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Sed0002191 (gene) of Chayote v1 genome

Gene IDSed0002191
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:20712185..20712556
RNA-Seq ExpressionSed0002191
SyntenySed0002191
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646857.1 hypothetical protein Csa_020829, partial [Cucumis sativus]4.6e-2159.38Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIA
        MNQ  ++  EISEAR  EAQ G I RLTQV+N L+DRL+R+EVAL N  QG+  N   EGVENE+ EDN  LLA  N RG RVLG+G R  RR GR+++ 
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIA

Query:  PRRVERENQ----YERGVEGVKLKILTF
         RRVERE Q     ERG+ GVKLKI TF
Subjt:  PRRVERENQ----YERGVEGVKLKILTF

XP_022925325.1 uncharacterized protein LOC111432615 [Cucurbita moschata]4.3e-1956.9Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP
        MNQD  +G EI+EARWREAQ G I RL QV+++L+DR+ER+++ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR +GRG     RG       
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP

Query:  RRVERENQYERGVEGV
        RR E   QYE  +E V
Subjt:  RRVERENQYERGVEGV

XP_022929948.1 uncharacterized protein LOC111436410 [Cucurbita moschata]1.0e-1766.67Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGR
        MNQDG +G EI+EARWREAQ G I  L QV+++L+DR+ER+E+ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGR

XP_023534142.1 uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo]3.7e-3166.14Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP
        MNQDG +G EI+EARWREAQ G I RL QV+++L+DR+ER+E+ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR +GRG    RR GREI+AP
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP

Query:  RRVERENQYER----GVEGVKLKILTF
        +R+ERE QYER    GV GVKLKI TF
Subjt:  RRVERENQYER----GVEGVKLKILTF

XP_038888883.1 uncharacterized protein LOC120078660 [Benincasa hispida]5.0e-2059.06Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP
        M+Q   D  E SEAR+REAQ GVI RLT+VV SL DR+ERMEVAL NPQ  E   N E  +NE+ +DN  LL G N RG  VLGRG   GRR  R I+ P
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP

Query:  RRVERENQYERGVE----GVKLKILTF
        R VERE Q ERG E    GVKL I TF
Subjt:  RRVERENQYERGVE----GVKLKILTF

TrEMBL top hitse value%identityAlignment
A0A0A0KC00 Uncharacterized protein2.1e-1656.25Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIA
        MN+  ++  +ISEA+  EAQ G I RLTQV+N L++RL+RMEVAL N  QG   N   EGVENE+ EDN   LAG NPRG RVLG+G R  RR  R ++ 
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIA

Query:  PRRVERENQYER
         RRVE E+Q ER
Subjt:  PRRVERENQYER

A0A0A0L0S3 Uncharacterized protein1.1e-0959.04Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRV
        MNQ  ++  EISEAR  EAQ G I RLTQV+N L+DRL+RM VAL N  QG   N   EGVENE  EDN  LLA  NP   RV
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRV

A0A5A7UDQ9 Uncharacterized protein9.0e-0752.27Show/hide
Query:  MEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAPRRVERENQYER----GVEGVKLKILTF
        M+VAL N  QG   N   EGVEN++ EDN  +L G NP+G RVLG+  R  RR G  ++  RRVERE + ER    G+ GVKL ILTF
Subjt:  MEVALGN-PQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAPRRVERENQYER----GVEGVKLKILTF

A0A6J1EHL9 uncharacterized protein LOC1114326152.1e-1956.9Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP
        MNQD  +G EI+EARWREAQ G I RL QV+++L+DR+ER+++ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR +GRG     RG       
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAP

Query:  RRVERENQYERGVEGV
        RR E   QYE  +E V
Subjt:  RRVERENQYERGVEGV

A0A6J1ETN1 uncharacterized protein LOC1114364105.1e-1866.67Show/hide
Query:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGR
        MNQDG +G EI+EARWREAQ G I  L QV+++L+DR+ER+E+ALGN QGRE   N EGVENE+ +DNV LLAG++PRGGR
Subjt:  MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAAGATGGGAGAGATGGAGAGGAGATTAGTGAAGCTAGGTGGAGAGAAGCTCAAAGTGGGGTCATTAATCGTTTAACTCAAGTTGTTAATTCCTTAAGCGATAG
GTTGGAGCGAATGGAAGTAGCTTTAGGAAATCCTCAAGGGAGGGAGGATAACTTTAATTATGAAGGAGTTGAAAATGAAGATGGAGAAGATAATGTTAACCTCTTAGCGG
GATACAATCCACGGGGAGGGAGAGTTTTAGGTCGAGGGGGACGAGGAGGAAGAAGAGGGGGTAGGGAAATTATAGCACCTAGAAGGGTCGAAAGGGAGAACCAATATGAA
AGAGGAGTAGAGGGAGTAAAGCTTAAAATTCTTACTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAAGATGGGAGAGATGGAGAGGAGATTAGTGAAGCTAGGTGGAGAGAAGCTCAAAGTGGGGTCATTAATCGTTTAACTCAAGTTGTTAATTCCTTAAGCGATAG
GTTGGAGCGAATGGAAGTAGCTTTAGGAAATCCTCAAGGGAGGGAGGATAACTTTAATTATGAAGGAGTTGAAAATGAAGATGGAGAAGATAATGTTAACCTCTTAGCGG
GATACAATCCACGGGGAGGGAGAGTTTTAGGTCGAGGGGGACGAGGAGGAAGAAGAGGGGGTAGGGAAATTATAGCACCTAGAAGGGTCGAAAGGGAGAACCAATATGAA
AGAGGAGTAGAGGGAGTAAAGCTTAAAATTCTTACTTTCTGA
Protein sequenceShow/hide protein sequence
MNQDGRDGEEISEARWREAQSGVINRLTQVVNSLSDRLERMEVALGNPQGREDNFNYEGVENEDGEDNVNLLAGYNPRGGRVLGRGGRGGRRGGREIIAPRRVERENQYE
RGVEGVKLKILTF