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Sed0002197 (gene) of Chayote v1 genome

Gene IDSed0002197
OrganismSechium edule (Chayote v1)
Descriptionbet1-like SNARE 1-1
Genome locationLG05:570414..573428
RNA-Seq ExpressionSed0002197
SyntenySed0002197
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain
IPR039897 - BET1-like protein
IPR039899 - BET1, SNARE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151976.1 bet1-like SNARE 1-1 [Cucumis sativus]2.0e-5695.93Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRAS SYSSHEIEEHDN+AAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFV IFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

XP_008454511.1 PREDICTED: bet1-like SNARE 1-1 [Cucumis melo]4.4e-5695.12Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRAS SY+SHEIEEHDN+AAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFV IFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

XP_022146012.1 bet1-like SNARE 1-1 [Momordica charantia]4.4e-5695.12Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRE+RNNRV+LFDGIEEGGVRASSS+SSHEIEEHDN+AAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

XP_022963635.1 bet1-like SNARE 1-1 [Cucurbita moschata]2.1e-5898.37Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRASSSYSSHEIEEHDN+AALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

XP_038887294.1 bet1-like SNARE 1-1 [Benincasa hispida]6.7e-5796.75Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRASSSYSSHEIEEHDN+AAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

TrEMBL top hitse value%identityAlignment
A0A0A0LBA5 t-SNARE coiled-coil homology domain-containing protein9.5e-5795.93Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRAS SYSSHEIEEHDN+AAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFV IFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

A0A5A7VLV2 Bet1-like SNARE 1-12.1e-5695.12Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRAS SY+SHEIEEHDN+AAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFV IFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

A0A6J1CYB1 bet1-like SNARE 1-12.1e-5695.12Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRE+RNNRV+LFDGIEEGGVRASSS+SSHEIEEHDN+AAL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

A0A6J1HIJ8 bet1-like SNARE 1-11.0e-5898.37Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRASSSYSSHEIEEHDN+AALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

A0A6J1HRZ5 bet1-like SNARE 1-11.0e-5898.37Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRASSSYSSHEIEEHDN+AALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
        RPKMFSLVALFVAIFFIVYYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

SwissProt top hitse value%identityAlignment
O35152 BET1-like protein2.5e-0635Show/hide
Query:  RASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTV--FDPKSRPKMFSLVALFVAIFFIVYYL
        RA SS +  EI + +N      L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF TV      +R  +  +  + +  FFI+ YL
Subjt:  RASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTV--FDPKSRPKMFSLVALFVAIFFIVYYL

Q3MHP8 BET1-like protein1.6e-0535.92Show/hide
Query:  RASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSRPKMFSLVA--LFVAIFFIVYY
        RA S  +  EI + +N      L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF T+    +   K+   VA  L VA F + Y 
Subjt:  RASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSRPKMFSLVA--LFVAIFFIVYY

Query:  LTR
        L+R
Subjt:  LTR

Q5RBX2 BET1-like protein5.6e-0634.95Show/hide
Query:  RASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSRPKMF--SLVALFVAIFFIVYY
        RA S  +  EI + +N      L  +V  LK L  DI+++ E  NR LD M +D  S  G+L+G++ RF T+    +   K+     V L VA F + Y+
Subjt:  RASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSRPKMF--SLVALFVAIFFIVYY

Query:  LTR
        L+R
Subjt:  LTR

Q94CG2 Bet1-like SNARE 1-22.7e-3260.32Show/hide
Query:  MNARRELRNNRVSLF---DGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD
        MN RRE R +R SLF   DG+EEG +RASSSY+    +E DND AL  LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+
Subjt:  MNARRELRNNRVSLF---DGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD

Query:  PKSRPKMFSLVALFVAIFFIVYYLTR
         KS  K   L+A FV +F I+YYL R
Subjt:  PKSRPKMFSLVALFVAIFFIVYYLTR

Q9M2J9 Bet1-like SNARE 1-11.8e-4474.8Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MN RRE R  R SLFDGIEEGG+RA+SSY SHEI EH+N+ AL GLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
          +M +LVA FV +F ++YYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

Arabidopsis top hitse value%identityAlignment
AT3G58170.1 BET1P/SFT1P-like protein 14A1.3e-4574.8Show/hide
Query:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MN RRE R  R SLFDGIEEGG+RA+SSY SHEI EH+N+ AL GLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KS
Subjt:  MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  RPKMFSLVALFVAIFFIVYYLTR
          +M +LVA FV +F ++YYLTR
Subjt:  RPKMFSLVALFVAIFFIVYYLTR

AT4G14455.1 Target SNARE coiled-coil domain protein1.9e-3360.32Show/hide
Query:  MNARRELRNNRVSLF---DGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD
        MN RRE R +R SLF   DG+EEG +RASSSY+    +E DND AL  LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+
Subjt:  MNARRELRNNRVSLF---DGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD

Query:  PKSRPKMFSLVALFVAIFFIVYYLTR
         KS  K   L+A FV +F I+YYL R
Subjt:  PKSRPKMFSLVALFVAIFFIVYYLTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCGAGAAGGGAACTGCGCAACAATAGGGTTTCTCTATTCGATGGCATTGAGGAGGGCGGTGTTAGGGCCTCATCCTCATACTCCTCCCATGAAATTGAGGAGCA
TGATAATGATGCAGCATTGGGAGGCTTGCAAGACAGAGTCCTCCTTCTGAAAAGGTTGACAGGTGACATAAATGAGGAGGTGGAGAGTCATAACCGCATGCTGGATCGGA
TGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCGGGCACAATGGATCGATTCAAGACGGTATTTGATCCAAAGTCGAGGCCAAAGATGTTCTCACTAGTCGCACTT
TTCGTGGCAATTTTCTTCATCGTGTACTATCTCACAAGGTAA
mRNA sequenceShow/hide mRNA sequence
TATATTTCGGGTAAGAATTGTTTTTTTTCCCCTATTTATAAATATAATTTCAATAAACAATTTGAGTATTTATCATAGTCTCCGATCGTCTCTGTGTCACCGTTCCCGGT
CCCGTCGCTCCGATAATCGGATTGCGCCTATACAACAGATCGATTGCCAATTAGGGTTCACCGCCGAAGCTTTTTCGTCCCCAGAGAGCCATGAACGCGAGAAGGGAACT
GCGCAACAATAGGGTTTCTCTATTCGATGGCATTGAGGAGGGCGGTGTTAGGGCCTCATCCTCATACTCCTCCCATGAAATTGAGGAGCATGATAATGATGCAGCATTGG
GAGGCTTGCAAGACAGAGTCCTCCTTCTGAAAAGGTTGACAGGTGACATAAATGAGGAGGTGGAGAGTCATAACCGCATGCTGGATCGGATGGGTAATGATATGGATTCA
TCAAGAGGAGTGTTGTCGGGCACAATGGATCGATTCAAGACGGTATTTGATCCAAAGTCGAGGCCAAAGATGTTCTCACTAGTCGCACTTTTCGTGGCAATTTTCTTCAT
CGTGTACTATCTCACAAGGTAATCCTGCTGTTTGGGTATCGAAAGACCTCGCTTGAGCTTCGCCTGTGGATGGAAGACAATGAATCAGTATTGCTGCTTAGTATTCTATC
AGTATTACTTGTAACTTGGGCATAGATGTTGTGTTGATGATGCCTGTGTGAATATGTTTTCCTTGGTACCAAATTAAAGTTGGGATGTGTTTGAAACTAAAATTCCATCT
GCTGCTCGCTGACATTGATGGAGTTTTATCTAATCAGCAAACCAGTTTGTTATCTGAGAG
Protein sequenceShow/hide protein sequence
MNARRELRNNRVSLFDGIEEGGVRASSSYSSHEIEEHDNDAALGGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSRPKMFSLVAL
FVAIFFIVYYLTR