSLLREVHHAIFSEQVFDLVNRE
Subjt:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQ TSVFISLVPSS+SCQ V+GANTKILD+TNLPFDSLDGIELPDRSD LEKKLRNPNH  FEIYLQ IFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS

Query:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV----SSDSRMNHVTKS
        NDRPIS LSRQ  Q SNDGSGLLGHFCLSLAHRIFAN+VLMELENVVWKVP +QLISHPTWNSRKSSWTFF+EVPRSI+HPN +    S   +M +VTKS
Subjt:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV----SSDSRMNHVTKS

Query:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFQTKVVVNDDCIT+EGEGAPNVVGL KGNSK+IYSMNRYGCDLADLPV ILLQVA QI+LWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL
        DAQG LSWWLVMDD LMEDRKLNFDISDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGFGG L
Subjt:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

XP_022932776.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita moschata]

0.0e+00

91.7

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLPIKRLE+IEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWPWQNMIENLQ AHQELSVIIDLINTVEAN
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA
        DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHL KYFKQSAKGLERQV REARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFD+SSCDP +
Subjt:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA

Query:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRVEHD SGMLTINLPPNSCHSLRFGFLSG NVEN LE GKNESTNS+NQS+ KSEKEF ND+ YIKETNSLLREVHHAIFSEQVFDLVNRE
Subjt:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQ V+GANT+ILD+TNLPFDSLDGIELPDR D LEKKLRNPNH TFEIYLQ IFH LVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS

Query:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS
        NDR IS  SRQS Q SNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPF+QLISHPTWNSRKSSWTFF+EVPRSILHP S+   +SDS +MN VTKS
Subjt:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS

Query:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
         FQTKVVVND+CIT+EGEGAPNVV LFK NSKDIYSMNRYGCDLADLPV ILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL
        D QG LSWWLVMDDGLM+DRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFG SL
Subjt:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

XP_023005226.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]

0.0e+00

91.7

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLPIKRLE+IEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA
        DA+TVAGMTRPKLLPNEALSDLGVSVATKLQCFRHL KYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFD+SSCDP +
Subjt:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA

Query:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRVEHD SGMLTINLPPNSCHSLRFGFLSG NVEN LE G NESTNS+NQS+ KSEKEF ND+ YIKETNSLLRE HHAIFSEQVFDLVNRE
Subjt:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQ V+GANT+ILD+TNLPFDSLDGIELPDR D LEKKLRNPNH TFEIYLQ IFH LVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS

Query:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS
        NDR IS  SRQS Q SNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPF+QLISHPTWNSRKSSWTFF+EVP SILHP S+   +SDS +MN+VTKS
Subjt:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS

Query:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFQTKVVVND+CIT+EGEGAPNVV LFK NSKDIYSMNRYGCDLADLPV ILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL
        DAQG LSWWLVMDDGLM+DRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFG SL
Subjt:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

XP_023530911.1 mediator of RNA polymerase II transcription subunit 17-like [Cucurbita pepo subsp. pepo]

0.0e+00

91.7

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLPIKRLE+IEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA
        DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHL KYFKQSAKGLERQV+REARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFD+SSCDP +
Subjt:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA

Query:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRVEHD SGMLTINLPPNSCHSLRFGFLSG NVEN LE GKNESTNS+NQS+ KSEKEF NDN YIKETNSLLREVHHAIFSEQVFDLVNRE
Subjt:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQ V+GANT+ILD+TNLPFDSLDGIELPDR D LEKKLRNPNH TFEIYLQ IFH LVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS

Query:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS
        NDR IS  SRQS Q SNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPF+QLISHPTWNSRKSSWTFF+EVPRSILHP S+   +SDS +MN+VTKS
Subjt:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS

Query:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
         FQTKVVVND+CIT+EGEGAPNVV LFK NSKDIYSMNRYGCDLADLPV ILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV+PE
Subjt:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL
        D QG LSWWLVMDDGLM+DRKLNFDISDVVPEYRKFLGHLSLEVLH TLMDLVSLCSGFG SL
Subjt:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E2I2 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

89.89

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD D++VSLDKLPIKRLE+IEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA
        DAVTVAGMTRPK LPNE L+DLGVSVATKLQCFRHL KYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV AAPAPANEGFTIDLFDNSSCDP +
Subjt:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA

Query:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRV+HDSSGML INLPPNSCHSLRFGFLSG NVENPLE  KN++TN SNQ+++K EKEF ND+EYIKETNSLLR+VHHAIF EQVFDLVN E
Subjt:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS
        AFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPS QSCQTVEGAN++ILD+ NLPFDSLDGIELPDRSDPLEKKLRNPNH TFEIYLQ IFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS

Query:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS
        NDRPIS LSRQS Q SNDGSGLLGHFCLSLAHR+FANNVLMELENVVWKVPF+QLISHPTWNSRKSSWTFF+EVPRSILHPNS+   +SDS +MN+VTK+
Subjt:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS

Query:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QF TKVVVNDDCIT+EGEGAPNVVGLF GNSKDIY  NRY CDLADLPV ILLQVASQI+LWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL
        D QG LSWWLVMDDGLMEDRKLNF+ SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSG GGSL
Subjt:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

A0A5D3BMZ9 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

89.89

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MD D++VSLDKLPIKRLE+IEENGLERFP+DVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPW WQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA
        DAVTVAGMTRPK LPNE L+DLGVSVATKLQCFRHL KYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV AAPAPANEGFTIDLFDNSSCDP +
Subjt:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA

Query:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRV+HDSSGML INLPPNSCHSLRFGFLSG NVENPLE  KN++TN SNQ+++K EKEF ND+EYIKETNSLLR+VHHAIF EQVFDLVN E
Subjt:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS
        AFNPS+GINVTGIRENYLQLSIDQGTSVFISLVPS QSCQTVEGAN++ILD+ NLPFDSLDGIELPDRSDPLEKKLRNPNH TFEIYLQ IFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS

Query:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS
        NDRPIS LSRQS Q SNDGSGLLGHFCLSLAHR+FANNVLMELENVVWKVPF+QLISHPTWNSRKSSWTFF+EVPRSILHPNS+   +SDS +MN+VTK+
Subjt:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS

Query:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QF TKVVVNDDCIT+EGEGAPNVVGLF GNSKDIY  NRY CDLADLPV ILLQVASQI+LWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL
        D QG LSWWLVMDDGLMEDRKLNF+ SDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSG GGSL
Subjt:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

A0A6J1CVE8 Mediator of RNA polymerase II transcription subunit 17

0.0e+00

90.65

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGDM+VSLDKLP+KRLE+IEENGLERFP DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA
        DAVTVAGMTRPK LPNE LSDLGVSVATKLQCFRHL KYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRV AAPAPANEGFTIDLFDNSSCDP +
Subjt:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA

Query:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRV+HDSSGML INLP NSCHS+RFGFLSG NVENPLERGKNESTNSSNQS+IK E EF ND+EYIKETNSLLREVHHAIFSEQVFDLVNRE
Subjt:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQ TSVFISLVPSS+SCQ V+GANTKILD+TNLPFDSLDGIELPDRSD LEKKLRNPNH  FEIYLQ IFHELVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS

Query:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV----SSDSRMNHVTKS
        NDRPIS LSRQ  Q SNDGSGLLGHFCLSLAHRIFAN+VLMELENVVWKVP +QLISHPTWNSRKSSWTFF+EVPRSI+HPN +    S   +M +VTKS
Subjt:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV----SSDSRMNHVTKS

Query:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFQTKVVVNDDCIT+EGEGAPNVVGL KGNSK+IYSMNRYGCDLADLPV ILLQVA QI+LWLH EALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL
        DAQG LSWWLVMDD LMEDRKLNFDISDVVPEYRKFLG+LSLEVLHSTLMDLVSLCSGFGG L
Subjt:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

A0A6J1EXB9 mediator of RNA polymerase II transcription subunit 17-like

0.0e+00

91.7

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLPIKRLE+IEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWPWQNMIENLQ AHQELSVIIDLINTVEAN
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA
        DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHL KYFKQSAKGLERQV REARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFD+SSCDP +
Subjt:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA

Query:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRVEHD SGMLTINLPPNSCHSLRFGFLSG NVEN LE GKNESTNS+NQS+ KSEKEF ND+ YIKETNSLLREVHHAIFSEQVFDLVNRE
Subjt:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQ V+GANT+ILD+TNLPFDSLDGIELPDR D LEKKLRNPNH TFEIYLQ IFH LVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS

Query:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS
        NDR IS  SRQS Q SNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPF+QLISHPTWNSRKSSWTFF+EVPRSILHP S+   +SDS +MN VTKS
Subjt:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS

Query:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
         FQTKVVVND+CIT+EGEGAPNVV LFK NSKDIYSMNRYGCDLADLPV ILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL
        D QG LSWWLVMDDGLM+DRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFG SL
Subjt:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

A0A6J1KUD0 mediator of RNA polymerase II transcription subunit 17-like

0.0e+00

91.7

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
        MDGD+ VSLDKLPIKRLE+IEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDD+KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEAN

Query:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA
        DA+TVAGMTRPKLLPNEALSDLGVSVATKLQCFRHL KYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFD+SSCDP +
Subjt:  DAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLA

Query:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE
        VFRPSSSTIRVEHD SGMLTINLPPNSCHSLRFGFLSG NVEN LE G NESTNS+NQS+ KSEKEF ND+ YIKETNSLLRE HHAIFSEQVFDLVNRE
Subjt:  VFRPSSSTIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNRE

Query:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS
        AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQ V+GANT+ILD+TNLPFDSLDGIELPDR D LEKKLRNPNH TFEIYLQ IFH LVFVKS
Subjt:  AFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKS

Query:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS
        NDR IS  SRQS Q SNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPF+QLISHPTWNSRKSSWTFF+EVP SILHP S+   +SDS +MN+VTKS
Subjt:  NDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSV---SSDS-RMNHVTKS

Query:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
        QFQTKVVVND+CIT+EGEGAPNVV LFK NSKDIYSMNRYGCDLADLPV ILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE
Subjt:  QFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPE

Query:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL
        DAQG LSWWLVMDDGLM+DRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFG SL
Subjt:  DAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

SwissProt top hits

e value

%identity

Alignment

F4K460 Mediator of RNA polymerase II transcription subunit 17

3.2e-209

59.18

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDE--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE
        MD DME+SLD+LPIKRLESIEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++DE  KKKQKKSSK+S   W W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDE--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDP
        ANDAVTVAGMTRPK +PNE LSDL VS ATKLQ +R+L  YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A+ A +NEGFTIDL D+S  DP
Subjt:  ANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDP

Query:  LAVFRPSS-STIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLV
         + FRPS+ STIRV+HDS+GML IN+P +S +SLRFG++  + + N  E  ++  + + +     SEK   +D++Y+KET+SLLREVH +IF+EQ+FD++
Subjt:  LAVFRPSS-STIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLV

Query:  NREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVF
        NREAFN  +G N++G+REN++++SI QG S+F+SL PS ++       + K  +   L  +S   +E  +  D   KKL  PN T++EIYLQ IFHE  F
Subjt:  NREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVF

Query:  VKSNDRPISVLSRQSVQHSND-GSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSIL---HPNSVSSDSRMNHV
         K+ D+  S   R S Q   D  SGLL HFCLSL HRIF+N VL+ LE+VV KVP++ LISHPTWNSR SSWT F+ VP SI+      + S D + N  
Subjt:  VKSNDRPISVLSRQSVQHSND-GSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSIL---HPNSVSSDSRMNHV

Query:  TKSQFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV
         K+QF+TKVVV DDCI++E E  PNVVGL K +S +++S+N+Y CD+ADLPV IL QVASQIV WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Subjt:  TKSQFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV

Query:  DPEDAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLC
        +PEDA+G +SWWLVM++G  E+R       + V E RK LGHLSL+VL+S LMDL++LC
Subjt:  DPEDAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLC

Arabidopsis top hits

e value

%identity

Alignment

AT5G20170.1 RNA polymerase II transcription mediators

2.3e-210

59.18

Show/hide

Query:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDE--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE
        MD DME+SLD+LPIKRLESIEENG ERFPSDV Y++KR+SLIRRIDFAWA+E++DE  KKKQKKSSK+S   W W+ M+ENLQLAHQEL+VIIDLI+TV+
Subjt:  MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDE--KKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVE

Query:  ANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDP
        ANDAVTVAGMTRPK +PNE LSDL VS ATKLQ +R+L  YFKQSAK LE+++ REARFYGALIRLQ+NWKVKRQR+ A+ A +NEGFTIDL D+S  DP
Subjt:  ANDAVTVAGMTRPKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDP

Query:  LAVFRPSS-STIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLV
         + FRPS+ STIRV+HDS+GML IN+P +S +SLRFG++  + + N  E  ++  + + +     SEK   +D++Y+KET+SLLREVH +IF+EQ+FD++
Subjt:  LAVFRPSS-STIRVEHDSSGMLTINLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLV

Query:  NREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVF
        NREAFN  +G N++G+REN++++SI QG S+F+SL PS ++       + K  +   L  +S   +E  +  D   KKL  PN T++EIYLQ IFHE  F
Subjt:  NREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVF

Query:  VKSNDRPISVLSRQSVQHSND-GSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSIL---HPNSVSSDSRMNHV
         K+ D+  S   R S Q   D  SGLL HFCLSL HRIF+N VL+ LE+VV KVP++ LISHPTWNSR SSWT F+ VP SI+      + S D + N  
Subjt:  VKSNDRPISVLSRQSVQHSND-GSGLLGHFCLSLAHRIFANNVLMELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSIL---HPNSVSSDSRMNHV

Query:  TKSQFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV
         K+QF+TKVVV DDCI++E E  PNVVGL K +S +++S+N+Y CD+ADLPV IL QVASQIV WL EEA T G KA+R+FLSLS E+ +GE + LVAHV
Subjt:  TKSQFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQVASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHV

Query:  DPEDAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLC
        +PEDA+G +SWWLVM++G  E+R       + V E RK LGHLSL+VL+S LMDL++LC
