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Sed0002192 (gene) of Chayote v1 genome

Gene IDSed0002192
OrganismSechium edule (Chayote v1)
DescriptionNAC domain-containing protein
Genome locationLG02:44249189..44249987
RNA-Seq ExpressionSed0002192
SyntenySed0002192
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652623.1 hypothetical protein Csa_013642 [Cucumis sativus]1.2e-2340.35Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWS------------VSNAFITR
        G VF PT+EEL   YLY K+  +      LP++DLYTQEPS +WQ   G+D +D + FTTL KKKSRI+RKV SNG TWS            + N  +  
Subjt:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWS------------VSNAFITR

Query:  ILNSKVASRIVLGPCT-----STLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLA--SWPPTA
        +   +     V   CT      TL+  +  E   HDSYVLC IRK+IVK+ +  + +  +  +  +WP T+
Subjt:  ILNSKVASRIVLGPCT-----STLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLA--SWPPTA

KGN65836.2 hypothetical protein Csa_019715 [Cucumis sativus]1.2e-2340.46Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRILNSKVASRIVL
        G +F PT+EEL   YLY K+         LP++DLYTQEPS +WQ   G+D QD + FTTL KKKSRI+RK+ SNG TWS  N    + + S +   ++L
Subjt:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRILNSKVASRIVL

Query:  G--------------PCT-----STLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLA--SWPPTA
        G               CT      TL+  +  E   HDSYVLC IRK+IVK+ +  + +  +  +  +WP T+
Subjt:  G--------------PCT-----STLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLA--SWPPTA

XP_008443570.1 PREDICTED: NAC domain-containing protein 105-like [Cucumis melo]1.7e-2239.67Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRILNSKVASRIVL
        G  F PTDEEL   YL+ K+  +      LP++DLY  EPS +WQ  GG+D QD + FTTL KKKSRI+RKV SNG TWS  N    R + S     ++L
Subjt:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRILNSKVASRIVL

Query:  G-------------PCTS-----------TLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLASWPPTASVPAPTQT
        G              CT            TL   +  +   HDSYVLC IRK+IVK+ +  + +  + ++S  PT S+    QT
Subjt:  G-------------PCTS-----------TLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLASWPPTASVPAPTQT

XP_011660358.2 uncharacterized protein LOC105436381 [Cucumis sativus]1.2e-2340.35Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWS------------VSNAFITR
        G VF PT+EEL   YLY K+  +      LP++DLYTQEPS +WQ   G+D +D + FTTL KKKSRI+RKV SNG TWS            + N  +  
Subjt:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWS------------VSNAFITR

Query:  ILNSKVASRIVLGPCT-----STLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLA--SWPPTA
        +   +     V   CT      TL+  +  E   HDSYVLC IRK+IVK+ +  + +  +  +  +WP T+
Subjt:  ILNSKVASRIVLGPCT-----STLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLA--SWPPTA

XP_038880323.1 NAC domain-containing protein 96-like [Benincasa hispida]8.0e-2534.9Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWS---VSNAFITRILNSKVA--
        G  F+PTDEEL   YL+ KI  D+     L ++DLY +EPS +WQ  GGIDGQD + FT L KKKSR++RKV SNGATWS    +N   + I N+ +   
Subjt:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWS---VSNAFITRILNSKVA--

Query:  -------SRIVLGPCTS------TLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSVPAPTQTLASSRP
               S++ L    S      TL      +   HDS+VLCK+R +I+K  ++ + T +Q   S+ P   +P  T+      P      P +     + 
Subjt:  -------SRIVLGPCTS------TLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSVPAPTQTLASSRP

Query:  TTSMEVYDQNHPIPAEMENYDPNMTFTEDEIRQLLVHMDLK-PVVQENRVPPSNL
           +E       I  E +       FTED+I+QL+   +L+ P +QE+ + P N+
Subjt:  TTSMEVYDQNHPIPAEMENYDPNMTFTEDEIRQLLVHMDLK-PVVQENRVPPSNL

TrEMBL top hitse value%identityAlignment
A0A1S3B8F1 NAC domain-containing protein 105-like8.1e-2339.67Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRILNSKVASRIVL
        G  F PTDEEL   YL+ K+  +      LP++DLY  EPS +WQ  GG+D QD + FTTL KKKSRI+RKV SNG TWS  N    R + S     ++L
Subjt:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRILNSKVASRIVL

Query:  G-------------PCTS-----------TLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLASWPPTASVPAPTQT
        G              CT            TL   +  +   HDSYVLC IRK+IVK+ +  + +  + ++S  PT S+    QT
Subjt:  G-------------PCTS-----------TLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLASWPPTASVPAPTQT

A0A5A7UPM7 NAC domain-containing protein 105-like protein4.4e-2140.13Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRIL----------
        G  F PTDEEL   YLY KI  D+     LP++D+YTQEP  +W+  GG++G+D   FTTL K+KSRI+RKV SNGA WS   +  T++           
Subjt:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRIL----------

Query:  ------NSKVASRIVLGPCTS---------TLSIRLCTERKAHDSYVLCKIRKRIVK
              NSK+     +  C +         TL   L  +   HDS+VLC +RK+I+K
Subjt:  ------NSKVASRIVLGPCTS---------TLSIRLCTERKAHDSYVLCKIRKRIVK

A0A5D3BHG6 NAC domain-containing protein 105-like protein4.4e-2140.13Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRIL----------
        G  F PTDEEL   YLY KI  D+     LP++D+YTQEP  +W+  GG++G+D   FTTL K+KSRI+RKV SNGA WS   +  T++           
Subjt:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRIL----------

Query:  ------NSKVASRIVLGPCTS---------TLSIRLCTERKAHDSYVLCKIRKRIVK
              NSK+     +  C +         TL   L  +   HDS+VLC +RK+I+K
Subjt:  ------NSKVASRIVLGPCTS---------TLSIRLCTERKAHDSYVLCKIRKRIVK

A0A6J1F2C3 NAC domain-containing protein 12-like1.3e-2038.92Show/hide
Query:  YGIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATW-----------SVSNAFITR
        +G  FAPTDEEL   YL+ KI  D   S +LP++D+Y+ EP+++WQ  GG++ +D + FTTL KKKSRI+RKV  NG TW           S +NA I  
Subjt:  YGIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATW-----------SVSNAFITR

Query:  I------------LNSKVASRIVLGPCTSTLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSVPAPTQT
        I             N    S I+      TL   + T    HDSYV+C IRKRI+K VR  V + +Q     P   + P  TQT A      +   P Q 
Subjt:  I------------LNSKVASRIVLGPCTSTLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSVPAPTQT

Query:  LAS
        + S
Subjt:  LAS

A0A6J1F881 NAC domain-containing protein 96-like2.9e-2041.18Show/hide
Query:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRILNSKVASRIVL
        G VF PTD+ELF+ YL+ KI  + +  + LP+VDLY++EPS+LWQ +GGID Q    FT L KKKSR++RKV SNG TWS  +A +   + S   + I+L
Subjt:  GIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRILNSKVASRIVL

Query:  GP-----------------CT-----STLSIRLCTERKAHDSYVLCKIRKRIV
        G                  C+      T++  L      HD +V CKIR +I+
Subjt:  GP-----------------CT-----STLSIRLCTERKAHDSYVLCKIRKRIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAATCATAATGTACCGTCAGTACGGCATCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTGCTGAGGATTACAATGGTTC
ATTTACTCTACCCATGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCAACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCAACAAGA
AGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCTT
GGACCATGTACGAGTACACTCTCGATCCGCCTTTGTACCGAAAGGAAAGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAGCAGTGAGGAAAGG
AGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAGCATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCCCGGCCTACAACATCAGTTCCAGCACCAA
CACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTATACGACCAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGAG
GATGAAATTAGACAACTTCTAGTTCATATGGATTTGAAACCGGTTGTGCAGGAGAATCGTGTACCACCATCCAATTTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAAATCATAATGTACCGTCAGTACGGCATCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTGCTGAGGATTACAATGGTTC
ATTTACTCTACCCATGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCAACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCAACAAGA
AGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCTT
GGACCATGTACGAGTACACTCTCGATCCGCCTTTGTACCGAAAGGAAAGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAGCAGTGAGGAAAGG
AGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAGCATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCCCGGCCTACAACATCAGTTCCAGCACCAA
CACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTATACGACCAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGAG
GATGAAATTAGACAACTTCTAGTTCATATGGATTTGAAACCGGTTGTGCAGGAGAATCGTGTACCACCATCCAATTTGAAGTAA
Protein sequenceShow/hide protein sequence
MDQIIMYRQYGIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRILNSKVASRIVL
GPCTSTLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSVPAPTQTLASSRPTTSMEVYDQNHPIPAEMENYDPNMTFTE
DEIRQLLVHMDLKPVVQENRVPPSNLK