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Sed0002245 (gene) of Chayote v1 genome

Gene IDSed0002245
OrganismSechium edule (Chayote v1)
DescriptionNuclear transport factor 2 (NTF2) family protein
Genome locationLG07:37266122..37269387
RNA-Seq ExpressionSed0002245
SyntenySed0002245
Gene Ontology termsNA
InterPro domainsIPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601231.1 Exocyst complex component EXO70A1, partial [Cucurbita argyrosperma subsp. sororia]3.4e-8884.65Show/hide
Query:  RNLEQS-QTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLS
        R LE S +TTLAP SLLFLKMLGDGEI ED  +EA  K A D K+TKRFADD MPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLS
Subjt:  RNLEQS-QTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLS

Query:  KVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFG
        KVFSESRIVEY+VKE+ ISP K EI VD KQ+YKFLGR+IDLESLIKLYV+EGKIVRHEDWWNKKPLLNRET+ LPMVGRVLEM+RRC MLATHAMM FG
Subjt:  KVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFG

Query:  KD
        KD
Subjt:  KD

XP_004135041.1 uncharacterized protein LOC101206496 isoform X2 [Cucumis sativus]1.3e-8276.15Show/hide
Query:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT
        M +WR R  VLL    N  + + Q +L   SLLFLKM G GEI  D  +EA  K A D K+TKR ADD MPHILNLYGSSATPRDFEIYA DASFEDPLT
Subjt:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT

Query:  RAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEM
        RAHGVKEIKSAFYSLSKVFSESRIVEY   E  ISP K EI VD KQ+YKFLGR+IDLESLIKLYVVEGKIVRHEDWWNKKPLLNRET+ LPMVGR LEM
Subjt:  RAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEM

Query:  SRRCTMLATHAMMGFGKD
        +RRC MLATHAMMGFGKD
Subjt:  SRRCTMLATHAMMGFGKD

XP_008446746.1 PREDICTED: uncharacterized protein LOC103489375 isoform X2 [Cucumis melo]7.3e-8376.61Show/hide
Query:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT
        M +WR R  VLL    N  + + Q +L   SLLFLKM GDGEI  D  +EA  K A D K+TKR ADD MPHILNLYGSSATPRDFEIYA DASF+DPLT
Subjt:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT

Query:  RAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEM
        RA+GVKEIKSAFYSLSKVFSESRIVEY  KE  ISP K EIIVD KQ+YKFLGR+IDLESLIKLYVVEGKIVRHEDWWNKKPLLNRET+ LPMVGR LEM
Subjt:  RAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEM

Query:  SRRCTMLATHAMMGFGKD
        +RR TMLATHAMMGFGKD
Subjt:  SRRCTMLATHAMMGFGKD

XP_016900182.1 PREDICTED: uncharacterized protein LOC103489375 isoform X1 [Cucumis melo]1.2e-8073.89Show/hide
Query:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT
        M +WR R  VLL    N  + + Q +L   SLLFLKM GDGEI  D  +EA  K A D K+TKR ADD MPHILNLYGSSATPRDFEIYA DASF+DPLT
Subjt:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT

Query:  RAHG--------VKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLP
        RA+G        VKEIKSAFYSLSKVFSESRIVEY  KE  ISP K EIIVD KQ+YKFLGR+IDLESLIKLYVVEGKIVRHEDWWNKKPLLNRET+ LP
Subjt:  RAHG--------VKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLP

Query:  MVGRVLEMSRRCTMLATHAMMGFGKD
        MVGR LEM+RR TMLATHAMMGFGKD
Subjt:  MVGRVLEMSRRCTMLATHAMMGFGKD

XP_022957109.1 uncharacterized protein LOC111458589 [Cucurbita moschata]1.8e-8185.71Show/hide
Query:  MLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISP
        MLGDGEI ED  +EA  K A D K+TKRFADD MPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+VKE+ ISP
Subjt:  MLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISP

Query:  RKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD
         K EI VD KQ+YKFLGR+IDLESLIKLYV+EGKIVRHEDWWNKKPLLNRET+ LPMVGRVLEM+RRC MLATHAMM FGKD
Subjt:  RKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD

TrEMBL top hitse value%identityAlignment
A0A0A0KUR1 Uncharacterized protein6.1e-8376.15Show/hide
Query:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT
        M +WR R  VLL    N  + + Q +L   SLLFLKM G GEI  D  +EA  K A D K+TKR ADD MPHILNLYGSSATPRDFEIYA DASFEDPLT
Subjt:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT

Query:  RAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEM
        RAHGVKEIKSAFYSLSKVFSESRIVEY   E  ISP K EI VD KQ+YKFLGR+IDLESLIKLYVVEGKIVRHEDWWNKKPLLNRET+ LPMVGR LEM
Subjt:  RAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEM

Query:  SRRCTMLATHAMMGFGKD
        +RRC MLATHAMMGFGKD
Subjt:  SRRCTMLATHAMMGFGKD

A0A1S3BFU1 uncharacterized protein LOC103489375 isoform X23.6e-8376.61Show/hide
Query:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT
        M +WR R  VLL    N  + + Q +L   SLLFLKM GDGEI  D  +EA  K A D K+TKR ADD MPHILNLYGSSATPRDFEIYA DASF+DPLT
Subjt:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT

Query:  RAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEM
        RA+GVKEIKSAFYSLSKVFSESRIVEY  KE  ISP K EIIVD KQ+YKFLGR+IDLESLIKLYVVEGKIVRHEDWWNKKPLLNRET+ LPMVGR LEM
Subjt:  RAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEM

Query:  SRRCTMLATHAMMGFGKD
        +RR TMLATHAMMGFGKD
Subjt:  SRRCTMLATHAMMGFGKD

A0A1S4DW20 uncharacterized protein LOC103489375 isoform X15.7e-8173.89Show/hide
Query:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT
        M +WR R  VLL    N  + + Q +L   SLLFLKM GDGEI  D  +EA  K A D K+TKR ADD MPHILNLYGSSATPRDFEIYA DASF+DPLT
Subjt:  MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLT

Query:  RAHG--------VKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLP
        RA+G        VKEIKSAFYSLSKVFSESRIVEY  KE  ISP K EIIVD KQ+YKFLGR+IDLESLIKLYVVEGKIVRHEDWWNKKPLLNRET+ LP
Subjt:  RAHG--------VKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLP

Query:  MVGRVLEMSRRCTMLATHAMMGFGKD
        MVGR LEM+RR TMLATHAMMGFGKD
Subjt:  MVGRVLEMSRRCTMLATHAMMGFGKD

A0A6J1H109 uncharacterized protein LOC1114585898.8e-8285.71Show/hide
Query:  MLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISP
        MLGDGEI ED  +EA  K A D K+TKRFADD MPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+VKE+ ISP
Subjt:  MLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISP

Query:  RKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD
         K EI VD KQ+YKFLGR+IDLESLIKLYV+EGKIVRHEDWWNKKPLLNRET+ LPMVGRVLEM+RRC MLATHAMM FGKD
Subjt:  RKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD

A0A6J1JHF8 uncharacterized protein LOC1114843822.2e-8084.07Show/hide
Query:  MLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISP
        M GDGEI ED  +EA  K A D K+TKRFADD MPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+VKE+ ISP
Subjt:  MLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISP

Query:  RKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD
         K EI VD KQ+YKFLGR+IDLESLIKLYV+EGK++RHEDWWNKKPLLNRET+ LPMVGRVLEM+RRC MLATHAMM FGKD
Subjt:  RKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G04830.1 Nuclear transport factor 2 (NTF2) family protein2.3e-6668.79Show/hide
Query:  DRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDC
        D A E  GKGA + KS KRFAD  MPH+LNLYGSSA   DF++YA +ASFEDPLT A GVK+IKSAFYSL KVF ES+IVEY ++E   SP K+EI++D 
Subjt:  DRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDC

Query:  KQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD
        KQ+YK +GR+ID+ SLIKLYV +GKIVRHEDWW+KKPL NR+T++ P+VGRV+EM RR  MLATHAMMGFGKD
Subjt:  KQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD

AT5G04830.2 Nuclear transport factor 2 (NTF2) family protein2.3e-6668.79Show/hide
Query:  DRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDC
        D A E  GKGA + KS KRFAD  MPH+LNLYGSSA   DF++YA +ASFEDPLT A GVK+IKSAFYSL KVF ES+IVEY ++E   SP K+EI++D 
Subjt:  DRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDC

Query:  KQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD
        KQ+YK +GR+ID+ SLIKLYV +GKIVRHEDWW+KKPL NR+T++ P+VGRV+EM RR  MLATHAMMGFGKD
Subjt:  KQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGTGGAGGTTCAGGCATCTGGTTCTGCTTGGTTCGCCGAGAAATTTGGAACAATCTCAAACCACACTCGCTCCGGCTTCATTGCTGTTCTTGAAAATGCTAGG
CGATGGCGAGATCATGGAGGATCGAGCGATGGAGGCGTACGGCAAGGGAGCCAACGATTTCAAATCCACCAAGCGTTTTGCCGATGATTTCATGCCTCACATCCTTAATC
TGTATGGATCTTCTGCAACGCCTCGGGATTTCGAGATCTACGCTGCTGATGCTTCGTTCGAGGATCCGCTCACGCGTGCTCACGGAGTGAAGGAAATCAAATCGGCATTT
TACTCTCTGTCTAAGGTCTTTAGTGAATCAAGAATTGTGGAATACACTGTCAAAGAGGAACGTATTTCACCTCGAAAACGCGAGATTATTGTCGATTGTAAGCAATACTA
TAAGTTCTTGGGGAGGGATATAGATCTGGAATCACTCATCAAGTTGTATGTCGTGGAAGGAAAAATTGTTCGTCACGAGGACTGGTGGAACAAGAAGCCACTTTTGAATA
GAGAAACAATCACATTACCGATGGTCGGTCGAGTTTTGGAAATGAGTCGAAGATGTACAATGTTAGCTACTCATGCAATGATGGGATTTGGTAAAGATTAA
mRNA sequenceShow/hide mRNA sequence
GTAGTGTATTAGCCAAAAGAGAGGGCACGTTGCGCGCCATTGAAATCGAGCTCGATGAAATTGTGGAGGTTCAGGCATCTGGTTCTGCTTGGTTCGCCGAGAAATTTGGA
ACAATCTCAAACCACACTCGCTCCGGCTTCATTGCTGTTCTTGAAAATGCTAGGCGATGGCGAGATCATGGAGGATCGAGCGATGGAGGCGTACGGCAAGGGAGCCAACG
ATTTCAAATCCACCAAGCGTTTTGCCGATGATTTCATGCCTCACATCCTTAATCTGTATGGATCTTCTGCAACGCCTCGGGATTTCGAGATCTACGCTGCTGATGCTTCG
TTCGAGGATCCGCTCACGCGTGCTCACGGAGTGAAGGAAATCAAATCGGCATTTTACTCTCTGTCTAAGGTCTTTAGTGAATCAAGAATTGTGGAATACACTGTCAAAGA
GGAACGTATTTCACCTCGAAAACGCGAGATTATTGTCGATTGTAAGCAATACTATAAGTTCTTGGGGAGGGATATAGATCTGGAATCACTCATCAAGTTGTATGTCGTGG
AAGGAAAAATTGTTCGTCACGAGGACTGGTGGAACAAGAAGCCACTTTTGAATAGAGAAACAATCACATTACCGATGGTCGGTCGAGTTTTGGAAATGAGTCGAAGATGT
ACAATGTTAGCTACTCATGCAATGATGGGATTTGGTAAAGATTAAACTATAGTCTAATTGGAATGAGGGCGTTAGGTAGAACATTATAATAGTTTCTCAATTTGGTTGTG
TTGTTAATGTATCACAGTTGATGATTGACCTAATTATCTGGTTTTTGTAATTCGTCTGGTTCTTCCTTGCCGTCATTGAGATGCTTGACGGGTGGTTTAGTTGGATCACT
ACAATAATTTTGTTCGGCTGTACGAGAAAAGGAGAATCACCAACGATCGATTCAAGTTGATATTGACATGGTGTGCCTTATTGAAACTATTCTAATAGTCGATGTTATAA
GGTGAATTAGGAAGAGAGGAAGGGAGTTGGAGGGTTTTTTTTTGTATTCTCTAGTTTGCGCAAATCTCCACTATTTTTATGAGACATATTGCTTGATATTATAGCATTTG
GATTCTTAAAAATCCATAAAAAGTTAA
Protein sequenceShow/hide protein sequence
MKLWRFRHLVLLGSPRNLEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAF
YSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD