CuGenDBv2

Gene ID	Sed0002257
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein
Genome location	LG04:44516081..44516892
RNA-Seq Expression	Sed0002257
Synteny	Sed0002257
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7023009.1 hypothetical protein SDJN02_16745, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-88

84.88

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Query:  MNETHKNS-SIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPS
        MN+ +  S SIM+SK SHPLHQIA+ PTHKLLLKQWLKEEELIF R+SLKETQIDSV+K+ITMLHIFFFVFHSTSILLLFNASAK F+G AAC RSWIPS
Subjt:  MNETHKNS-SIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPS

Query:  LCSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRI
        +CSL FSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLS+CV+ELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSRDF+TLF  SVSC+FLG+IRI
Subjt:  LCSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRI

Query:  VVCNK
        V+C+K
Subjt:  VVCNK

XP_008447121.1 PREDICTED: uncharacterized protein LOC103489644 [Cucumis melo]

2.7e-87

84.65

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Query:  NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLC
        +  +K  SIM+ K SHPLHQIA+ PTHKLLLKQWLKEEELIF RISLKETQIDSV+K+ITMLHIFFFVFHST+ILLLFNAS K F G  ACKRSWIPSLC
Subjt:  NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLC

Query:  SLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVV
        SL FSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLS+CVDELKRKG+EFDLLKEVDALRRAKSLRVE KAVRKWSSRDF+TLF  SVSC+FLGVIR+V+
Subjt:  SLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVV

Query:  CN
        CN
Subjt:  CN

XP_022147912.1 uncharacterized protein LOC111016728 [Momordica charantia]

2.1e-87

84.31

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Query:  MNETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSL
        M+E     +IM+SK  HPLHQIA+NPTHKLLLKQWLKEEELIF RISLKETQIDSV+K+ITMLHI FFVFHST+ILLLFNAS K   G AACKRSWIPSL
Subjt:  MNETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSL

Query:  CSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIV
        CSL FSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLS+CVDELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSRDF+TLF  SVSC+FLG+ RIV
Subjt:  CSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIV

Query:  VCNK
        +CNK
Subjt:  VCNK

XP_022930642.1 uncharacterized protein LOC111437043 [Cucurbita moschata]

1.6e-87

83.9

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Query:  MNETHKNS-SIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPS
        MN+ +  S SIM+SK SHPLHQIA+ PTHKLLLKQWLKEEELIF R+SLKETQIDSV+K+ITMLHIFFFVFHSTSILLLFNAS K F+G AAC RSWIPS
Subjt:  MNETHKNS-SIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPS

Query:  LCSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRI
        +CSL FSLGIIWAVRYKT++EAHLEKLLEREKEDRNLLS+CV+ELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSRDF+TLF  SVSC+FLG+IRI
Subjt:  LCSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRI

Query:  VVCNK
        V+C+K
Subjt:  VVCNK

XP_023529232.1 uncharacterized protein LOC111792131 [Cucurbita pepo subsp. pepo]

1.9e-88

84.73

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Query:  NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLC
        +  +K+ SIM+SK SHPLHQIA+ PTHKLLLKQWLKEEELIF R+SLKETQIDSV+K+ITMLHIFFFVFHSTSILLLFNASAK F+G AAC RSWIPS+C
Subjt:  NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLC

Query:  SLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVV
        SL FSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLS+CV+ELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSRDF+TLF  SVSC+FLG+IRIV+
Subjt:  SLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVV

Query:  CNK
        C+K
Subjt:  CNK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K424 Uncharacterized protein

2.9e-87

83.66

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Query:  NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLC
        +  +K  S+M+ K SHPLHQIA+ PTHKLLLKQWLKEEELIF RISLKETQIDSV+K+ITMLHIFFFVFHST+ILLLFNAS K F G  ACKRSWIPSLC
Subjt:  NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLC

Query:  SLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVV
        SL FSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLS+CVDELKRKG+EFDLLKEVDALRRAKSLRVE KAVRKWSSRDF+TLF  SVSC+FLG+IR+V+
Subjt:  SLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVV

Query:  CN
        CN
Subjt:  CN

A0A1S3BHA3 uncharacterized protein LOC103489644

1.3e-87

84.65

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Query:  NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLC
        +  +K  SIM+ K SHPLHQIA+ PTHKLLLKQWLKEEELIF RISLKETQIDSV+K+ITMLHIFFFVFHST+ILLLFNAS K F G  ACKRSWIPSLC
Subjt:  NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLC

Query:  SLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVV
        SL FSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLS+CVDELKRKG+EFDLLKEVDALRRAKSLRVE KAVRKWSSRDF+TLF  SVSC+FLGVIR+V+
Subjt:  SLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVV

Query:  CN
        CN
Subjt:  CN

A0A5A7U7C4 Putative transmembrane protein

1.3e-87

84.65

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Query:  NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLC
        +  +K  SIM+ K SHPLHQIA+ PTHKLLLKQWLKEEELIF RISLKETQIDSV+K+ITMLHIFFFVFHST+ILLLFNAS K F G  ACKRSWIPSLC
Subjt:  NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLC

Query:  SLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVV
        SL FSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLS+CVDELKRKG+EFDLLKEVDALRRAKSLRVE KAVRKWSSRDF+TLF  SVSC+FLGVIR+V+
Subjt:  SLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVV

Query:  CN
        CN
Subjt:  CN

A0A6J1D3M6 uncharacterized protein LOC111016728

1.0e-87

84.31

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Query:  MNETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSL
        M+E     +IM+SK  HPLHQIA+NPTHKLLLKQWLKEEELIF RISLKETQIDSV+K+ITMLHI FFVFHST+ILLLFNAS K   G AACKRSWIPSL
Subjt:  MNETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSL

Query:  CSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIV
        CSL FSLGIIWAVRYKTD+EAHLEKLLEREKEDRNLLS+CVDELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSRDF+TLF  SVSC+FLG+ RIV
Subjt:  CSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIV

Query:  VCNK
        +CNK
Subjt:  VCNK

A0A6J1ER49 uncharacterized protein LOC111437043

7.7e-88

83.9

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Query:  MNETHKNS-SIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPS
        MN+ +  S SIM+SK SHPLHQIA+ PTHKLLLKQWLKEEELIF R+SLKETQIDSV+K+ITMLHIFFFVFHSTSILLLFNAS K F+G AAC RSWIPS
Subjt:  MNETHKNS-SIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPS

Query:  LCSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRI
        +CSL FSLGIIWAVRYKT++EAHLEKLLEREKEDRNLLS+CV+ELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSRDF+TLF  SVSC+FLG+IRI
Subjt:  LCSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRI

Query:  VVCNK
        V+C+K
Subjt:  VVCNK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G12870.1 unknown protein

4.3e-75

70.35

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Query:  NSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGA--AACKRSWIPSLCSLF
        N  IM++K  HPLHQIA  PTHKLLLKQWLKEEELI +R+S KE+QIDSV+++IT L+IFFF+FHS S+LLLF+AS+     A  +ACKRSWIPSLC+L 
Subjt:  NSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGA--AACKRSWIPSLCSLF

Query:  FSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVVCN
         SLGIIWAVRYK+++E+HLEKLLEREKED  LL +CV+ELK+KG+EFDLLKEVDALRRAKSLRVE K V+KWS+RDFVTLF  SVSC+ L +IR+++C+
Subjt:  FSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVVCN

AT5G56120.1 unknown protein

4.1e-25

37.17

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Query:  HPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNAS----AKGFDGAAACKRSWIPSLCSLFFSLGIIWA
        HPL +I+++P H LLLK W +EE+L   R+ LKE++++S++++I  L  FF VFH     L++++S    A      A CK+ WIPS  SL  SL +++ 
Subjt:  HPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNAS----AKGFDGAAACKRSWIPSLCSLFFSLGIIWA

Query:  VRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGK-AVRKWSSRDFVTLFLVSVSCVFLGVIRIVVC
        V+ K  +   + + + RE+ D   L+RCV EL+ KG  FDL KE  + +R KS  VE K     W S+  +T+ L+  + +F  V + ++C
Subjt:  VRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGK-AVRKWSSRDFVTLFLVSVSCVFLGVIRIVVC

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAACGAAACCCACAAAAATTCATCCATCATGGACTCAAAACACTCCCACCCACTTCACCAAATCGCCCAAAATCCAACCCACAAGCTCCTCCTCAAGCAATGGCTCAA
AGAAGAAGAACTCATCTTCAACCGAATCTCCCTCAAAGAAACCCAAATCGATTCCGTCCAGAAACAGATCACAATGCTCCACATTTTCTTCTTCGTGTTCCACTCCACGT
CGATACTCCTCCTCTTCAACGCCTCGGCCAAGGGCTTCGATGGCGCTGCGGCGTGCAAGCGGTCGTGGATCCCCTCGCTCTGTTCTCTGTTTTTCTCGCTGGGGATCATC
TGGGCGGTCCGGTACAAGACCGACATGGAGGCACATTTGGAGAAGTTGCTGGAGAGGGAAAAGGAGGATCGGAATCTGCTGTCGAGGTGCGTCGATGAATTGAAGAGGAA
AGGGGTTGAGTTCGATCTGTTGAAGGAGGTCGATGCGCTGCGGCGGGCGAAGAGCTTGCGGGTTGAAGGTAAGGCCGTGAGGAAATGGTCGTCTAGAGATTTTGTTACTC
TGTTTTTGGTCTCTGTTTCGTGTGTGTTTCTTGGGGTTATTAGGATTGTTGTGTGTAATAAGTGA

mRNA sequence

Show/hide mRNA sequence

CTCCATTTTTGTTCCTCGCTGTTCCCTTTCAGTTACCCTTTTCTTCATAAAATCTCTTCGATTTCATAATCCATGAACGAAACCCACAAAAATTCATCCATCATGGACTC
AAAACACTCCCACCCACTTCACCAAATCGCCCAAAATCCAACCCACAAGCTCCTCCTCAAGCAATGGCTCAAAGAAGAAGAACTCATCTTCAACCGAATCTCCCTCAAAG
AAACCCAAATCGATTCCGTCCAGAAACAGATCACAATGCTCCACATTTTCTTCTTCGTGTTCCACTCCACGTCGATACTCCTCCTCTTCAACGCCTCGGCCAAGGGCTTC
GATGGCGCTGCGGCGTGCAAGCGGTCGTGGATCCCCTCGCTCTGTTCTCTGTTTTTCTCGCTGGGGATCATCTGGGCGGTCCGGTACAAGACCGACATGGAGGCACATTT
GGAGAAGTTGCTGGAGAGGGAAAAGGAGGATCGGAATCTGCTGTCGAGGTGCGTCGATGAATTGAAGAGGAAAGGGGTTGAGTTCGATCTGTTGAAGGAGGTCGATGCGC
TGCGGCGGGCGAAGAGCTTGCGGGTTGAAGGTAAGGCCGTGAGGAAATGGTCGTCTAGAGATTTTGTTACTCTGTTTTTGGTCTCTGTTTCGTGTGTGTTTCTTGGGGTT
ATTAGGATTGTTGTGTGTAATAAGTGAAAAGGGGGTGTTTTTATATAAATGGGATTAGGCATTTTTGTGATGCCAGGGATTTTGTTGTTGTTGTTGTTCTCTCTGCACTT
GCTTTTTGTTGATTTGTTGGTGTTATTTGGATTAAATGGCTA

Protein sequence

Show/hide protein sequence

MNETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGII
WAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVVCNK

Sed0002257 (gene) of Chayote v1 genome