Subjt:  DPEDAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGGCGACATGGAAGTTTCCCTCGACAAGCTTCCCATCAAGCGCTTGGAGTCCATAGAGGAAAACGGCCTCGAGCGATTCCCATCAGATGTAGGTTATGAAGAGAA
ACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATTGAGAAGGACGATGAAAAAAAGAAGCAGAAGAAGAGCTCTAAGGAGAGTTCAACTCCTTGGCCATGGC
AGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTCATCAATACCGTGGAAGCTAATGATGCAGTAACGGTTGCAGGGATGACAAGG
CCAAAACTATTACCTAATGAAGCTTTATCTGATCTTGGAGTGTCTGTAGCAACGAAACTGCAATGCTTTCGACATCTTAGTAAATATTTCAAGCAGTCAGCTAAAGGTTT
GGAACGTCAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTCTTATTCGATTGCAGCAAAATTGGAAGGTTAAAAGACAGCGAGTGGCTGCTGCTCCAGCTCCTGCAAACG
AAGGCTTTACCATTGATTTATTTGACAATTCATCATGTGACCCGTTGGCTGTGTTTCGACCGTCTTCATCTACAATTCGTGTTGAGCATGATTCATCTGGAATGCTGACC
ATTAATTTGCCTCCAAATTCATGTCACTCCCTTCGTTTCGGATTTCTCAGTGGATCTAATGTAGAAAATCCTCTGGAGCGTGGTAAAAATGAGTCCACAAATTCATCCAA
TCAGTCTACAATTAAGAGTGAGAAGGAATTTCCAAATGACAATGAGTACATTAAGGAAACAAACTCACTTCTCCGTGAAGTTCACCATGCCATTTTTAGTGAGCAGGTGT
TTGATTTGGTGAACCGTGAAGCATTCAATCCATCATTAGGTATCAATGTCACTGGCATACGAGAAAATTACTTGCAATTAAGTATCGATCAGGGTACCTCGGTCTTCATC
TCTCTTGTTCCGTCTAGTCAAAGTTGCCAAACAGTTGAAGGTGCAAATACAAAGATTTTGGATGATACAAATTTACCTTTTGATTCACTTGATGGGATTGAATTACCAGA
TAGAAGTGACCCCCTTGAAAAGAAATTGCGGAATCCTAATCATACAACATTTGAGATATATCTGCAACACATTTTCCATGAGCTAGTGTTTGTTAAATCAAACGACAGAC
CCATTTCTGTCTTAAGCAGGCAATCCGTTCAACATTCTAATGATGGATCTGGGCTTCTTGGTCATTTCTGTTTGTCTCTGGCCCACAGAATATTCGCAAACAATGTTCTC
ATGGAGCTCGAAAATGTGGTTTGGAAAGTCCCATTTATTCAATTGATATCTCACCCCACATGGAATTCTCGAAAATCTTCGTGGACGTTTTTCATAGAAGTTCCCCGGTC
CATACTTCATCCTAATAGCGTTTCATCAGACAGTCGGATGAATCATGTAACCAAATCACAATTTCAGACTAAAGTGGTTGTAAATGATGATTGCATCACTCTTGAAGGGG
AAGGTGCTCCCAATGTCGTTGGCTTGTTCAAGGGAAATTCCAAGGACATCTATTCGATGAACAGATATGGCTGTGACTTGGCTGATCTTCCTGTTACAATTCTGCTGCAG
GTTGCAAGCCAAATTGTTCTTTGGCTTCACGAAGAAGCTCTAACCTGGGGAATAAAGGCGAATCGTGACTTCCTAAGTCTCTCGTTTGAGCTAGAACAGGGAGAAACACT
CCGGCTGGTAGCCCATGTGGACCCAGAAGATGCTCAAGGATACCTTTCTTGGTGGTTGGTAATGGACGATGGCTTGATGGAGGACAGGAAACTTAATTTTGACATTTCAG
ATGTTGTACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTGGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGCAGTGGATTTGGTGGTAGCCTATAA

mRNA sequence

Show/hide mRNA sequence

GACAAATAAGTCATTTAAGTTCCGACTCCGACTTCTCTGTCAGTGGAGTCTCATCCCGATCTCCGACATCTCTTCCGTTCTAGGGTTCGCTCCAAATCTCTTCTTCCCTT
CCGGCAGAATCAGCCATTACTGTGTGAAAATGGACGGCGACATGGAAGTTTCCCTCGACAAGCTTCCCATCAAGCGCTTGGAGTCCATAGAGGAAAACGGCCTCGAGCGA
TTCCCATCAGATGTAGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATTGAGAAGGACGATGAAAAAAAGAAGCAGAAGAAGAGCTC
TAAGGAGAGTTCAACTCCTTGGCCATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTCATCAATACCGTGGAAGCTAATG
ATGCAGTAACGGTTGCAGGGATGACAAGGCCAAAACTATTACCTAATGAAGCTTTATCTGATCTTGGAGTGTCTGTAGCAACGAAACTGCAATGCTTTCGACATCTTAGT
AAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGTCAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTCTTATTCGATTGCAGCAAAATTGGAAGGTTAAAAGACAGCG
AGTGGCTGCTGCTCCAGCTCCTGCAAACGAAGGCTTTACCATTGATTTATTTGACAATTCATCATGTGACCCGTTGGCTGTGTTTCGACCGTCTTCATCTACAATTCGTG
TTGAGCATGATTCATCTGGAATGCTGACCATTAATTTGCCTCCAAATTCATGTCACTCCCTTCGTTTCGGATTTCTCAGTGGATCTAATGTAGAAAATCCTCTGGAGCGT
GGTAAAAATGAGTCCACAAATTCATCCAATCAGTCTACAATTAAGAGTGAGAAGGAATTTCCAAATGACAATGAGTACATTAAGGAAACAAACTCACTTCTCCGTGAAGT
TCACCATGCCATTTTTAGTGAGCAGGTGTTTGATTTGGTGAACCGTGAAGCATTCAATCCATCATTAGGTATCAATGTCACTGGCATACGAGAAAATTACTTGCAATTAA
GTATCGATCAGGGTACCTCGGTCTTCATCTCTCTTGTTCCGTCTAGTCAAAGTTGCCAAACAGTTGAAGGTGCAAATACAAAGATTTTGGATGATACAAATTTACCTTTT
GATTCACTTGATGGGATTGAATTACCAGATAGAAGTGACCCCCTTGAAAAGAAATTGCGGAATCCTAATCATACAACATTTGAGATATATCTGCAACACATTTTCCATGA
GCTAGTGTTTGTTAAATCAAACGACAGACCCATTTCTGTCTTAAGCAGGCAATCCGTTCAACATTCTAATGATGGATCTGGGCTTCTTGGTCATTTCTGTTTGTCTCTGG
CCCACAGAATATTCGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAAGTCCCATTTATTCAATTGATATCTCACCCCACATGGAATTCTCGAAAATCTTCG
TGGACGTTTTTCATAGAAGTTCCCCGGTCCATACTTCATCCTAATAGCGTTTCATCAGACAGTCGGATGAATCATGTAACCAAATCACAATTTCAGACTAAAGTGGTTGT
AAATGATGATTGCATCACTCTTGAAGGGGAAGGTGCTCCCAATGTCGTTGGCTTGTTCAAGGGAAATTCCAAGGACATCTATTCGATGAACAGATATGGCTGTGACTTGG
CTGATCTTCCTGTTACAATTCTGCTGCAGGTTGCAAGCCAAATTGTTCTTTGGCTTCACGAAGAAGCTCTAACCTGGGGAATAAAGGCGAATCGTGACTTCCTAAGTCTC
TCGTTTGAGCTAGAACAGGGAGAAACACTCCGGCTGGTAGCCCATGTGGACCCAGAAGATGCTCAAGGATACCTTTCTTGGTGGTTGGTAATGGACGATGGCTTGATGGA
GGACAGGAAACTTAATTTTGACATTTCAGATGTTGTACCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTGGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTT
TGTGCAGTGGATTTGGTGGTAGCCTATAAACCCCATGCTCACTTTCTGGTATTTACAATCAGAAAATTGCATTATGTTCTTGTATTTTCTGCCTCAAATCTAATGAAATC
TTCAATTTTTGTCCCCTTTGCTTACTCAACCTCATATATTATTTTTATGTACCATTCCAAGTAGTAAAGGTGGGCCCTGCATGACCTGGATGGTTTGAAGCTGACTTCAA
GAGGAAGAGCCCTTTGGAAAACCTCATCTTCTAGTGAGTACTCACTTAAAATTGAATGATCTCGATTTGATTTGTACTTGAAATTAATTGATCTCTAATCAGCTAATTAG
TAAACTTTCTTGTGGTGATTTTGGCTCATTTTCATGTGTTTAAAAGGACATGGG

Protein sequence

Show/hide protein sequence

MDGDMEVSLDKLPIKRLESIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQKKSSKESSTPWPWQNMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTR
PKLLPNEALSDLGVSVATKLQCFRHLSKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAAPAPANEGFTIDLFDNSSCDPLAVFRPSSSTIRVEHDSSGMLT
INLPPNSCHSLRFGFLSGSNVENPLERGKNESTNSSNQSTIKSEKEFPNDNEYIKETNSLLREVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFI
SLVPSSQSCQTVEGANTKILDDTNLPFDSLDGIELPDRSDPLEKKLRNPNHTTFEIYLQHIFHELVFVKSNDRPISVLSRQSVQHSNDGSGLLGHFCLSLAHRIFANNVL
MELENVVWKVPFIQLISHPTWNSRKSSWTFFIEVPRSILHPNSVSSDSRMNHVTKSQFQTKVVVNDDCITLEGEGAPNVVGLFKGNSKDIYSMNRYGCDLADLPVTILLQ
VASQIVLWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDAQGYLSWWLVMDDGLMEDRKLNFDISDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGFGGSL

Sed0002176 (gene) of Chayote v1 genome